RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 MAPKBP1O60336 1514 aa7.6□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 UACAQ9BZF9 1416 aa7.6□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 ABCC2Q92887 1545 aa7.59□□□□□ -1.19
RNU6ATAC28P-201ENST00000459249 EFCAB5A4FU69 1503 aa7.58□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 ABCA8O94911 1581 aa7.58□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 KDM5BQ9UGL1 1544 aa7.57□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 PLCD3Q8N3E9 789 aa7.55□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 ABCC10Q5T3U5 1492 aa7.55□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 PLB1Q6P1J6 1458 aa7.55□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 POLA2Q14181 598 aa7.54□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 ZBTB12Q9Y330 459 aaPredicted RBP7.54□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 UBTFP17480 764 aaKnown RBP7.53□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 TRHP20396 242 aaPredicted RBP7.53□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 DIP2BQ9P265 1576 aa7.53□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 ASXL2Q76L83 1435 aa7.52□□□□□ -1.2
RNU6ATAC28P-201ENST00000459249 ARHGAP35Q9NRY4 1499 aa7.52□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 ZBTB47Q9UFB7 747 aaPredicted RBP7.52□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 ZCCHC11Q5TAX3 1644 aaKnown RBP7.52□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 FHOD3Q2V2M9 1422 aa7.52□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 GLI2P10070 1586 aa7.51□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 KIF13AQ9H1H9 1805 aa7.51□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 RAPGEF6Q8TEU7 1601 aa7.51□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 FMN1Q68DA7 1419 aa7.51□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 TTBK1Q5TCY1 1321 aaPredicted RBP7.51□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 GTPBP6O43824 516 aaPredicted RBP7.5□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 MIER1Q8N108 512 aa7.5□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 CIZ1Q9ULV3 898 aaPredicted RBP7.5□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 ATP10BO94823 1461 aa7.49□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 NUP153P49790 1475 aaKnown RBP7.49□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 P3H3Q8IVL6 736 aa7.49□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 EPRSP07814 1512 aaKnown RBP7.48□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 FAM69CQ0P6D2 419 aa7.48□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 NKX1-1Q15270 411 aaPredicted RBP7.47□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 CLIP1P30622 1438 aa7.46□□□□□ -1.21
RNU6ATAC28P-201ENST00000459249 HECW1Q76N89 1606 aa7.45□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 MAP3K4Q9Y6R4 1608 aa7.45□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 RANGAP1P46060 587 aaPredicted RBP7.45□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CASKIN1Q8WXD9 1431 aa7.44□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PLEKHG5O94827 1062 aa7.44□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.44□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CFAP43Q8NDM7 1665 aa7.44□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CEP162Q5TB80 1403 aa7.44□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 TEX14Q8IWB6 1497 aa7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 FYCO1Q9BQS8 1478 aa7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 MAGI3Q5TCQ9 1506 aa7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 RYDENQ9NUL5 291 aaKnown RBP7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PPRC1Q5VV67 1664 aaKnown RBP7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CCDC18Q5T9S5 1454 aa7.43□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 ABCA9Q8IUA7 1624 aa7.42□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 BRPF1P55201 1214 aaPredicted RBP7.42□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 GSE1Q14687 1217 aa7.42□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 ZNF692Q9BU19 519 aaPredicted RBP7.42□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PCF11O94913 1555 aaKnown RBP7.42□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CD109Q6YHK3 1445 aa7.41□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 CDK13Q14004 1512 aaKnown RBP7.41□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PLEKHD1A6NEE1 506 aa7.4□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 RNF25Q96BH1 459 aaPredicted RBP7.4□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PODXL2Q9NZ53 605 aa7.4□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 SSUH2Q9Y2M2 353 aa7.4□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 PHLDB1Q86UU1 1377 aa7.4□□□□□ -1.22
RNU6ATAC28P-201ENST00000459249 TROQ12816 1431 aaPredicted RBP7.39□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 ARID3CA6NKF2 412 aa7.39□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 RIOK3O14730 519 aaKnown RBP7.39□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 CDK11AQ9UQ88 783 aaPredicted RBP7.39□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 KDM6BO15054 1643 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 NEO1Q92859 1461 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 SPDYE2BA6NHP3 402 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 SPDYE6P0CI01 402 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 SPDYE2Q495Y8 402 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 LMOD2Q6P5Q4 547 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 KCNH8Q96L42 1107 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 TSPOAP1O95153 1857 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 LRRIQ1Q96JM4 1722 aa7.38□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 ARAP3Q8WWN8 1544 aa7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 SGIP1Q9BQI5 828 aa7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 SPINK5Q9NQ38 1064 aaPredicted RBP7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 KIF14Q15058 1648 aa7.37□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 VPS8Q8N3P4 1428 aa7.36□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 TTC37Q6PGP7 1564 aa7.36□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 COL17A1Q9UMD9 1497 aaPredicted RBP7.36□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 CFAP74Q9C0B2 1584 aa7.35□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 PLCH2O75038 1416 aa7.35□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 MAP3K1Q13233 1512 aa7.34□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 VGFO15240 615 aaPredicted RBP7.34□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 ATP1B4Q9UN42 357 aaPredicted RBP7.34□□□□□ -1.23
RNU6ATAC28P-201ENST00000459249 FANCAO15360 1455 aa7.33□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 EHBP1L1Q8N3D4 1523 aa7.32□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 AKNAQ7Z591 1439 aa7.32□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 MYO5CQ9NQX4 1742 aa7.32□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 STK25O00506 426 aa7.31□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 CHRM1P11229 460 aaPredicted RBP7.31□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 TIAM1Q13009 1591 aa7.31□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 MTUS2Q5JR59 1369 aa7.31□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 PREX2Q70Z35 1606 aa7.3□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 DENND4BO75064 1496 aaPredicted RBP7.3□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 FRMPD1Q5SYB0 1578 aa7.3□□□□□ -1.24
RNU6ATAC28P-201ENST00000459249 EFCAB2Q5VUJ9 269 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms