RNA–Protein interactions for RNA: ENST00000459159.1

SNORD54-201, Transcript of small nucleolar RNA, C/D box 54, humanhuman

BASIC

Gene SNORD54, Length 67 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD54-201ENST00000459159 ZANQ9Y493 2812 aa-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 DMBT1Q9UGM3 2413 aaPredicted RBP-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 DLL1O00548 723 aa-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 ZCCHC13Q8WW36 166 aaKnown RBP-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 KRTAP4-1Q9BYQ7 146 aa-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 LAMA3Q16787 3333 aa-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 ITPR3Q14573 2671 aa-0.1□□□□□ -2.43
SNORD54-201ENST00000459159 RGS19P49795 217 aa-0.11□□□□□ -2.43
SNORD54-201ENST00000459159 SRP68Q9UHB9 627 aaKnown RBP-0.11□□□□□ -2.43
SNORD54-201ENST00000459159 CHD9Q3L8U1 2897 aa-0.11□□□□□ -2.43
SNORD54-201ENST00000459159 WDFY4Q6ZS81 3184 aa-0.11□□□□□ -2.43
SNORD54-201ENST00000459159 DNHD1Q96M86 4753 aa-0.11□□□□□ -2.43
SNORD54-201ENST00000459159 DSPP15924 2871 aaKnown RBP-0.12□□□□□ -2.43
SNORD54-201ENST00000459159 IGSF10Q6WRI0 2623 aa-0.13□□□□□ -2.43
SNORD54-201ENST00000459159 GCN1Q92616 2671 aaKnown RBP-0.13□□□□□ -2.43
SNORD54-201ENST00000459159 NAV3Q8IVL0 2385 aa-0.13□□□□□ -2.43
SNORD54-201ENST00000459159 SYNE1Q8NF91 8797 aaKnown RBP-0.13□□□□□ -2.43
SNORD54-201ENST00000459159 EVX2Q03828 476 aa-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 KRTAP21-2Q3LI59 83 aa-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 SLC4A5Q9BY07 1137 aa-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 RGS17Q9UGC6 210 aaPredicted RBP-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 BAHCC1Q9P281 2608 aa-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 CACNA1HO95180 2353 aa-0.14□□□□□ -2.43
SNORD54-201ENST00000459159 FLNCQ14315 2725 aa-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 SRRM2Q9UQ35 2752 aaKnown RBP-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 MXRA5Q9NR99 2828 aa-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 KRT1P04264 644 aa-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 TNMDQ9H2S6 317 aa-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 NBEAL1Q6ZS30 2694 aa-0.15□□□□□ -2.43
SNORD54-201ENST00000459159 EPG5Q9HCE0 2579 aa-0.16□□□□□ -2.43
SNORD54-201ENST00000459159 CACNA1BQ00975 2339 aa-0.16□□□□□ -2.43
SNORD54-201ENST00000459159 GSC2O15499 205 aa-0.16□□□□□ -2.44
SNORD54-201ENST00000459159 CAPNS1P04632 268 aa-0.16□□□□□ -2.44
SNORD54-201ENST00000459159 KRTAP2-2Q9BYT5 123 aa-0.17□□□□□ -2.44
SNORD54-201ENST00000459159 LRP2P98164 4655 aa-0.17□□□□□ -2.44
SNORD54-201ENST00000459159 FBLL1A6NHQ2 334 aaKnown RBP-0.18□□□□□ -2.44
SNORD54-201ENST00000459159 SLC34A2O95436 690 aa-0.18□□□□□ -2.44
SNORD54-201ENST00000459159 POU4F1Q01851 419 aa-0.18□□□□□ -2.44
SNORD54-201ENST00000459159 SORCS1Q8WY21 1168 aa-0.18□□□□□ -2.44
SNORD54-201ENST00000459159 IGF2RP11717 2491 aa-0.19□□□□□ -2.44
SNORD54-201ENST00000459159 CFAP46Q8IYW2 2715 aa-0.19□□□□□ -2.44
SNORD54-201ENST00000459159 TGM1P22735 817 aa-0.19□□□□□ -2.44
SNORD54-201ENST00000459159 TNXBP22105 4242 aa-0.19□□□□□ -2.44
SNORD54-201ENST00000459159 LAMA2P24043 3122 aaKnown RBP-0.19□□□□□ -2.44
SNORD54-201ENST00000459159 LRP1BQ9NZR2 4599 aa-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 FAT1Q14517 4588 aa-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 TLN1Q9Y490 2541 aaKnown RBP-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 STARD9Q9P2P6 4700 aa-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 HRNRQ86YZ3 2850 aaPredicted RBP-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 TRIOBPQ9H2D6 2365 aa-0.2□□□□□ -2.44
SNORD54-201ENST00000459159 ITPR1Q14643 2758 aa-0.21□□□□□ -2.44
SNORD54-201ENST00000459159 CEP295Q9C0D2 2601 aa-0.21□□□□□ -2.44
SNORD54-201ENST00000459159 COL9A2Q14055 689 aaPredicted RBP-0.21□□□□□ -2.44
SNORD54-201ENST00000459159 IFFO2Q5TF58 517 aa-0.21□□□□□ -2.44
SNORD54-201ENST00000459159 CELSR3Q9NYQ7 3312 aa-0.22□□□□□ -2.44
SNORD54-201ENST00000459159 EMID1Q96A84 441 aaPredicted RBP-0.22□□□□□ -2.44
SNORD54-201ENST00000459159 DNAJC5Q9H3Z4 198 aa-0.22□□□□□ -2.44
SNORD54-201ENST00000459159 MBD2Q9UBB5 411 aa-0.22□□□□□ -2.44
SNORD54-201ENST00000459159 GPR179Q6PRD1 2367 aa-0.22□□□□□ -2.44
SNORD54-201ENST00000459159 ITPR2Q14571 2701 aa-0.22□□□□□ -2.45
SNORD54-201ENST00000459159 MYO9AB2RTY4 2548 aa-0.23□□□□□ -2.45
SNORD54-201ENST00000459159 ONECUT2O95948 504 aa-0.23□□□□□ -2.45
SNORD54-201ENST00000459159 KRTAP1-5Q9BYS1 174 aa-0.23□□□□□ -2.45
SNORD54-201ENST00000459159 AVENQ9NQS1 362 aaPredicted RBP-0.23□□□□□ -2.45
SNORD54-201ENST00000459159 LRP1Q07954 4544 aaKnown RBP-0.23□□□□□ -2.45
SNORD54-201ENST00000459159 TNRC18O15417 2968 aaPredicted RBP-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 KMT2AQ03164 3969 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 APCP25054 2843 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 FAM117BQ6P1L5 589 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 FUBP1Q96AE4 644 aaKnown RBP-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 HHIPQ96QV1 700 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 DHX36Q9H2U1 1008 aaKnown RBP-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 PCDH10Q9P2E7 1040 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 WDR87Q6ZQQ6 2873 aa-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 PRRC2CQ9Y520 2896 aaKnown RBP-0.24□□□□□ -2.45
SNORD54-201ENST00000459159 FAM208BQ5VWN6 2430 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 UNC80Q8N2C7 3258 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 MYO15AQ9UKN7 3530 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 KRT38O76015 456 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 LCE1DQ5T752 114 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 DNAJC5GQ8N7S2 189 aa-0.25□□□□□ -2.45
SNORD54-201ENST00000459159 CSMD1Q96PZ7 3565 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 A0A0C4DFX4 3053 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 NF1P21359 2839 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 COL9A1P20849 921 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 KRTAP1-1Q07627 177 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 KRTAP1-3Q8IUG1 177 aa-0.26□□□□□ -2.45
SNORD54-201ENST00000459159 DCHS1Q96JQ0 3298 aa-0.27□□□□□ -2.45
SNORD54-201ENST00000459159 OTOGLQ3ZCN5 2332 aa-0.27□□□□□ -2.45
SNORD54-201ENST00000459159 TAF15Q92804 592 aaKnown RBP eCLIP-0.27□□□□□ -2.45
SNORD54-201ENST00000459159 MAP1AP78559 2803 aaPredicted RBP-0.27□□□□□ -2.45
SNORD54-201ENST00000459159 HSPG2P98160 4391 aa-0.27□□□□□ -2.45
SNORD54-201ENST00000459159 PRB4P10163 310 aaPredicted RBP-0.28□□□□□ -2.45
SNORD54-201ENST00000459159 LCE4AQ5TA78 99 aa-0.28□□□□□ -2.45
SNORD54-201ENST00000459159 LYSTQ99698 3801 aa-0.28□□□□□ -2.45
SNORD54-201ENST00000459159 PIEZO2Q9H5I5 2752 aa-0.28□□□□□ -2.45
SNORD54-201ENST00000459159 LAMA5O15230 3695 aa-0.28□□□□□ -2.45
SNORD54-201ENST00000459159 MYCBP2O75592 4640 aa-0.29□□□□□ -2.46
SNORD54-201ENST00000459159 LCE1BQ5T7P3 118 aa-0.29□□□□□ -2.46
SNORD54-201ENST00000459159 HNRNPABQ99729 332 aaKnown RBP-0.29□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms