RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 IQSEC2Q5JU85 1478 aa10.27□□□□□ -0.77
SBDSP1-204ENST00000453858 BCORL1Q5H9F3 1711 aa10.26□□□□□ -0.77
SBDSP1-204ENST00000453858 MAGI3Q5TCQ9 1506 aa10.26□□□□□ -0.77
SBDSP1-204ENST00000453858 MED1Q15648 1581 aaPredicted RBP10.26□□□□□ -0.77
SBDSP1-204ENST00000453858 UHRF1BP1LA0JNW5 1464 aa10.25□□□□□ -0.77
SBDSP1-204ENST00000453858 STRCQ7RTU9 1775 aa10.25□□□□□ -0.77
SBDSP1-204ENST00000453858 SPDYE1Q8NFV5 336 aaPredicted RBP10.24□□□□□ -0.77
SBDSP1-204ENST00000453858 ERICH3Q5RHP9 1530 aa10.23□□□□□ -0.77
SBDSP1-204ENST00000453858 ARAP3Q8WWN8 1544 aa10.23□□□□□ -0.77
SBDSP1-204ENST00000453858 SP7Q8TDD2 431 aaPredicted RBP10.22□□□□□ -0.77
SBDSP1-204ENST00000453858 KDM5BQ9UGL1 1544 aa10.22□□□□□ -0.77
SBDSP1-204ENST00000453858 CD109Q6YHK3 1445 aa10.21□□□□□ -0.78
SBDSP1-204ENST00000453858 CUL7Q14999 1698 aa10.2□□□□□ -0.78
SBDSP1-204ENST00000453858 PTPRTO14522 1441 aa10.19□□□□□ -0.78
SBDSP1-204ENST00000453858 HSPA1LP34931 641 aa10.19□□□□□ -0.78
SBDSP1-204ENST00000453858 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
SBDSP1-204ENST00000453858 RGS17Q9UGC6 210 aaPredicted RBP10.18□□□□□ -0.78
SBDSP1-204ENST00000453858 UACAQ9BZF9 1416 aa10.17□□□□□ -0.78
SBDSP1-204ENST00000453858 TNIKQ9UKE5 1360 aa10.17□□□□□ -0.78
SBDSP1-204ENST00000453858 RIMS1Q86UR5 1692 aaKnown RBP10.16□□□□□ -0.78
SBDSP1-204ENST00000453858 TTBK1Q5TCY1 1321 aaPredicted RBP10.16□□□□□ -0.78
SBDSP1-204ENST00000453858 ARID4BQ4LE39 1312 aaPredicted RBP10.15□□□□□ -0.78
SBDSP1-204ENST00000453858 RAPGEF3O95398 923 aa10.15□□□□□ -0.78
SBDSP1-204ENST00000453858 WRNQ14191 1432 aaPredicted RBP eCLIP10.15□□□□□ -0.79
SBDSP1-204ENST00000453858 HAX1O00165 279 aa10.14□□□□□ -0.79
SBDSP1-204ENST00000453858 WDR7Q9Y4E6 1490 aa10.13□□□□□ -0.79
SBDSP1-204ENST00000453858 CLEC11AQ9Y240 323 aa10.13□□□□□ -0.79
SBDSP1-204ENST00000453858 STAG3Q9UJ98 1225 aa10.12□□□□□ -0.79
SBDSP1-204ENST00000453858 ZCCHC11Q5TAX3 1644 aaKnown RBP10.1□□□□□ -0.79
SBDSP1-204ENST00000453858 PRKAR2AP13861 404 aaKnown RBP10.09□□□□□ -0.79
SBDSP1-204ENST00000453858 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
SBDSP1-204ENST00000453858 CFAP43Q8NDM7 1665 aa10.09□□□□□ -0.79
SBDSP1-204ENST00000453858 KCNH8Q96L42 1107 aa10.08□□□□□ -0.8
SBDSP1-204ENST00000453858 CARMIL2Q6F5E8 1435 aa10.06□□□□□ -0.8
SBDSP1-204ENST00000453858 CEBPAP49715 358 aaPredicted RBP10.05□□□□□ -0.8
SBDSP1-204ENST00000453858 PREX1Q8TCU6 1659 aa10.05□□□□□ -0.8
SBDSP1-204ENST00000453858 VASPP50552 380 aaPredicted RBP10.03□□□□□ -0.8
SBDSP1-204ENST00000453858 AMER1Q5JTC6 1135 aaPredicted RBP10.03□□□□□ -0.8
SBDSP1-204ENST00000453858 FRMPD1Q5SYB0 1578 aa10.03□□□□□ -0.8
SBDSP1-204ENST00000453858 TTC37Q6PGP7 1564 aa10.03□□□□□ -0.8
SBDSP1-204ENST00000453858 ZNF335Q9H4Z2 1342 aaPredicted RBP10.03□□□□□ -0.8
SBDSP1-204ENST00000453858 PRR29P0C7W0 189 aa10.02□□□□□ -0.81
SBDSP1-204ENST00000453858 POTEAQ6S8J7 498 aa10.02□□□□□ -0.81
SBDSP1-204ENST00000453858 SETD1BQ9UPS6 1966 aaKnown RBP10.02□□□□□ -0.81
SBDSP1-204ENST00000453858 SIGLEC1Q9BZZ2 1709 aa10.02□□□□□ -0.81
SBDSP1-204ENST00000453858 DISP1Q96F81 1524 aa10.01□□□□□ -0.81
SBDSP1-204ENST00000453858 C19orf67A6NJJ6 358 aa10□□□□□ -0.81
SBDSP1-204ENST00000453858 EVX2Q03828 476 aa10□□□□□ -0.81
SBDSP1-204ENST00000453858 POGZQ7Z3K3 1410 aa9.99□□□□□ -0.81
SBDSP1-204ENST00000453858 IGF1RP08069 1367 aa9.99□□□□□ -0.81
SBDSP1-204ENST00000453858 NCOA1Q15788 1441 aa9.99□□□□□ -0.81
SBDSP1-204ENST00000453858 UHRF1BP1Q6BDS2 1440 aa9.99□□□□□ -0.81
SBDSP1-204ENST00000453858 PIP4K2BP78356 416 aa9.98□□□□□ -0.81
SBDSP1-204ENST00000453858 ARHGEF40Q8TER5 1519 aa9.97□□□□□ -0.81
SBDSP1-204ENST00000453858 MLECQ14165 292 aa9.97□□□□□ -0.81
SBDSP1-204ENST00000453858 UPF1Q92900 1129 aaKnown RBP eCLIP9.96□□□□□ -0.82
SBDSP1-204ENST00000453858 NEO1Q92859 1461 aa9.96□□□□□ -0.82
SBDSP1-204ENST00000453858 FANCAO15360 1455 aa9.95□□□□□ -0.82
SBDSP1-204ENST00000453858 ARHGEF12Q9NZN5 1544 aa9.95□□□□□ -0.82
SBDSP1-204ENST00000453858 TOM1O60784 492 aa9.94□□□□□ -0.82
SBDSP1-204ENST00000453858 PLEKHG5O94827 1062 aa9.93□□□□□ -0.82
SBDSP1-204ENST00000453858 CHADLQ6NUI6 762 aa9.93□□□□□ -0.82
SBDSP1-204ENST00000453858 FER1L4A9Z1Z3 1794 aa9.93□□□□□ -0.82
SBDSP1-204ENST00000453858 FHOD3Q2V2M9 1422 aa9.92□□□□□ -0.82
SBDSP1-204ENST00000453858 AKNAQ7Z591 1439 aa9.92□□□□□ -0.82
SBDSP1-204ENST00000453858 ALKQ9UM73 1620 aa9.92□□□□□ -0.82
SBDSP1-204ENST00000453858 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
SBDSP1-204ENST00000453858 NCKAP5LQ9HCH0 1330 aa9.9□□□□□ -0.82
SBDSP1-204ENST00000453858 MIER1Q8N108 512 aa9.89□□□□□ -0.83
SBDSP1-204ENST00000453858 PLCD3Q8N3E9 789 aa9.89□□□□□ -0.83
SBDSP1-204ENST00000453858 ZBTB47Q9UFB7 747 aaPredicted RBP9.88□□□□□ -0.83
SBDSP1-204ENST00000453858 ABCA9Q8IUA7 1624 aa9.88□□□□□ -0.83
SBDSP1-204ENST00000453858 IFFO2Q5TF58 517 aa9.87□□□□□ -0.83
SBDSP1-204ENST00000453858 IFNLR1Q8IU57 520 aaPredicted RBP9.87□□□□□ -0.83
SBDSP1-204ENST00000453858 RICTORQ6R327 1708 aa9.87□□□□□ -0.83
SBDSP1-204ENST00000453858 DENND4BO75064 1496 aaPredicted RBP9.86□□□□□ -0.83
SBDSP1-204ENST00000453858 IQGAP2Q13576 1575 aa9.86□□□□□ -0.83
SBDSP1-204ENST00000453858 RTN4Q9NQC3 1192 aaKnown RBP9.86□□□□□ -0.83
SBDSP1-204ENST00000453858 FARP1Q9Y4F1 1045 aaPredicted RBP9.86□□□□□ -0.83
SBDSP1-204ENST00000453858 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
SBDSP1-204ENST00000453858 UGGT2Q9NYU1 1516 aa9.85□□□□□ -0.83
SBDSP1-204ENST00000453858 MAGI2Q86UL8 1455 aa9.85□□□□□ -0.83
SBDSP1-204ENST00000453858 SETD1AO15047 1707 aaKnown RBP9.85□□□□□ -0.83
SBDSP1-204ENST00000453858 ZMYM4Q5VZL5 1548 aa9.84□□□□□ -0.83
SBDSP1-204ENST00000453858 KLHL34Q8N239 644 aa9.84□□□□□ -0.83
SBDSP1-204ENST00000453858 ABCA8O94911 1581 aa9.84□□□□□ -0.83
SBDSP1-204ENST00000453858 CAMSAP1Q5T5Y3 1602 aa9.83□□□□□ -0.84
SBDSP1-204ENST00000453858 ZFYVE16Q7Z3T8 1539 aa9.82□□□□□ -0.84
SBDSP1-204ENST00000453858 GABBR2O75899 941 aa9.82□□□□□ -0.84
SBDSP1-204ENST00000453858 PKD2Q13563 968 aa9.82□□□□□ -0.84
SBDSP1-204ENST00000453858 CARMIL1Q5VZK9 1371 aa9.81□□□□□ -0.84
SBDSP1-204ENST00000453858 CLCN6P51797 869 aa9.81□□□□□ -0.84
SBDSP1-204ENST00000453858 ATP10AO60312 1499 aa9.8□□□□□ -0.84
SBDSP1-204ENST00000453858 ATP10BO94823 1461 aa9.8□□□□□ -0.84
SBDSP1-204ENST00000453858 SPOCK2Q92563 424 aa9.8□□□□□ -0.84
SBDSP1-204ENST00000453858 PTPRKQ15262 1439 aa9.8□□□□□ -0.84
SBDSP1-204ENST00000453858 TCOF1Q13428 1488 aaKnown RBP9.79□□□□□ -0.84
SBDSP1-204ENST00000453858 KIAA0556O60303 1618 aa9.79□□□□□ -0.84
SBDSP1-204ENST00000453858 CEP350Q5VT06 3117 aa9.79□□□□□ -0.84
SBDSP1-204ENST00000453858 EFCAB5A4FU69 1503 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms