RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 TRHP20396 242 aaPredicted RBP11.78□□□□□ -0.52
AC004540.1-206ENST00000448056 TROQ12816 1431 aaPredicted RBP11.77□□□□□ -0.52
AC004540.1-206ENST00000448056 ABCC10Q5T3U5 1492 aa11.77□□□□□ -0.52
AC004540.1-206ENST00000448056 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
AC004540.1-206ENST00000448056 MAGI3Q5TCQ9 1506 aa11.76□□□□□ -0.53
AC004540.1-206ENST00000448056 TIAM1Q13009 1591 aa11.75□□□□□ -0.53
AC004540.1-206ENST00000448056 LRRC9Q6ZRR7 1453 aa11.75□□□□□ -0.53
AC004540.1-206ENST00000448056 PPARGC1BQ86YN6 1023 aaKnown RBP11.73□□□□□ -0.53
AC004540.1-206ENST00000448056 GLI2P10070 1586 aa11.71□□□□□ -0.53
AC004540.1-206ENST00000448056 CFAP43Q8NDM7 1665 aa11.71□□□□□ -0.54
AC004540.1-206ENST00000448056 DIP2BQ9P265 1576 aa11.71□□□□□ -0.54
AC004540.1-206ENST00000448056 CD109Q6YHK3 1445 aa11.7□□□□□ -0.54
AC004540.1-206ENST00000448056 SPINK5Q9NQ38 1064 aaPredicted RBP11.7□□□□□ -0.54
AC004540.1-206ENST00000448056 EHBP1L1Q8N3D4 1523 aa11.7□□□□□ -0.54
AC004540.1-206ENST00000448056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
AC004540.1-206ENST00000448056 KIF14Q15058 1648 aa11.68□□□□□ -0.54
AC004540.1-206ENST00000448056 CCNB3Q8WWL7 1395 aa11.67□□□□□ -0.54
AC004540.1-206ENST00000448056 NCOA2Q15596 1464 aa11.67□□□□□ -0.54
AC004540.1-206ENST00000448056 PLCH2O75038 1416 aa11.67□□□□□ -0.54
AC004540.1-206ENST00000448056 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
AC004540.1-206ENST00000448056 GPATCH8Q9UKJ3 1502 aaKnown RBP11.65□□□□□ -0.54
AC004540.1-206ENST00000448056 KIF13AQ9H1H9 1805 aa11.65□□□□□ -0.54
AC004540.1-206ENST00000448056 EFCAB2Q5VUJ9 269 aa11.65□□□□□ -0.54
AC004540.1-206ENST00000448056 CFDP1Q9UEE9 299 aaPredicted RBP11.65□□□□□ -0.54
AC004540.1-206ENST00000448056 MAP3K4Q9Y6R4 1608 aa11.64□□□□□ -0.55
AC004540.1-206ENST00000448056 TTC37Q6PGP7 1564 aa11.64□□□□□ -0.55
AC004540.1-206ENST00000448056 SUPT6HQ7KZ85 1726 aaKnown RBP11.63□□□□□ -0.55
AC004540.1-206ENST00000448056 PHLDB1Q86UU1 1377 aa11.63□□□□□ -0.55
AC004540.1-206ENST00000448056 ZNF777Q9ULD5 760 aaPredicted RBP11.62□□□□□ -0.55
AC004540.1-206ENST00000448056 CAPN15O75808 1086 aa11.61□□□□□ -0.55
AC004540.1-206ENST00000448056 ZNF219Q9P2Y4 722 aaPredicted RBP11.61□□□□□ -0.55
AC004540.1-206ENST00000448056 TEX14Q8IWB6 1497 aa11.61□□□□□ -0.55
AC004540.1-206ENST00000448056 FANCAO15360 1455 aa11.6□□□□□ -0.55
AC004540.1-206ENST00000448056 ARAP3Q8WWN8 1544 aa11.6□□□□□ -0.55
AC004540.1-206ENST00000448056 MYOM3Q5VTT5 1437 aa11.6□□□□□ -0.55
AC004540.1-206ENST00000448056 ZNF644Q9H582 1327 aaPredicted RBP11.6□□□□□ -0.55
AC004540.1-206ENST00000448056 ARHGAP5Q13017 1502 aa11.59□□□□□ -0.55
AC004540.1-206ENST00000448056 AKNAQ7Z591 1439 aa11.59□□□□□ -0.55
AC004540.1-206ENST00000448056 MIA2Q96PC5 1412 aa11.59□□□□□ -0.55
AC004540.1-206ENST00000448056 NEO1Q92859 1461 aa11.58□□□□□ -0.56
AC004540.1-206ENST00000448056 TSPOAP1O95153 1857 aa11.58□□□□□ -0.56
AC004540.1-206ENST00000448056 PPRC1Q5VV67 1664 aaKnown RBP11.58□□□□□ -0.56
AC004540.1-206ENST00000448056 CDC42BPAQ5VT25 1732 aa11.57□□□□□ -0.56
AC004540.1-206ENST00000448056 MYO5CQ9NQX4 1742 aa11.57□□□□□ -0.56
AC004540.1-206ENST00000448056 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.56
AC004540.1-206ENST00000448056 CDC42BPBQ9Y5S2 1711 aa11.57□□□□□ -0.56
AC004540.1-206ENST00000448056 PREX2Q70Z35 1606 aa11.57□□□□□ -0.56
AC004540.1-206ENST00000448056 FGD6Q6ZV73 1430 aa11.56□□□□□ -0.56
AC004540.1-206ENST00000448056 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
AC004540.1-206ENST00000448056 RAPGEF3O95398 923 aa11.55□□□□□ -0.56
AC004540.1-206ENST00000448056 CACNB1Q02641 598 aaPredicted RBP11.55□□□□□ -0.56
AC004540.1-206ENST00000448056 KIAA1107Q9UPP5 1409 aa11.54□□□□□ -0.56
AC004540.1-206ENST00000448056 FAM50AQ14320 339 aaKnown RBP11.54□□□□□ -0.56
AC004540.1-206ENST00000448056 RSPH4AQ5TD94 716 aa11.54□□□□□ -0.56
AC004540.1-206ENST00000448056 AFAP1Q8N556 730 aa11.54□□□□□ -0.56
AC004540.1-206ENST00000448056 COL17A1Q9UMD9 1497 aaPredicted RBP11.54□□□□□ -0.56
AC004540.1-206ENST00000448056 ITSN2Q9NZM3 1697 aa11.53□□□□□ -0.56
AC004540.1-206ENST00000448056 ADGRL1O94910 1474 aa11.53□□□□□ -0.56
AC004540.1-206ENST00000448056 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
AC004540.1-206ENST00000448056 ARHGEF12Q9NZN5 1544 aa11.52□□□□□ -0.57
AC004540.1-206ENST00000448056 SAMD9LQ8IVG5 1584 aa11.52□□□□□ -0.57
AC004540.1-206ENST00000448056 CFAP74Q9C0B2 1584 aa11.52□□□□□ -0.57
AC004540.1-206ENST00000448056 DENND4BO75064 1496 aaPredicted RBP11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 CAMSAP2Q08AD1 1489 aa11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 TCOF1Q13428 1488 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 RRBP1Q9P2E9 1410 aaKnown RBP11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 TRAPPC8Q9Y2L5 1435 aa11.51□□□□□ -0.57
AC004540.1-206ENST00000448056 PTPN23Q9H3S7 1636 aa11.5□□□□□ -0.57
AC004540.1-206ENST00000448056 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.5□□□□□ -0.57
AC004540.1-206ENST00000448056 ABCC1P33527 1531 aa11.5□□□□□ -0.57
AC004540.1-206ENST00000448056 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
AC004540.1-206ENST00000448056 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
AC004540.1-206ENST00000448056 POGZQ7Z3K3 1410 aa11.48□□□□□ -0.57
AC004540.1-206ENST00000448056 SYCP2Q9BX26 1530 aa11.48□□□□□ -0.57
AC004540.1-206ENST00000448056 ZNF518AQ6AHZ1 1483 aa11.47□□□□□ -0.57
AC004540.1-206ENST00000448056 ABCC5O15440 1437 aa11.47□□□□□ -0.57
AC004540.1-206ENST00000448056 SPAG9O60271 1321 aaKnown RBP11.47□□□□□ -0.57
AC004540.1-206ENST00000448056 POLA2Q14181 598 aa11.47□□□□□ -0.57
AC004540.1-206ENST00000448056 KDM6BO15054 1643 aa11.46□□□□□ -0.57
AC004540.1-206ENST00000448056 ITGAEP38570 1179 aa11.46□□□□□ -0.57
AC004540.1-206ENST00000448056 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.57
AC004540.1-206ENST00000448056 CCDC141Q6ZP82 1450 aa11.45□□□□□ -0.58
AC004540.1-206ENST00000448056 DSG3P32926 999 aa11.45□□□□□ -0.58
AC004540.1-206ENST00000448056 ARHGEF5Q12774 1597 aa11.45□□□□□ -0.58
AC004540.1-206ENST00000448056 DAPK1P53355 1430 aa11.44□□□□□ -0.58
AC004540.1-206ENST00000448056 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
AC004540.1-206ENST00000448056 FRMPD1Q5SYB0 1578 aa11.43□□□□□ -0.58
AC004540.1-206ENST00000448056 MLH3Q9UHC1 1453 aa11.43□□□□□ -0.58
AC004540.1-206ENST00000448056 RICTORQ6R327 1708 aa11.43□□□□□ -0.58
AC004540.1-206ENST00000448056 RTEL1-TNFRSF6BF6WH68 1400 aa11.43□□□□□ -0.58
AC004540.1-206ENST00000448056 PTPRKQ15262 1439 aa11.43□□□□□ -0.58
AC004540.1-206ENST00000448056 KDM5CP41229 1560 aa11.42□□□□□ -0.58
AC004540.1-206ENST00000448056 MAGI2Q86UL8 1455 aa11.42□□□□□ -0.58
AC004540.1-206ENST00000448056 TRIM26Q12899 539 aaPredicted RBP11.41□□□□□ -0.58
AC004540.1-206ENST00000448056 RRP7BPQ9NSQ0 103 aa11.41□□□□□ -0.58
AC004540.1-206ENST00000448056 DNMT1P26358 1616 aaKnown RBP11.41□□□□□ -0.58
AC004540.1-206ENST00000448056 C9orf84Q5VXU9 1444 aa11.41□□□□□ -0.58
AC004540.1-206ENST00000448056 ZMYM4Q5VZL5 1548 aa11.4□□□□□ -0.58
AC004540.1-206ENST00000448056 YEATS2Q9ULM3 1422 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms