RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MAGI3Q5TCQ9 1506 aa7.2□□□□□ -1.26
EDEM3-203ENST00000439962 TEX14Q8IWB6 1497 aa7.2□□□□□ -1.26
EDEM3-203ENST00000439962 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
EDEM3-203ENST00000439962 SENP3Q9H4L4 574 aaPredicted RBP7.2□□□□□ -1.26
EDEM3-203ENST00000439962 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
EDEM3-203ENST00000439962 AKNAQ7Z591 1439 aa7.2□□□□□ -1.26
EDEM3-203ENST00000439962 GGT6Q6P531 493 aa7.19□□□□□ -1.26
EDEM3-203ENST00000439962 LRRIQ1Q96JM4 1722 aa7.19□□□□□ -1.26
EDEM3-203ENST00000439962 ADGRL1O94910 1474 aa7.19□□□□□ -1.26
EDEM3-203ENST00000439962 PPRC1Q5VV67 1664 aaKnown RBP7.19□□□□□ -1.26
EDEM3-203ENST00000439962 VPS8Q8N3P4 1428 aa7.18□□□□□ -1.26
EDEM3-203ENST00000439962 MAP3K4Q9Y6R4 1608 aa7.18□□□□□ -1.26
EDEM3-203ENST00000439962 YEATS2Q9ULM3 1422 aa7.18□□□□□ -1.26
EDEM3-203ENST00000439962 ESF1Q9H501 851 aaKnown RBP7.17□□□□□ -1.26
EDEM3-203ENST00000439962 FYCO1Q9BQS8 1478 aa7.16□□□□□ -1.26
EDEM3-203ENST00000439962 DENND4BO75064 1496 aaPredicted RBP7.16□□□□□ -1.26
EDEM3-203ENST00000439962 CCDC18Q5T9S5 1454 aa7.16□□□□□ -1.26
EDEM3-203ENST00000439962 GLI2P10070 1586 aa7.16□□□□□ -1.26
EDEM3-203ENST00000439962 PLCH2O75038 1416 aa7.16□□□□□ -1.26
EDEM3-203ENST00000439962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.16□□□□□ -1.26
EDEM3-203ENST00000439962 TRAPPC8Q9Y2L5 1435 aa7.15□□□□□ -1.26
EDEM3-203ENST00000439962 HSPA2P54652 639 aa7.15□□□□□ -1.26
EDEM3-203ENST00000439962 SPAG9O60271 1321 aaKnown RBP7.15□□□□□ -1.27
EDEM3-203ENST00000439962 RRP7BPQ9NSQ0 103 aa7.14□□□□□ -1.27
EDEM3-203ENST00000439962 CFAP43Q8NDM7 1665 aa7.14□□□□□ -1.27
EDEM3-203ENST00000439962 MAP3K1Q13233 1512 aa7.14□□□□□ -1.27
EDEM3-203ENST00000439962 ABCA9Q8IUA7 1624 aa7.14□□□□□ -1.27
EDEM3-203ENST00000439962 TSPY4P0CV99 314 aa7.13□□□□□ -1.27
EDEM3-203ENST00000439962 TSPY10P0CW01 314 aa7.13□□□□□ -1.27
EDEM3-203ENST00000439962 NCOA2Q15596 1464 aa7.13□□□□□ -1.27
EDEM3-203ENST00000439962 GPATCH8Q9UKJ3 1502 aaKnown RBP7.12□□□□□ -1.27
EDEM3-203ENST00000439962 KIF3BO15066 747 aa7.12□□□□□ -1.27
EDEM3-203ENST00000439962 ARHGEF12Q9NZN5 1544 aa7.12□□□□□ -1.27
EDEM3-203ENST00000439962 SYCP2Q9BX26 1530 aa7.12□□□□□ -1.27
EDEM3-203ENST00000439962 PHLDB1Q86UU1 1377 aa7.11□□□□□ -1.27
EDEM3-203ENST00000439962 LRRC9Q6ZRR7 1453 aa7.1□□□□□ -1.27
EDEM3-203ENST00000439962 NEO1Q92859 1461 aa7.1□□□□□ -1.27
EDEM3-203ENST00000439962 MYO5CQ9NQX4 1742 aa7.1□□□□□ -1.27
EDEM3-203ENST00000439962 POGZQ7Z3K3 1410 aa7.09□□□□□ -1.27
EDEM3-203ENST00000439962 TIAM1Q13009 1591 aa7.09□□□□□ -1.27
EDEM3-203ENST00000439962 CDC42BPBQ9Y5S2 1711 aa7.09□□□□□ -1.27
EDEM3-203ENST00000439962 ARAP3Q8WWN8 1544 aa7.09□□□□□ -1.28
EDEM3-203ENST00000439962 CDC42BPAQ5VT25 1732 aa7.08□□□□□ -1.28
EDEM3-203ENST00000439962 ZNF518AQ6AHZ1 1483 aa7.08□□□□□ -1.28
EDEM3-203ENST00000439962 CLSPNQ9HAW4 1339 aa7.07□□□□□ -1.28
EDEM3-203ENST00000439962 FRMPD1Q5SYB0 1578 aa7.07□□□□□ -1.28
EDEM3-203ENST00000439962 ZFYVE16Q7Z3T8 1539 aa7.07□□□□□ -1.28
EDEM3-203ENST00000439962 EHBP1L1Q8N3D4 1523 aa7.07□□□□□ -1.28
EDEM3-203ENST00000439962 SAMD9LQ8IVG5 1584 aa7.07□□□□□ -1.28
EDEM3-203ENST00000439962 FBXO31Q5XUX0 539 aaPredicted RBP7.06□□□□□ -1.28
EDEM3-203ENST00000439962 WASHC2CQ9Y4E1 1318 aa7.06□□□□□ -1.28
EDEM3-203ENST00000439962 CAMSAP2Q08AD1 1489 aa7.06□□□□□ -1.28
EDEM3-203ENST00000439962 SUPT6HQ7KZ85 1726 aaKnown RBP7.05□□□□□ -1.28
EDEM3-203ENST00000439962 PREX2Q70Z35 1606 aa7.05□□□□□ -1.28
EDEM3-203ENST00000439962 RICTORQ6R327 1708 aa7.04□□□□□ -1.28
EDEM3-203ENST00000439962 MYOM3Q5VTT5 1437 aa7.04□□□□□ -1.28
EDEM3-203ENST00000439962 ATP10AO60312 1499 aa7.04□□□□□ -1.28
EDEM3-203ENST00000439962 RRBP1Q9P2E9 1410 aaKnown RBP7.04□□□□□ -1.28
EDEM3-203ENST00000439962 SIGLEC1Q9BZZ2 1709 aa7.04□□□□□ -1.28
EDEM3-203ENST00000439962 ABCC1P33527 1531 aa7.04□□□□□ -1.28
EDEM3-203ENST00000439962 CFAP65Q6ZU64 1925 aaKnown RBP7.03□□□□□ -1.28
EDEM3-203ENST00000439962 CHGAP10645 457 aaKnown RBP7.03□□□□□ -1.28
EDEM3-203ENST00000439962 MADDQ8WXG6 1647 aa7.03□□□□□ -1.28
EDEM3-203ENST00000439962 PTPRMP28827 1452 aa7.03□□□□□ -1.28
EDEM3-203ENST00000439962 C9orf84Q5VXU9 1444 aa7.02□□□□□ -1.29
EDEM3-203ENST00000439962 NUTM2DQ5VT03 806 aaPredicted RBP7.02□□□□□ -1.29
EDEM3-203ENST00000439962 TRIM52Q96A61 297 aa7.02□□□□□ -1.29
EDEM3-203ENST00000439962 RIMS1Q86UR5 1692 aaKnown RBP7.02□□□□□ -1.29
EDEM3-203ENST00000439962 FGD6Q6ZV73 1430 aa7.02□□□□□ -1.29
EDEM3-203ENST00000439962 CFAP74Q9C0B2 1584 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 MBD5Q9P267 1494 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 ABCA6Q8N139 1617 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 HECW2Q9P2P5 1572 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 ARHGEF40Q8TER5 1519 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 KIF15Q9NS87 1388 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 CCER1Q8TC90 406 aaPredicted RBP7.01□□□□□ -1.29
EDEM3-203ENST00000439962 BCANQ96GW7 911 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 STAG3Q9UJ98 1225 aa7.01□□□□□ -1.29
EDEM3-203ENST00000439962 ATP7AQ04656 1500 aa7□□□□□ -1.29
EDEM3-203ENST00000439962 A2MP01023 1474 aa7□□□□□ -1.29
EDEM3-203ENST00000439962 CCDC141Q6ZP82 1450 aa7□□□□□ -1.29
EDEM3-203ENST00000439962 KIDINS220Q9ULH0 1771 aa7□□□□□ -1.29
EDEM3-203ENST00000439962 ZMYM3Q14202 1370 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 FOXD1Q16676 465 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 DIP2CQ9Y2E4 1556 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 PLEKHH2Q8IVE3 1493 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 ITSN2Q9NZM3 1697 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 ABCC5O15440 1437 aa6.99□□□□□ -1.29
EDEM3-203ENST00000439962 KIAA1107Q9UPP5 1409 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.98□□□□□ -1.29
EDEM3-203ENST00000439962 NCKAP5LQ9HCH0 1330 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 MLH3Q9UHC1 1453 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 MAGI2Q86UL8 1455 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 PTPN23Q9H3S7 1636 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 RSPH4AQ5TD94 716 aa6.98□□□□□ -1.29
EDEM3-203ENST00000439962 RBM33Q96EV2 1170 aaKnown RBP6.98□□□□□ -1.29
EDEM3-203ENST00000439962 DHX29Q7Z478 1369 aaKnown RBP6.97□□□□□ -1.29
EDEM3-203ENST00000439962 DAPK1P53355 1430 aa6.97□□□□□ -1.29
EDEM3-203ENST00000439962 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
EDEM3-203ENST00000439962 BCORL1Q5H9F3 1711 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms