RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 GPATCH8Q9UKJ3 1502 aaKnown RBP16.52■□□□□ 0.24
UBE2F-213ENST00000439780 LRRC9Q6ZRR7 1453 aa16.52■□□□□ 0.23
UBE2F-213ENST00000439780 CDC42BPAQ5VT25 1732 aa16.51■□□□□ 0.23
UBE2F-213ENST00000439780 PREX2Q70Z35 1606 aa16.51■□□□□ 0.23
UBE2F-213ENST00000439780 CFAP74Q9C0B2 1584 aa16.51■□□□□ 0.23
UBE2F-213ENST00000439780 FRMPD1Q5SYB0 1578 aa16.5■□□□□ 0.23
UBE2F-213ENST00000439780 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
UBE2F-213ENST00000439780 SCAPERQ9BY12 1400 aa16.49■□□□□ 0.23
UBE2F-213ENST00000439780 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
UBE2F-213ENST00000439780 DENND4BO75064 1496 aaPredicted RBP16.48■□□□□ 0.23
UBE2F-213ENST00000439780 NCOA2Q15596 1464 aa16.48■□□□□ 0.23
UBE2F-213ENST00000439780 RICTORQ6R327 1708 aa16.46■□□□□ 0.23
UBE2F-213ENST00000439780 APLP2Q06481 763 aa16.46■□□□□ 0.23
UBE2F-213ENST00000439780 ARHGEF12Q9NZN5 1544 aa16.45■□□□□ 0.22
UBE2F-213ENST00000439780 SUPT6HQ7KZ85 1726 aaKnown RBP16.45■□□□□ 0.22
UBE2F-213ENST00000439780 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
UBE2F-213ENST00000439780 ZNF777Q9ULD5 760 aaPredicted RBP16.45■□□□□ 0.22
UBE2F-213ENST00000439780 POGZQ7Z3K3 1410 aa16.44■□□□□ 0.22
UBE2F-213ENST00000439780 AFAP1Q8N556 730 aa16.43■□□□□ 0.22
UBE2F-213ENST00000439780 ZNF644Q9H582 1327 aaPredicted RBP16.43■□□□□ 0.22
UBE2F-213ENST00000439780 SAMD9LQ8IVG5 1584 aa16.43■□□□□ 0.22
UBE2F-213ENST00000439780 ABCC1P33527 1531 aa16.42■□□□□ 0.22
UBE2F-213ENST00000439780 TRAPPC8Q9Y2L5 1435 aa16.41■□□□□ 0.22
UBE2F-213ENST00000439780 HNRNPMP52272 730 aaKnown RBP eCLIP16.4■□□□□ 0.222e-6■■■□□ 16.1
UBE2F-213ENST00000439780 ZMYM4Q5VZL5 1548 aa16.4■□□□□ 0.22
UBE2F-213ENST00000439780 YEATS2Q9ULM3 1422 aa16.38■□□□□ 0.21
UBE2F-213ENST00000439780 ITSN2Q9NZM3 1697 aa16.38■□□□□ 0.21
UBE2F-213ENST00000439780 ZNF518AQ6AHZ1 1483 aa16.37■□□□□ 0.21
UBE2F-213ENST00000439780 SYCP2Q9BX26 1530 aa16.37■□□□□ 0.21
UBE2F-213ENST00000439780 KIAA1107Q9UPP5 1409 aa16.36■□□□□ 0.21
UBE2F-213ENST00000439780 KDM5CP41229 1560 aa16.36■□□□□ 0.21
UBE2F-213ENST00000439780 MAGI2Q86UL8 1455 aa16.35■□□□□ 0.21
UBE2F-213ENST00000439780 KDM4FA0A1W2PPD8 638 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 MYOM3Q5VTT5 1437 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 PLEKHH2Q8IVE3 1493 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 MBD5Q9P267 1494 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 ZFYVE16Q7Z3T8 1539 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
UBE2F-213ENST00000439780 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
UBE2F-213ENST00000439780 CAMSAP2Q08AD1 1489 aa16.33■□□□□ 0.2
UBE2F-213ENST00000439780 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
UBE2F-213ENST00000439780 MIA2Q96PC5 1412 aa16.3■□□□□ 0.2
UBE2F-213ENST00000439780 SIGLEC1Q9BZZ2 1709 aa16.3■□□□□ 0.2
UBE2F-213ENST00000439780 HECW2Q9P2P5 1572 aa16.3■□□□□ 0.2
UBE2F-213ENST00000439780 MYT1LQ9UL68 1186 aa16.29■□□□□ 0.2
UBE2F-213ENST00000439780 ATP10AO60312 1499 aa16.29■□□□□ 0.2
UBE2F-213ENST00000439780 KIDINS220Q9ULH0 1771 aa16.28■□□□□ 0.2
UBE2F-213ENST00000439780 SPAG9O60271 1321 aaKnown RBP16.28■□□□□ 0.2
UBE2F-213ENST00000439780 DIP2CQ9Y2E4 1556 aa16.27■□□□□ 0.2
UBE2F-213ENST00000439780 ABCA6Q8N139 1617 aa16.27■□□□□ 0.19
UBE2F-213ENST00000439780 FGD6Q6ZV73 1430 aa16.26■□□□□ 0.19
UBE2F-213ENST00000439780 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
UBE2F-213ENST00000439780 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
UBE2F-213ENST00000439780 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
UBE2F-213ENST00000439780 ARHGEF5Q12774 1597 aa16.24■□□□□ 0.19
UBE2F-213ENST00000439780 INO80Q9ULG1 1556 aaPredicted RBP16.24■□□□□ 0.19
UBE2F-213ENST00000439780 ATP7AQ04656 1500 aa16.24■□□□□ 0.19
UBE2F-213ENST00000439780 PTPN23Q9H3S7 1636 aa16.23■□□□□ 0.19
UBE2F-213ENST00000439780 RSPH4AQ5TD94 716 aa16.23■□□□□ 0.19
UBE2F-213ENST00000439780 TCOF1Q13428 1488 aaKnown RBP16.22■□□□□ 0.19
UBE2F-213ENST00000439780 RTEL1-TNFRSF6BF6WH68 1400 aa16.2■□□□□ 0.18
UBE2F-213ENST00000439780 BCORL1Q5H9F3 1711 aa16.2■□□□□ 0.18
UBE2F-213ENST00000439780 REREQ9P2R6 1566 aa16.2■□□□□ 0.18
UBE2F-213ENST00000439780 ADAMTSL3P82987 1691 aa16.2■□□□□ 0.18
UBE2F-213ENST00000439780 MLECQ14165 292 aa16.19■□□□□ 0.18
UBE2F-213ENST00000439780 ABCC5O15440 1437 aa16.19■□□□□ 0.18
UBE2F-213ENST00000439780 TSPY4P0CV99 314 aa16.18■□□□□ 0.18
UBE2F-213ENST00000439780 TSPY10P0CW01 314 aa16.18■□□□□ 0.18
UBE2F-213ENST00000439780 AGLP35573 1532 aa16.16■□□□□ 0.18
UBE2F-213ENST00000439780 FAM50AQ14320 339 aaKnown RBP16.16■□□□□ 0.18
UBE2F-213ENST00000439780 A2MP01023 1474 aa16.16■□□□□ 0.18
UBE2F-213ENST00000439780 DAPK1P53355 1430 aa16.15■□□□□ 0.18
UBE2F-213ENST00000439780 MAST1Q9Y2H9 1570 aa16.15■□□□□ 0.18
UBE2F-213ENST00000439780 MADDQ8WXG6 1647 aa16.15■□□□□ 0.18
UBE2F-213ENST00000439780 PLXNC1O60486 1568 aa16.14■□□□□ 0.17
UBE2F-213ENST00000439780 DNMT1P26358 1616 aaKnown RBP16.14■□□□□ 0.17
UBE2F-213ENST00000439780 ADGBQ8N7X0 1667 aa16.13■□□□□ 0.17
UBE2F-213ENST00000439780 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
UBE2F-213ENST00000439780 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
UBE2F-213ENST00000439780 CHIC2Q9UKJ5 165 aa16.11■□□□□ 0.17
UBE2F-213ENST00000439780 PTPRMP28827 1452 aa16.1■□□□□ 0.17
UBE2F-213ENST00000439780 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
UBE2F-213ENST00000439780 PTPRKQ15262 1439 aa16.1■□□□□ 0.17
UBE2F-213ENST00000439780 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.17
UBE2F-213ENST00000439780 RRP7BPQ9NSQ0 103 aa16.08■□□□□ 0.16
UBE2F-213ENST00000439780 RRBP1Q9P2E9 1410 aaKnown RBP16.07■□□□□ 0.16
UBE2F-213ENST00000439780 FER1L4A9Z1Z3 1794 aa16.07■□□□□ 0.16
UBE2F-213ENST00000439780 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.06■□□□□ 0.16
UBE2F-213ENST00000439780 KIF3BO15066 747 aa16.06■□□□□ 0.16
UBE2F-213ENST00000439780 GGT6Q6P531 493 aa16.06■□□□□ 0.16
UBE2F-213ENST00000439780 NCOA1Q15788 1441 aa16.05■□□□□ 0.16
UBE2F-213ENST00000439780 KIF15Q9NS87 1388 aa16.05■□□□□ 0.16
UBE2F-213ENST00000439780 ITGAEP38570 1179 aa16.04■□□□□ 0.16
UBE2F-213ENST00000439780 CEBPAP49715 358 aaPredicted RBP16.04■□□□□ 0.16
UBE2F-213ENST00000439780 PLPPR3Q6T4P5 718 aa16.04■□□□□ 0.16
UBE2F-213ENST00000439780 ADGRL2O95490 1459 aa16.03■□□□□ 0.16
UBE2F-213ENST00000439780 ANKRD30AQ9BXX3 1397 aa16.03■□□□□ 0.16
UBE2F-213ENST00000439780 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
UBE2F-213ENST00000439780 ESF1Q9H501 851 aaKnown RBP15.99■□□□□ 0.15
UBE2F-213ENST00000439780 PPP6R1Q9UPN7 881 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms