RNA–Protein interactions for RNA: ENST00000438191.1

RPE-209, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 5

Gene RPE, Length 426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-209ENST00000438191 RGS17Q9UGC6 210 aaPredicted RBP16.68■□□□□ 0.26
RPE-209ENST00000438191 MAGI2Q86UL8 1455 aa16.67■□□□□ 0.26
RPE-209ENST00000438191 ATP10BO94823 1461 aa16.67■□□□□ 0.26
RPE-209ENST00000438191 HECW1Q76N89 1606 aa16.63■□□□□ 0.25
RPE-209ENST00000438191 C3P01024 1663 aa16.62■□□□□ 0.25
RPE-209ENST00000438191 ARID3CA6NKF2 412 aa16.62■□□□□ 0.25
RPE-209ENST00000438191 CAMSAP1Q5T5Y3 1602 aa16.61■□□□□ 0.25
RPE-209ENST00000438191 TOM1O60784 492 aa16.6■□□□□ 0.25
RPE-209ENST00000438191 CFAP74Q9C0B2 1584 aa16.59■□□□□ 0.25
RPE-209ENST00000438191 C9orf84Q5VXU9 1444 aa16.58■□□□□ 0.24
RPE-209ENST00000438191 ATP10AO60312 1499 aa16.58■□□□□ 0.24
RPE-209ENST00000438191 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
RPE-209ENST00000438191 TRAPPC8Q9Y2L5 1435 aa16.57■□□□□ 0.24
RPE-209ENST00000438191 NCKAP5LQ9HCH0 1330 aa16.57■□□□□ 0.24
RPE-209ENST00000438191 POTEAQ6S8J7 498 aa16.52■□□□□ 0.24
RPE-209ENST00000438191 SETD1AO15047 1707 aaKnown RBP16.52■□□□□ 0.24
RPE-209ENST00000438191 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
RPE-209ENST00000438191 RAPGEF2Q9Y4G8 1499 aa16.51■□□□□ 0.23
RPE-209ENST00000438191 CTTNBP2Q8WZ74 1663 aa16.49■□□□□ 0.23
RPE-209ENST00000438191 PKD2Q13563 968 aa16.47■□□□□ 0.23
RPE-209ENST00000438191 CPS1P31327 1500 aa16.46■□□□□ 0.23
RPE-209ENST00000438191 PLA2R1Q13018 1463 aa16.46■□□□□ 0.23
RPE-209ENST00000438191 TCOF1Q13428 1488 aaKnown RBP16.46■□□□□ 0.23
RPE-209ENST00000438191 PTPRKQ15262 1439 aa16.45■□□□□ 0.22
RPE-209ENST00000438191 PPP6R1Q9UPN7 881 aa16.44■□□□□ 0.22
RPE-209ENST00000438191 SCAPERQ9BY12 1400 aa16.44■□□□□ 0.22
RPE-209ENST00000438191 SENP3Q9H4L4 574 aaPredicted RBP16.43■□□□□ 0.22
RPE-209ENST00000438191 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPE-209ENST00000438191 SUPT6HQ7KZ85 1726 aaKnown RBP16.4■□□□□ 0.22
RPE-209ENST00000438191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
RPE-209ENST00000438191 HNRNPUL2Q1KMD3 747 aaKnown RBP16.4■□□□□ 0.22
RPE-209ENST00000438191 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
RPE-209ENST00000438191 NPATQ14207 1427 aa16.39■□□□□ 0.21
RPE-209ENST00000438191 ZNF142P52746 1687 aaPredicted RBP16.39■□□□□ 0.21
RPE-209ENST00000438191 SHANK2Q9UPX8 1470 aa16.38■□□□□ 0.21
RPE-209ENST00000438191 AGLP35573 1532 aa16.38■□□□□ 0.21
RPE-209ENST00000438191 REREQ9P2R6 1566 aa16.38■□□□□ 0.21
RPE-209ENST00000438191 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
RPE-209ENST00000438191 FAM9AQ8IZU1 332 aaPredicted RBP16.37■□□□□ 0.21
RPE-209ENST00000438191 ESF1Q9H501 851 aaKnown RBP16.37■□□□□ 0.21
RPE-209ENST00000438191 DIP2CQ9Y2E4 1556 aa16.34■□□□□ 0.21
RPE-209ENST00000438191 CNTLNQ9NXG0 1405 aa16.34■□□□□ 0.21
RPE-209ENST00000438191 MYO3AQ8NEV4 1616 aa16.34■□□□□ 0.21
RPE-209ENST00000438191 MROH2AA6NES4 1674 aa16.32■□□□□ 0.2
RPE-209ENST00000438191 CEP170BQ9Y4F5 1589 aaPredicted RBP16.32■□□□□ 0.2
RPE-209ENST00000438191 P3H3Q8IVL6 736 aa16.31■□□□□ 0.2
RPE-209ENST00000438191 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
RPE-209ENST00000438191 NUP153P49790 1475 aaKnown RBP16.3■□□□□ 0.2
RPE-209ENST00000438191 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
RPE-209ENST00000438191 KDM5CP41229 1560 aa16.29■□□□□ 0.2
RPE-209ENST00000438191 PLCH2O75038 1416 aa16.28■□□□□ 0.2
RPE-209ENST00000438191 ABCA6Q8N139 1617 aa16.27■□□□□ 0.2
RPE-209ENST00000438191 VWDEQ8N2E2 1590 aa16.27■□□□□ 0.2
RPE-209ENST00000438191 ZNF518AQ6AHZ1 1483 aa16.27■□□□□ 0.19
RPE-209ENST00000438191 NEURL4Q96JN8 1562 aa16.26■□□□□ 0.19
RPE-209ENST00000438191 POLR1AO95602 1720 aaPredicted RBP16.26■□□□□ 0.19
RPE-209ENST00000438191 ZMYM3Q14202 1370 aa16.26■□□□□ 0.19
RPE-209ENST00000438191 RNF17Q9BXT8 1623 aaKnown RBP16.23■□□□□ 0.19
RPE-209ENST00000438191 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
RPE-209ENST00000438191 SUPT5HO00267 1087 aaKnown RBP16.21■□□□□ 0.19
RPE-209ENST00000438191 MYT1LQ9UL68 1186 aa16.2■□□□□ 0.18
RPE-209ENST00000438191 DNMT1P26358 1616 aaKnown RBP16.19■□□□□ 0.18
RPE-209ENST00000438191 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
RPE-209ENST00000438191 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
RPE-209ENST00000438191 MLH3Q9UHC1 1453 aa16.18■□□□□ 0.18
RPE-209ENST00000438191 STRCP1A6NGW2 1772 aa16.18■□□□□ 0.18
RPE-209ENST00000438191 SAMD9Q5K651 1589 aa16.17■□□□□ 0.18
RPE-209ENST00000438191 MYO5CQ9NQX4 1742 aa16.16■□□□□ 0.18
RPE-209ENST00000438191 A2ML1A8K2U0 1454 aa16.16■□□□□ 0.18
RPE-209ENST00000438191 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.18
RPE-209ENST00000438191 SYNMO15061 1565 aa16.13■□□□□ 0.17
RPE-209ENST00000438191 TRIM52Q96A61 297 aa16.11■□□□□ 0.17
RPE-209ENST00000438191 KIDINS220Q9ULH0 1771 aa16.09■□□□□ 0.17
RPE-209ENST00000438191 FAM135BQ49AJ0 1406 aa16.09■□□□□ 0.17
RPE-209ENST00000438191 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
RPE-209ENST00000438191 MED14O60244 1454 aa16.07■□□□□ 0.16
RPE-209ENST00000438191 ANKLE2Q86XL3 938 aa16.05■□□□□ 0.16
RPE-209ENST00000438191 DEPDC5O75140 1603 aa16.05■□□□□ 0.16
RPE-209ENST00000438191 ARHGAP5Q13017 1502 aa16.04■□□□□ 0.16
RPE-209ENST00000438191 PRXQ9BXM0 1461 aa16.03■□□□□ 0.16
RPE-209ENST00000438191 XIRP1Q702N8 1843 aaKnown RBP16.03■□□□□ 0.16
RPE-209ENST00000438191 IQGAP1P46940 1657 aa16.02■□□□□ 0.16
RPE-209ENST00000438191 SETBP1Q9Y6X0 1596 aa16.02■□□□□ 0.16
RPE-209ENST00000438191 CDK13Q14004 1512 aaKnown RBP16.02■□□□□ 0.15
RPE-209ENST00000438191 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.01■□□□□ 0.15
RPE-209ENST00000438191 ITSN2Q9NZM3 1697 aa16.01■□□□□ 0.15
RPE-209ENST00000438191 CDK12Q9NYV4 1490 aaPredicted RBP16■□□□□ 0.15
RPE-209ENST00000438191 ABCC1P33527 1531 aa15.99■□□□□ 0.15
RPE-209ENST00000438191 ROBO1Q9Y6N7 1651 aa15.99■□□□□ 0.15
RPE-209ENST00000438191 ZNF772Q68DY9 489 aaPredicted RBP15.99■□□□□ 0.15
RPE-209ENST00000438191 KIF14Q15058 1648 aa15.97■□□□□ 0.15
RPE-209ENST00000438191 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
RPE-209ENST00000438191 RXRBP28702 533 aa15.96■□□□□ 0.15
RPE-209ENST00000438191 CDC42BPBQ9Y5S2 1711 aa15.96■□□□□ 0.15
RPE-209ENST00000438191 IFFO2Q5TF58 517 aa15.95■□□□□ 0.14
RPE-209ENST00000438191 JCADQ9P266 1359 aa15.95■□□□□ 0.14
RPE-209ENST00000438191 LRP6O75581 1613 aa15.94■□□□□ 0.14
RPE-209ENST00000438191 TNRQ92752 1358 aa15.93■□□□□ 0.14
RPE-209ENST00000438191 THEMISQ8N1K5 641 aaPredicted RBP15.93■□□□□ 0.14
RPE-209ENST00000438191 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms