RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 PREX2Q70Z35 1606 aa23.67■■□□□ 1.38
CNOT9-205ENST00000433439 PHLDB1Q86UU1 1377 aa23.66■■□□□ 1.38
CNOT9-205ENST00000433439 EFCAB2Q5VUJ9 269 aa23.66■■□□□ 1.38
CNOT9-205ENST00000433439 CDC42BPBQ9Y5S2 1711 aa23.66■■□□□ 1.38
CNOT9-205ENST00000433439 TEX14Q8IWB6 1497 aa23.66■■□□□ 1.38
CNOT9-205ENST00000433439 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
CNOT9-205ENST00000433439 FANCAO15360 1455 aa23.65■■□□□ 1.38
CNOT9-205ENST00000433439 MYOM3Q5VTT5 1437 aa23.63■■□□□ 1.37
CNOT9-205ENST00000433439 KDM4FA0A1W2PPD8 638 aa23.62■■□□□ 1.37
CNOT9-205ENST00000433439 ARAP3Q8WWN8 1544 aa23.59■■□□□ 1.37
CNOT9-205ENST00000433439 CFAP74Q9C0B2 1584 aa23.58■■□□□ 1.37
CNOT9-205ENST00000433439 AKNAQ7Z591 1439 aa23.58■■□□□ 1.36
CNOT9-205ENST00000433439 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.36
CNOT9-205ENST00000433439 NEO1Q92859 1461 aa23.57■■□□□ 1.36
CNOT9-205ENST00000433439 FGD6Q6ZV73 1430 aa23.55■■□□□ 1.36
CNOT9-205ENST00000433439 SAMD9LQ8IVG5 1584 aa23.54■■□□□ 1.36
CNOT9-205ENST00000433439 ADGRL1O94910 1474 aa23.54■■□□□ 1.36
CNOT9-205ENST00000433439 MIA2Q96PC5 1412 aa23.53■■□□□ 1.36
CNOT9-205ENST00000433439 FAM50AQ14320 339 aaKnown RBP23.53■■□□□ 1.36
CNOT9-205ENST00000433439 SCAPERQ9BY12 1400 aa23.51■■□□□ 1.35
CNOT9-205ENST00000433439 CAMSAP2Q08AD1 1489 aa23.51■■□□□ 1.35
CNOT9-205ENST00000433439 HNRNPMP52272 730 aaKnown RBP eCLIP23.51■■□□□ 1.35
CNOT9-205ENST00000433439 PTPN23Q9H3S7 1636 aa23.51■■□□□ 1.35
CNOT9-205ENST00000433439 ABCC1P33527 1531 aa23.48■■□□□ 1.35
CNOT9-205ENST00000433439 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
CNOT9-205ENST00000433439 RAPGEF3O95398 923 aa23.47■■□□□ 1.35
CNOT9-205ENST00000433439 PLEKHH2Q8IVE3 1493 aa23.47■■□□□ 1.35
CNOT9-205ENST00000433439 KDM6BO15054 1643 aa23.47■■□□□ 1.35
CNOT9-205ENST00000433439 DENND4BO75064 1496 aaPredicted RBP23.46■■□□□ 1.35
CNOT9-205ENST00000433439 ARHGEF12Q9NZN5 1544 aa23.46■■□□□ 1.35
CNOT9-205ENST00000433439 COL17A1Q9UMD9 1497 aaPredicted RBP23.45■■□□□ 1.34
CNOT9-205ENST00000433439 MYT1LQ9UL68 1186 aa23.43■■□□□ 1.34
CNOT9-205ENST00000433439 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
CNOT9-205ENST00000433439 KIAA1107Q9UPP5 1409 aa23.42■■□□□ 1.34
CNOT9-205ENST00000433439 TRAPPC8Q9Y2L5 1435 aa23.42■■□□□ 1.34
CNOT9-205ENST00000433439 AFAP1Q8N556 730 aa23.42■■□□□ 1.34
CNOT9-205ENST00000433439 ITGAEP38570 1179 aa23.41■■□□□ 1.34
CNOT9-205ENST00000433439 POGZQ7Z3K3 1410 aa23.4■■□□□ 1.34
CNOT9-205ENST00000433439 RRBP1Q9P2E9 1410 aaKnown RBP23.4■■□□□ 1.34
CNOT9-205ENST00000433439 MBD5Q9P267 1494 aa23.38■■□□□ 1.33
CNOT9-205ENST00000433439 RICTORQ6R327 1708 aa23.37■■□□□ 1.33
CNOT9-205ENST00000433439 ZNF518AQ6AHZ1 1483 aa23.36■■□□□ 1.33
CNOT9-205ENST00000433439 CCDC141Q6ZP82 1450 aa23.36■■□□□ 1.33
CNOT9-205ENST00000433439 FRMPD1Q5SYB0 1578 aa23.35■■□□□ 1.33
CNOT9-205ENST00000433439 TSPY4P0CV99 314 aa23.34■■□□□ 1.33
CNOT9-205ENST00000433439 TSPY10P0CW01 314 aa23.34■■□□□ 1.33
CNOT9-205ENST00000433439 RSPH4AQ5TD94 716 aa23.34■■□□□ 1.33
CNOT9-205ENST00000433439 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
CNOT9-205ENST00000433439 SPAG9O60271 1321 aaKnown RBP23.33■■□□□ 1.33
CNOT9-205ENST00000433439 DAPK1P53355 1430 aa23.33■■□□□ 1.32
CNOT9-205ENST00000433439 ABCC5O15440 1437 aa23.32■■□□□ 1.32
CNOT9-205ENST00000433439 DNMT1P26358 1616 aaKnown RBP23.31■■□□□ 1.32
CNOT9-205ENST00000433439 CHIC2Q9UKJ5 165 aa23.31■■□□□ 1.32
CNOT9-205ENST00000433439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.29■■□□□ 1.32
CNOT9-205ENST00000433439 KDM5CP41229 1560 aa23.29■■□□□ 1.32
CNOT9-205ENST00000433439 HECW2Q9P2P5 1572 aa23.27■■□□□ 1.32
CNOT9-205ENST00000433439 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
CNOT9-205ENST00000433439 CROCC2H7BZ55 1655 aa23.26■■□□□ 1.31
CNOT9-205ENST00000433439 ZMYM4Q5VZL5 1548 aa23.26■■□□□ 1.31
CNOT9-205ENST00000433439 YEATS2Q9ULM3 1422 aa23.25■■□□□ 1.31
CNOT9-205ENST00000433439 ATP7AQ04656 1500 aa23.24■■□□□ 1.31
CNOT9-205ENST00000433439 ZFYVE16Q7Z3T8 1539 aa23.23■■□□□ 1.31
CNOT9-205ENST00000433439 PTPRKQ15262 1439 aa23.23■■□□□ 1.31
CNOT9-205ENST00000433439 MLH3Q9UHC1 1453 aa23.23■■□□□ 1.31
CNOT9-205ENST00000433439 KIDINS220Q9ULH0 1771 aa23.22■■□□□ 1.31
CNOT9-205ENST00000433439 INO80Q9ULG1 1556 aaPredicted RBP23.22■■□□□ 1.31
CNOT9-205ENST00000433439 SHANK2Q9UPX8 1470 aa23.21■■□□□ 1.31
CNOT9-205ENST00000433439 MAGI2Q86UL8 1455 aa23.2■■□□□ 1.3
CNOT9-205ENST00000433439 MAST1Q9Y2H9 1570 aa23.19■■□□□ 1.3
CNOT9-205ENST00000433439 RTEL1-TNFRSF6BF6WH68 1400 aa23.19■■□□□ 1.3
CNOT9-205ENST00000433439 RRP7BPQ9NSQ0 103 aa23.19■■□□□ 1.3
CNOT9-205ENST00000433439 ABCA6Q8N139 1617 aa23.18■■□□□ 1.3
CNOT9-205ENST00000433439 ANKRD30AQ9BXX3 1397 aa23.17■■□□□ 1.3
CNOT9-205ENST00000433439 TRIM26Q12899 539 aaPredicted RBP23.17■■□□□ 1.3
CNOT9-205ENST00000433439 ARHGEF40Q8TER5 1519 aa23.17■■□□□ 1.3
CNOT9-205ENST00000433439 DIP2CQ9Y2E4 1556 aa23.16■■□□□ 1.3
CNOT9-205ENST00000433439 ADGBQ8N7X0 1667 aa23.16■■□□□ 1.3
CNOT9-205ENST00000433439 ATP10AO60312 1499 aa23.13■■□□□ 1.29
CNOT9-205ENST00000433439 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
CNOT9-205ENST00000433439 NCOA1Q15788 1441 aa23.12■■□□□ 1.29
CNOT9-205ENST00000433439 ADGRL2O95490 1459 aa23.11■■□□□ 1.29
CNOT9-205ENST00000433439 ARID4BQ4LE39 1312 aaPredicted RBP23.11■■□□□ 1.29
CNOT9-205ENST00000433439 PLXNC1O60486 1568 aa23.11■■□□□ 1.29
CNOT9-205ENST00000433439 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
CNOT9-205ENST00000433439 A2MP01023 1474 aa23.1■■□□□ 1.29
CNOT9-205ENST00000433439 ROCK1Q13464 1354 aa23.09■■□□□ 1.29
CNOT9-205ENST00000433439 DHX29Q7Z478 1369 aaKnown RBP23.06■■□□□ 1.28
CNOT9-205ENST00000433439 DUOX2Q9NRD8 1548 aa23.05■■□□□ 1.28
CNOT9-205ENST00000433439 MLECQ14165 292 aa23.04■■□□□ 1.28
CNOT9-205ENST00000433439 KIF3BO15066 747 aa23.03■■□□□ 1.28
CNOT9-205ENST00000433439 SIGLEC1Q9BZZ2 1709 aa23.02■■□□□ 1.28
CNOT9-205ENST00000433439 ANKRD50Q9ULJ7 1429 aa23■■□□□ 1.27
CNOT9-205ENST00000433439 PCGF6Q9BYE7 350 aa23■■□□□ 1.27
CNOT9-205ENST00000433439 REREQ9P2R6 1566 aa23■■□□□ 1.27
CNOT9-205ENST00000433439 NAIPQ13075 1403 aa22.99■■□□□ 1.27
CNOT9-205ENST00000433439 HFM1A2PYH4 1435 aa22.99■■□□□ 1.27
CNOT9-205ENST00000433439 GGT6Q6P531 493 aa22.98■■□□□ 1.27
CNOT9-205ENST00000433439 ERBINQ96RT1 1412 aa22.98■■□□□ 1.27
CNOT9-205ENST00000433439 GCC2Q8IWJ2 1684 aa22.97■■□□□ 1.27
CNOT9-205ENST00000433439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms