RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 KIAA0586Q9BVV6 1533 aa15.71■□□□□ 0.11
CLDN4-202ENST00000431918 ABCA5Q8WWZ7 1642 aa15.71■□□□□ 0.11
CLDN4-202ENST00000431918 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLDN4-202ENST00000431918 HECW1Q76N89 1606 aa15.7■□□□□ 0.1
CLDN4-202ENST00000431918 IRX6P78412 446 aaPredicted RBP15.7■□□□□ 0.1
CLDN4-202ENST00000431918 CFAP43Q8NDM7 1665 aa15.69■□□□□ 0.1
CLDN4-202ENST00000431918 NUP155O75694 1391 aa15.68■□□□□ 0.1
CLDN4-202ENST00000431918 SUPT16HQ9Y5B9 1047 aaKnown RBP15.68■□□□□ 0.1
CLDN4-202ENST00000431918 GRIN2AQ12879 1464 aa15.68■□□□□ 0.1
CLDN4-202ENST00000431918 PTPRGP23470 1445 aa15.68■□□□□ 0.1
CLDN4-202ENST00000431918 PLB1Q6P1J6 1458 aa15.67■□□□□ 0.1
CLDN4-202ENST00000431918 ANKRD30AQ9BXX3 1397 aa15.67■□□□□ 0.1
CLDN4-202ENST00000431918 PTPN23Q9H3S7 1636 aa15.66■□□□□ 0.1
CLDN4-202ENST00000431918 DCAF11Q8TEB1 546 aa15.66■□□□□ 0.1
CLDN4-202ENST00000431918 CARD11Q9BXL7 1154 aa15.66■□□□□ 0.1
CLDN4-202ENST00000431918 THOC2Q8NI27 1593 aaKnown RBP15.65■□□□□ 0.1
CLDN4-202ENST00000431918 TARBP1Q13395 1621 aaKnown RBP15.63■□□□□ 0.09
CLDN4-202ENST00000431918 ADAMTS12P58397 1594 aa15.62■□□□□ 0.09
CLDN4-202ENST00000431918 MIA2Q96PC5 1412 aa15.62■□□□□ 0.09
CLDN4-202ENST00000431918 CCER2I3L3R5 266 aa15.62■□□□□ 0.09
CLDN4-202ENST00000431918 SALL2Q9Y467 1007 aaPredicted RBP15.61■□□□□ 0.09
CLDN4-202ENST00000431918 TROQ12816 1431 aaPredicted RBP15.6■□□□□ 0.09
CLDN4-202ENST00000431918 DAPK1P53355 1430 aa15.59■□□□□ 0.09
CLDN4-202ENST00000431918 SYNJ2O15056 1496 aa15.59■□□□□ 0.09
CLDN4-202ENST00000431918 SAMD9Q5K651 1589 aa15.59■□□□□ 0.09
CLDN4-202ENST00000431918 UGGT2Q9NYU1 1516 aa15.58■□□□□ 0.09
CLDN4-202ENST00000431918 PBRM1Q86U86 1689 aa15.58■□□□□ 0.09
CLDN4-202ENST00000431918 CHGAP10645 457 aaKnown RBP15.58■□□□□ 0.08
CLDN4-202ENST00000431918 MAGI3Q5TCQ9 1506 aa15.57■□□□□ 0.08
CLDN4-202ENST00000431918 NPM1P06748 294 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLDN4-202ENST00000431918 NBPF8Q3BBV2 869 aa15.57■□□□□ 0.08
CLDN4-202ENST00000431918 TMC1Q8TDI8 760 aa15.57■□□□□ 0.08
CLDN4-202ENST00000431918 WASHC2AQ641Q2 1341 aa15.56■□□□□ 0.08
CLDN4-202ENST00000431918 ABCC5O15440 1437 aa15.56■□□□□ 0.08
CLDN4-202ENST00000431918 MAGI1Q96QZ7 1491 aaPredicted RBP15.56■□□□□ 0.08
CLDN4-202ENST00000431918 NUP153P49790 1475 aaKnown RBP15.55■□□□□ 0.08
CLDN4-202ENST00000431918 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
CLDN4-202ENST00000431918 SENP3Q9H4L4 574 aaPredicted RBP15.53■□□□□ 0.08
CLDN4-202ENST00000431918 ANKRD50Q9ULJ7 1429 aa15.53■□□□□ 0.08
CLDN4-202ENST00000431918 WDR62O43379 1518 aa15.52■□□□□ 0.07
CLDN4-202ENST00000431918 DISP1Q96F81 1524 aa15.51■□□□□ 0.07
CLDN4-202ENST00000431918 KIF15Q9NS87 1388 aa15.51■□□□□ 0.07
CLDN4-202ENST00000431918 EFCAB2Q5VUJ9 269 aa15.5■□□□□ 0.07
CLDN4-202ENST00000431918 ARHGEF11O15085 1522 aa15.49■□□□□ 0.07
CLDN4-202ENST00000431918 KIAA0556O60303 1618 aa15.49■□□□□ 0.07
CLDN4-202ENST00000431918 CAMSAP2Q08AD1 1489 aa15.48■□□□□ 0.07
CLDN4-202ENST00000431918 RAPGEF6Q8TEU7 1601 aa15.47■□□□□ 0.07
CLDN4-202ENST00000431918 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
CLDN4-202ENST00000431918 ST20-MTHFSA0A0A6YYL1 179 aa15.46■□□□□ 0.07
CLDN4-202ENST00000431918 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
CLDN4-202ENST00000431918 KIF7Q2M1P5 1343 aa15.45■□□□□ 0.06
CLDN4-202ENST00000431918 ROCK1Q13464 1354 aa15.45■□□□□ 0.06
CLDN4-202ENST00000431918 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
CLDN4-202ENST00000431918 C9orf84Q5VXU9 1444 aa15.45■□□□□ 0.06
CLDN4-202ENST00000431918 USP47Q96K76 1375 aa15.44■□□□□ 0.06
CLDN4-202ENST00000431918 GPATCH8Q9UKJ3 1502 aaKnown RBP15.44■□□□□ 0.06
CLDN4-202ENST00000431918 CCDC7Q96M83 1385 aa15.44■□□□□ 0.06
CLDN4-202ENST00000431918 ROCK2O75116 1388 aaKnown RBP15.44■□□□□ 0.06
CLDN4-202ENST00000431918 RSPH4AQ5TD94 716 aa15.44■□□□□ 0.06
CLDN4-202ENST00000431918 NCOA1Q15788 1441 aa15.43■□□□□ 0.06
CLDN4-202ENST00000431918 CCDC184Q52MB2 194 aa15.43■□□□□ 0.06
CLDN4-202ENST00000431918 AKNAQ7Z591 1439 aa15.43■□□□□ 0.06
CLDN4-202ENST00000431918 TCOF1Q13428 1488 aaKnown RBP15.42■□□□□ 0.06
CLDN4-202ENST00000431918 CC2D1BQ5T0F9 858 aaKnown RBP15.41■□□□□ 0.06
CLDN4-202ENST00000431918 SPAG9O60271 1321 aaKnown RBP15.41■□□□□ 0.06
CLDN4-202ENST00000431918 ATP10BO94823 1461 aa15.4■□□□□ 0.06
CLDN4-202ENST00000431918 KIAA1107Q9UPP5 1409 aa15.4■□□□□ 0.06
CLDN4-202ENST00000431918 AFAP1Q8N556 730 aa15.39■□□□□ 0.05
CLDN4-202ENST00000431918 KIF3BO15066 747 aa15.39■□□□□ 0.05
CLDN4-202ENST00000431918 CEP170Q5SW79 1584 aa15.39■□□□□ 0.05
CLDN4-202ENST00000431918 ARHGAP5Q13017 1502 aa15.38■□□□□ 0.05
CLDN4-202ENST00000431918 CCDC144AA2RUR9 1427 aa15.38■□□□□ 0.05
CLDN4-202ENST00000431918 KDM6BO15054 1643 aa15.36■□□□□ 0.05
CLDN4-202ENST00000431918 CNTLNQ9NXG0 1405 aa15.36■□□□□ 0.05
CLDN4-202ENST00000431918 LRRIQ1Q96JM4 1722 aa15.35■□□□□ 0.05
CLDN4-202ENST00000431918 GGT6Q6P531 493 aa15.35■□□□□ 0.05
CLDN4-202ENST00000431918 NUP160Q12769 1436 aa15.35■□□□□ 0.05
CLDN4-202ENST00000431918 RPRD2Q5VT52 1461 aaKnown RBP15.34■□□□□ 0.05
CLDN4-202ENST00000431918 NBPF1Q3BBV0 1214 aa15.33■□□□□ 0.04
CLDN4-202ENST00000431918 KIF14Q15058 1648 aa15.33■□□□□ 0.04
CLDN4-202ENST00000431918 B4GALNT3Q6L9W6 998 aa15.32■□□□□ 0.04
CLDN4-202ENST00000431918 TMF1P82094 1093 aa15.31■□□□□ 0.04
CLDN4-202ENST00000431918 TSHZ2Q9NRE2 1034 aa15.3■□□□□ 0.04
CLDN4-202ENST00000431918 CCDC136Q96JN2 1154 aa15.29■□□□□ 0.04
CLDN4-202ENST00000431918 KNSTRNQ9Y448 316 aa15.28■□□□□ 0.04
CLDN4-202ENST00000431918 DNMT1P26358 1616 aaKnown RBP15.27■□□□□ 0.04
CLDN4-202ENST00000431918 KANK1Q14678 1352 aa15.27■□□□□ 0.04
CLDN4-202ENST00000431918 CCDC141Q6ZP82 1450 aa15.26■□□□□ 0.03
CLDN4-202ENST00000431918 WDR43Q15061 677 aaKnown RBP eCLIP15.26■□□□□ 0.03
CLDN4-202ENST00000431918 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
CLDN4-202ENST00000431918 PZPP20742 1482 aa15.24■□□□□ 0.03
CLDN4-202ENST00000431918 ITSN2Q9NZM3 1697 aa15.23■□□□□ 0.03
CLDN4-202ENST00000431918 NUTM2DQ5VT03 806 aaPredicted RBP15.23■□□□□ 0.03
CLDN4-202ENST00000431918 PANK3Q9H999 370 aa15.23■□□□□ 0.03
CLDN4-202ENST00000431918 OSCARQ8IYS5 282 aa15.23■□□□□ 0.03
CLDN4-202ENST00000431918 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CLDN4-202ENST00000431918 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
CLDN4-202ENST00000431918 GCC2Q8IWJ2 1684 aa15.22■□□□□ 0.03
CLDN4-202ENST00000431918 TNNT2P45379 298 aaPredicted RBP15.22■□□□□ 0.03
CLDN4-202ENST00000431918 PLEKHH2Q8IVE3 1493 aa15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms