RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MYOM3Q5VTT5 1437 aa27.79■■■□□ 2.04
HMGN1-206ENST00000431390 CCNB3Q8WWL7 1395 aa27.79■■■□□ 2.04
HMGN1-206ENST00000431390 ABCA9Q8IUA7 1624 aa27.79■■■□□ 2.04
HMGN1-206ENST00000431390 FGD6Q6ZV73 1430 aa27.75■■■□□ 2.03
HMGN1-206ENST00000431390 ITSN2Q9NZM3 1697 aa27.71■■■□□ 2.03
HMGN1-206ENST00000431390 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.71■■■□□ 2.03
HMGN1-206ENST00000431390 MIA2Q96PC5 1412 aa27.7■■■□□ 2.02
HMGN1-206ENST00000431390 ADAMTSL3P82987 1691 aa27.67■■■□□ 2.02
HMGN1-206ENST00000431390 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
HMGN1-206ENST00000431390 CDC42BPAQ5VT25 1732 aa27.64■■■□□ 2.01
HMGN1-206ENST00000431390 GPATCH8Q9UKJ3 1502 aaKnown RBP27.63■■■□□ 2.01
HMGN1-206ENST00000431390 TCOF1Q13428 1488 aaKnown RBP27.63■■■□□ 2.01
HMGN1-206ENST00000431390 FRMPD1Q5SYB0 1578 aa27.63■■■□□ 2.01
HMGN1-206ENST00000431390 RAPGEF3O95398 923 aa27.62■■■□□ 2.01
HMGN1-206ENST00000431390 NEO1Q92859 1461 aa27.62■■■□□ 2.01
HMGN1-206ENST00000431390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.011e-6■■■■□ 20.1
HMGN1-206ENST00000431390 PTPRMP28827 1452 aa27.6■■■□□ 2.01
HMGN1-206ENST00000431390 BCORL1Q5H9F3 1711 aa27.59■■■□□ 2.01
HMGN1-206ENST00000431390 TTC37Q6PGP7 1564 aa27.58■■■□□ 2.01
HMGN1-206ENST00000431390 FAM50AQ14320 339 aaKnown RBP27.58■■■□□ 2.01
HMGN1-206ENST00000431390 PREX2Q70Z35 1606 aa27.56■■■□□ 2
HMGN1-206ENST00000431390 MYO5CQ9NQX4 1742 aa27.55■■■□□ 2
HMGN1-206ENST00000431390 MADDQ8WXG6 1647 aa27.55■■■□□ 2
HMGN1-206ENST00000431390 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
HMGN1-206ENST00000431390 CDC42BPBQ9Y5S2 1711 aa27.52■■■□□ 2
HMGN1-206ENST00000431390 RICTORQ6R327 1708 aa27.51■■□□□ 1.99
HMGN1-206ENST00000431390 ARHGEF40Q8TER5 1519 aa27.49■■□□□ 1.99
HMGN1-206ENST00000431390 ARID4BQ4LE39 1312 aaPredicted RBP27.47■■□□□ 1.99
HMGN1-206ENST00000431390 CAMSAP2Q08AD1 1489 aa27.47■■□□□ 1.99
HMGN1-206ENST00000431390 RIMS1Q86UR5 1692 aaKnown RBP27.46■■□□□ 1.99
HMGN1-206ENST00000431390 CFAP74Q9C0B2 1584 aa27.45■■□□□ 1.98
HMGN1-206ENST00000431390 PLCH2O75038 1416 aa27.44■■□□□ 1.98
HMGN1-206ENST00000431390 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
HMGN1-206ENST00000431390 ITGAEP38570 1179 aa27.43■■□□□ 1.98
HMGN1-206ENST00000431390 ARHGAP5Q13017 1502 aa27.42■■□□□ 1.98
HMGN1-206ENST00000431390 DNMT1P26358 1616 aaKnown RBP27.42■■□□□ 1.98
HMGN1-206ENST00000431390 AKNAQ7Z591 1439 aa27.41■■□□□ 1.98
HMGN1-206ENST00000431390 FANCAO15360 1455 aa27.4■■□□□ 1.98
HMGN1-206ENST00000431390 ZNF644Q9H582 1327 aaPredicted RBP27.4■■□□□ 1.98
HMGN1-206ENST00000431390 FBXO41Q8TF61 875 aa27.39■■□□□ 1.98
HMGN1-206ENST00000431390 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
HMGN1-206ENST00000431390 LMTK3Q96Q04 1460 aa27.39■■□□□ 1.97
HMGN1-206ENST00000431390 ZNF777Q9ULD5 760 aaPredicted RBP27.37■■□□□ 1.97
HMGN1-206ENST00000431390 SIGLEC1Q9BZZ2 1709 aa27.37■■□□□ 1.97
HMGN1-206ENST00000431390 DAPK1P53355 1430 aa27.36■■□□□ 1.97
HMGN1-206ENST00000431390 PTPRKQ15262 1439 aa27.36■■□□□ 1.97
HMGN1-206ENST00000431390 ZMYM4Q5VZL5 1548 aa27.34■■□□□ 1.97
HMGN1-206ENST00000431390 PLEKHH2Q8IVE3 1493 aa27.34■■□□□ 1.97
HMGN1-206ENST00000431390 ABCC5O15440 1437 aa27.34■■□□□ 1.97
HMGN1-206ENST00000431390 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
HMGN1-206ENST00000431390 CROCC2H7BZ55 1655 aa27.33■■□□□ 1.97
HMGN1-206ENST00000431390 EFCAB2Q5VUJ9 269 aa27.32■■□□□ 1.96
HMGN1-206ENST00000431390 ZFYVE16Q7Z3T8 1539 aa27.32■■□□□ 1.96
HMGN1-206ENST00000431390 KIAA1107Q9UPP5 1409 aa27.3■■□□□ 1.96
HMGN1-206ENST00000431390 YEATS2Q9ULM3 1422 aa27.29■■□□□ 1.96
HMGN1-206ENST00000431390 MBD5Q9P267 1494 aa27.28■■□□□ 1.96
HMGN1-206ENST00000431390 PLPPR3Q6T4P5 718 aa27.26■■□□□ 1.96
HMGN1-206ENST00000431390 POGZQ7Z3K3 1410 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 SHANK2Q9UPX8 1470 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 ABCC1P33527 1531 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 SYCP2Q9BX26 1530 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 FER1L4A9Z1Z3 1794 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 RSPH4AQ5TD94 716 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 HFM1A2PYH4 1435 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 SETD5Q9C0A6 1442 aa27.26■■□□□ 1.95
HMGN1-206ENST00000431390 ROCK1Q13464 1354 aa27.25■■□□□ 1.95
HMGN1-206ENST00000431390 ADGBQ8N7X0 1667 aa27.25■■□□□ 1.95
HMGN1-206ENST00000431390 CCDC141Q6ZP82 1450 aa27.24■■□□□ 1.95
HMGN1-206ENST00000431390 GCC2Q8IWJ2 1684 aa27.22■■□□□ 1.95
HMGN1-206ENST00000431390 MAGI2Q86UL8 1455 aa27.22■■□□□ 1.95
HMGN1-206ENST00000431390 HSPA2P54652 639 aa27.22■■□□□ 1.95
HMGN1-206ENST00000431390 HNRNPMP52272 730 aaKnown RBP eCLIP27.21■■□□□ 1.95
HMGN1-206ENST00000431390 ADGRL2O95490 1459 aa27.21■■□□□ 1.95
HMGN1-206ENST00000431390 NAIPQ13075 1403 aa27.19■■□□□ 1.94
HMGN1-206ENST00000431390 SCAPERQ9BY12 1400 aa27.19■■□□□ 1.94
HMGN1-206ENST00000431390 ARHGEF12Q9NZN5 1544 aa27.19■■□□□ 1.94
HMGN1-206ENST00000431390 RAB3GAP2Q9H2M9 1393 aa27.18■■□□□ 1.94
HMGN1-206ENST00000431390 HRCP23327 699 aa27.18■■□□□ 1.94
HMGN1-206ENST00000431390 MLECQ14165 292 aa27.18■■□□□ 1.94
HMGN1-206ENST00000431390 CHIC2Q9UKJ5 165 aa27.18■■□□□ 1.94
HMGN1-206ENST00000431390 MAST1Q9Y2H9 1570 aa27.17■■□□□ 1.94
HMGN1-206ENST00000431390 C9orf84Q5VXU9 1444 aa27.16■■□□□ 1.94
HMGN1-206ENST00000431390 TSPY4P0CV99 314 aa27.15■■□□□ 1.94
HMGN1-206ENST00000431390 TSPY10P0CW01 314 aa27.15■■□□□ 1.94
HMGN1-206ENST00000431390 NCOA1Q15788 1441 aa27.13■■□□□ 1.93
HMGN1-206ENST00000431390 ANKRD30AQ9BXX3 1397 aa27.12■■□□□ 1.93
HMGN1-206ENST00000431390 RRP7BPQ9NSQ0 103 aa27.1■■□□□ 1.93
HMGN1-206ENST00000431390 TRAPPC8Q9Y2L5 1435 aa27.09■■□□□ 1.93
HMGN1-206ENST00000431390 ATP10AO60312 1499 aa27.09■■□□□ 1.93
HMGN1-206ENST00000431390 PREX1Q8TCU6 1659 aa27.07■■□□□ 1.92
HMGN1-206ENST00000431390 PLXNC1O60486 1568 aa27.06■■□□□ 1.92
HMGN1-206ENST00000431390 CCER1Q8TC90 406 aaPredicted RBP27.05■■□□□ 1.92
HMGN1-206ENST00000431390 RTEL1-TNFRSF6BF6WH68 1400 aa27.02■■□□□ 1.92
HMGN1-206ENST00000431390 ACIN1Q9UKV3 1341 aaKnown RBP27.02■■□□□ 1.92
HMGN1-206ENST00000431390 ZNF518AQ6AHZ1 1483 aa27.02■■□□□ 1.92
HMGN1-206ENST00000431390 KDM5CP41229 1560 aa27.01■■□□□ 1.91
HMGN1-206ENST00000431390 DHX57Q6P158 1386 aaKnown RBP27■■□□□ 1.91
HMGN1-206ENST00000431390 INO80Q9ULG1 1556 aaPredicted RBP26.99■■□□□ 1.91
HMGN1-206ENST00000431390 KIF15Q9NS87 1388 aa26.99■■□□□ 1.91
HMGN1-206ENST00000431390 CEBPAP49715 358 aaPredicted RBP26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms