RNA–Protein interactions for RNA: ENST00000429136.5

ATP13A3-202, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-202ENST00000429136 L3MBTL2Q969R5 705 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 BCANQ96GW7 911 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 ROCK1Q13464 1354 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 FKBP8Q14318 412 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 FOXD1Q16676 465 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 PBRM1Q86U86 1689 aa7.42□□□□□ -1.22
ATP13A3-202ENST00000429136 WDR62O43379 1518 aa7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 TCOF1Q13428 1488 aaKnown RBP7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 PTPRKQ15262 1439 aa7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 DAPK1P53355 1430 aa7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 CNGB1Q14028 1251 aaPredicted RBP7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 PTPRGP23470 1445 aa7.41□□□□□ -1.22
ATP13A3-202ENST00000429136 PKD2Q13563 968 aa7.4□□□□□ -1.22
ATP13A3-202ENST00000429136 RSPH4AQ5TD94 716 aa7.4□□□□□ -1.22
ATP13A3-202ENST00000429136 ZNF644Q9H582 1327 aaPredicted RBP7.4□□□□□ -1.22
ATP13A3-202ENST00000429136 SUPT16HQ9Y5B9 1047 aaKnown RBP7.4□□□□□ -1.22
ATP13A3-202ENST00000429136 MRS2Q9HD23 443 aa7.4□□□□□ -1.23
ATP13A3-202ENST00000429136 PRG4Q92954 1404 aaPredicted RBP7.39□□□□□ -1.23
ATP13A3-202ENST00000429136 NUP155O75694 1391 aa7.39□□□□□ -1.23
ATP13A3-202ENST00000429136 KIAA0556O60303 1618 aa7.38□□□□□ -1.23
ATP13A3-202ENST00000429136 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.38□□□□□ -1.23
ATP13A3-202ENST00000429136 KDM2AQ9Y2K7 1162 aa7.38□□□□□ -1.23
ATP13A3-202ENST00000429136 FAM9BQ8IZU0 186 aa7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 RAPGEF6Q8TEU7 1601 aa7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 ABCC5O15440 1437 aa7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 KCNH8Q96L42 1107 aa7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 NUP153P49790 1475 aaKnown RBP7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 CARD11Q9BXL7 1154 aa7.37□□□□□ -1.23
ATP13A3-202ENST00000429136 EIF4G3O43432 1585 aaKnown RBP7.36□□□□□ -1.23
ATP13A3-202ENST00000429136 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
ATP13A3-202ENST00000429136 ANKRD50Q9ULJ7 1429 aa7.36□□□□□ -1.23
ATP13A3-202ENST00000429136 DISP1Q96F81 1524 aa7.35□□□□□ -1.23
ATP13A3-202ENST00000429136 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.23
ATP13A3-202ENST00000429136 CAMSAP2Q08AD1 1489 aa7.35□□□□□ -1.23
ATP13A3-202ENST00000429136 ARHGEF11O15085 1522 aa7.35□□□□□ -1.23
ATP13A3-202ENST00000429136 MAGI3Q5TCQ9 1506 aa7.35□□□□□ -1.23
ATP13A3-202ENST00000429136 ERICH6Q7L0X2 663 aa7.34□□□□□ -1.23
ATP13A3-202ENST00000429136 EFCAB2Q5VUJ9 269 aa7.34□□□□□ -1.24
ATP13A3-202ENST00000429136 TMC1Q8TDI8 760 aa7.34□□□□□ -1.24
ATP13A3-202ENST00000429136 ANKRD30BQ9BXX2 1392 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 KIAA1107Q9UPP5 1409 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 KIF15Q9NS87 1388 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 NUP160Q12769 1436 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 C9orf84Q5VXU9 1444 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 NPM1P06748 294 aaKnown RBP eCLIP7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 CNTLNQ9NXG0 1405 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 CCDC7Q96M83 1385 aa7.33□□□□□ -1.24
ATP13A3-202ENST00000429136 DCAF11Q8TEB1 546 aa7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 GPATCH8Q9UKJ3 1502 aaKnown RBP7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 NCOA1Q15788 1441 aa7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 WASHC2AQ641Q2 1341 aa7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 ROCK2O75116 1388 aaKnown RBP7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 KIF14Q15058 1648 aa7.32□□□□□ -1.24
ATP13A3-202ENST00000429136 RGL3Q3MIN7 710 aa7.31□□□□□ -1.24
ATP13A3-202ENST00000429136 RPRD2Q5VT52 1461 aaKnown RBP7.31□□□□□ -1.24
ATP13A3-202ENST00000429136 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
ATP13A3-202ENST00000429136 USP47Q96K76 1375 aa7.31□□□□□ -1.24
ATP13A3-202ENST00000429136 GCC2Q8IWJ2 1684 aa7.31□□□□□ -1.24
ATP13A3-202ENST00000429136 DNMT1P26358 1616 aaKnown RBP7.3□□□□□ -1.24
ATP13A3-202ENST00000429136 PRKRIP1Q9H875 184 aaPredicted RBP7.3□□□□□ -1.24
ATP13A3-202ENST00000429136 ARID4BQ4LE39 1312 aaPredicted RBP7.3□□□□□ -1.24
ATP13A3-202ENST00000429136 NBPF8Q3BBV2 869 aa7.3□□□□□ -1.24
ATP13A3-202ENST00000429136 CCDC144AA2RUR9 1427 aa7.29□□□□□ -1.24
ATP13A3-202ENST00000429136 PLEKHH2Q8IVE3 1493 aa7.29□□□□□ -1.24
ATP13A3-202ENST00000429136 KIF7Q2M1P5 1343 aa7.29□□□□□ -1.24
ATP13A3-202ENST00000429136 ATP10BO94823 1461 aa7.28□□□□□ -1.24
ATP13A3-202ENST00000429136 CEP170Q5SW79 1584 aa7.28□□□□□ -1.24
ATP13A3-202ENST00000429136 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
ATP13A3-202ENST00000429136 CCDC141Q6ZP82 1450 aa7.28□□□□□ -1.24
ATP13A3-202ENST00000429136 ARHGAP5Q13017 1502 aa7.27□□□□□ -1.24
ATP13A3-202ENST00000429136 KANK1Q14678 1352 aa7.27□□□□□ -1.25
ATP13A3-202ENST00000429136 CDCA8Q53HL2 280 aa7.27□□□□□ -1.25
ATP13A3-202ENST00000429136 ADGRL2O95490 1459 aa7.27□□□□□ -1.25
ATP13A3-202ENST00000429136 SPAG9O60271 1321 aaKnown RBP7.27□□□□□ -1.25
ATP13A3-202ENST00000429136 SHANK2Q9UPX8 1470 aa7.26□□□□□ -1.25
ATP13A3-202ENST00000429136 TMF1P82094 1093 aa7.26□□□□□ -1.25
ATP13A3-202ENST00000429136 RALBP1Q15311 655 aa7.26□□□□□ -1.25
ATP13A3-202ENST00000429136 IRX6P78412 446 aaPredicted RBP7.25□□□□□ -1.25
ATP13A3-202ENST00000429136 PPP4R2Q9NY27 417 aa7.25□□□□□ -1.25
ATP13A3-202ENST00000429136 LRRIQ1Q96JM4 1722 aa7.25□□□□□ -1.25
ATP13A3-202ENST00000429136 ST20-MTHFSA0A0A6YYL1 179 aa7.25□□□□□ -1.25
ATP13A3-202ENST00000429136 ZBED9Q6R2W3 1325 aa7.24□□□□□ -1.25
ATP13A3-202ENST00000429136 SLC24A1O60721 1099 aa7.24□□□□□ -1.25
ATP13A3-202ENST00000429136 PZPP20742 1482 aa7.24□□□□□ -1.25
ATP13A3-202ENST00000429136 KTN1Q86UP2 1357 aaKnown RBP7.23□□□□□ -1.25
ATP13A3-202ENST00000429136 ABCA8O94911 1581 aa7.23□□□□□ -1.25
ATP13A3-202ENST00000429136 CHGAP10645 457 aaKnown RBP7.23□□□□□ -1.25
ATP13A3-202ENST00000429136 TEX14Q8IWB6 1497 aa7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 KDM6BO15054 1643 aa7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 TSHZ2Q9NRE2 1034 aa7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 C11orf95C9JLR9 678 aaPredicted RBP7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 STAC3Q96MF2 364 aa7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 KNSTRNQ9Y448 316 aa7.22□□□□□ -1.25
ATP13A3-202ENST00000429136 MYBBP1AQ9BQG0 1328 aaKnown RBP7.21□□□□□ -1.25
ATP13A3-202ENST00000429136 CCDC136Q96JN2 1154 aa7.21□□□□□ -1.25
ATP13A3-202ENST00000429136 ADGBQ8N7X0 1667 aa7.21□□□□□ -1.25
ATP13A3-202ENST00000429136 ABCC10Q5T3U5 1492 aa7.21□□□□□ -1.26
ATP13A3-202ENST00000429136 WDR43Q15061 677 aaKnown RBP eCLIP7.21□□□□□ -1.26
ATP13A3-202ENST00000429136 NLRP13Q86W25 1043 aa7.21□□□□□ -1.26
ATP13A3-202ENST00000429136 KIF3BO15066 747 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms