RNA–Protein interactions for RNA: ENST00000428878.6

HIPK2-203, Transcript of homeodomain interacting protein kinase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIPK2, Length 3,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK2-203ENST00000428878 CCDC18Q5T9S5 1454 aa15.46■□□□□ 0.07
HIPK2-203ENST00000428878 EFCAB2Q5VUJ9 269 aa15.46■□□□□ 0.06
HIPK2-203ENST00000428878 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
HIPK2-203ENST00000428878 CFAP43Q8NDM7 1665 aa15.45■□□□□ 0.06
HIPK2-203ENST00000428878 NUP155O75694 1391 aa15.45■□□□□ 0.06
HIPK2-203ENST00000428878 KIF3BO15066 747 aa15.44■□□□□ 0.06
HIPK2-203ENST00000428878 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
HIPK2-203ENST00000428878 ESF1Q9H501 851 aaKnown RBP15.43■□□□□ 0.06
HIPK2-203ENST00000428878 TIAM1Q13009 1591 aa15.42■□□□□ 0.06
HIPK2-203ENST00000428878 MYOM3Q5VTT5 1437 aa15.41■□□□□ 0.06
HIPK2-203ENST00000428878 CEP170Q5SW79 1584 aa15.41■□□□□ 0.06
HIPK2-203ENST00000428878 FYCO1Q9BQS8 1478 aa15.4■□□□□ 0.06
HIPK2-203ENST00000428878 EPRSP07814 1512 aaKnown RBP15.4■□□□□ 0.06
HIPK2-203ENST00000428878 L3MBTL2Q969R5 705 aa15.4■□□□□ 0.06
HIPK2-203ENST00000428878 ANP32CO43423 234 aa15.39■□□□□ 0.05
HIPK2-203ENST00000428878 FAM69CQ0P6D2 419 aa15.39■□□□□ 0.05
HIPK2-203ENST00000428878 SALL2Q9Y467 1007 aaPredicted RBP15.39■□□□□ 0.05
HIPK2-203ENST00000428878 MAGI1Q96QZ7 1491 aaPredicted RBP15.38■□□□□ 0.05
HIPK2-203ENST00000428878 SPAG9O60271 1321 aaKnown RBP15.37■□□□□ 0.05
HIPK2-203ENST00000428878 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
HIPK2-203ENST00000428878 ERCC6L2Q5T890 1561 aa15.36■□□□□ 0.05
HIPK2-203ENST00000428878 RAPGEF3O95398 923 aa15.35■□□□□ 0.05
HIPK2-203ENST00000428878 LRRIQ1Q96JM4 1722 aa15.34■□□□□ 0.05
HIPK2-203ENST00000428878 PPRC1Q5VV67 1664 aaKnown RBP15.34■□□□□ 0.05
HIPK2-203ENST00000428878 UGGT2Q9NYU1 1516 aa15.34■□□□□ 0.05
HIPK2-203ENST00000428878 SAFB2Q14151 953 aaKnown RBP eCLIP15.33■□□□□ 0.04
HIPK2-203ENST00000428878 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
HIPK2-203ENST00000428878 FAM9BQ8IZU0 186 aa15.33■□□□□ 0.04
HIPK2-203ENST00000428878 EIF4G2P78344 907 aaKnown RBP eCLIP15.33■□□□□ 0.046e-7■■■■■ 37.2
HIPK2-203ENST00000428878 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
HIPK2-203ENST00000428878 CARD11Q9BXL7 1154 aa15.32■□□□□ 0.04
HIPK2-203ENST00000428878 PPP1R15AO75807 674 aaPredicted RBP15.3■□□□□ 0.04
HIPK2-203ENST00000428878 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
HIPK2-203ENST00000428878 PTPRKQ15262 1439 aa15.29■□□□□ 0.04
HIPK2-203ENST00000428878 HSPA5P11021 654 aaKnown RBP15.28■□□□□ 0.04
HIPK2-203ENST00000428878 TROQ12816 1431 aaPredicted RBP15.28■□□□□ 0.04
HIPK2-203ENST00000428878 UACAQ9BZF9 1416 aa15.28■□□□□ 0.04
HIPK2-203ENST00000428878 NUP160Q12769 1436 aa15.27■□□□□ 0.04
HIPK2-203ENST00000428878 NUP153P49790 1475 aaKnown RBP15.26■□□□□ 0.03
HIPK2-203ENST00000428878 KIF15Q9NS87 1388 aa15.25■□□□□ 0.03
HIPK2-203ENST00000428878 DISP1Q96F81 1524 aa15.25■□□□□ 0.03
HIPK2-203ENST00000428878 KIAA0556O60303 1618 aa15.24■□□□□ 0.03
HIPK2-203ENST00000428878 ARHGAP5Q13017 1502 aa15.23■□□□□ 0.03
HIPK2-203ENST00000428878 ATP10BO94823 1461 aa15.22■□□□□ 0.03
HIPK2-203ENST00000428878 STK26Q9P289 416 aa15.22■□□□□ 0.03
HIPK2-203ENST00000428878 HECW1Q76N89 1606 aa15.21■□□□□ 0.03
HIPK2-203ENST00000428878 WASHC2CQ9Y4E1 1318 aa15.21■□□□□ 0.02
HIPK2-203ENST00000428878 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
HIPK2-203ENST00000428878 SCAPERQ9BY12 1400 aa15.2■□□□□ 0.02
HIPK2-203ENST00000428878 HNRNPUQ00839 825 aaKnown RBP eCLIP15.19■□□□□ 0.024e-6■■□□□ 11.5
HIPK2-203ENST00000428878 CLSPNQ9HAW4 1339 aa15.19■□□□□ 0.02
HIPK2-203ENST00000428878 ANKRD50Q9ULJ7 1429 aa15.18■□□□□ 0.02
HIPK2-203ENST00000428878 EHBP1L1Q8N3D4 1523 aa15.18■□□□□ 0.02
HIPK2-203ENST00000428878 NAIPQ13075 1403 aa15.17■□□□□ 0.02
HIPK2-203ENST00000428878 TNNT2P45379 298 aaPredicted RBP15.17■□□□□ 0.02
HIPK2-203ENST00000428878 NEFLP07196 543 aa15.16■□□□□ 0.02
HIPK2-203ENST00000428878 MRS2Q9HD23 443 aa15.16■□□□□ 0.02
HIPK2-203ENST00000428878 MAGI3Q5TCQ9 1506 aa15.15■□□□□ 0.02
HIPK2-203ENST00000428878 ADCY10Q96PN6 1610 aa15.15■□□□□ 0.02
HIPK2-203ENST00000428878 DAPK1P53355 1430 aa15.15■□□□□ 0.02
HIPK2-203ENST00000428878 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
HIPK2-203ENST00000428878 ABCC5O15440 1437 aa15.14■□□□□ 0.01
HIPK2-203ENST00000428878 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
HIPK2-203ENST00000428878 CC2D1BQ5T0F9 858 aaKnown RBP15.13■□□□□ 0.01
HIPK2-203ENST00000428878 SUPT6HQ7KZ85 1726 aaKnown RBP15.13■□□□□ 0.01
HIPK2-203ENST00000428878 C9orf84Q5VXU9 1444 aa15.13■□□□□ 0.01
HIPK2-203ENST00000428878 NBPF8Q3BBV2 869 aa15.13■□□□□ 0.01
HIPK2-203ENST00000428878 ST20-MTHFSA0A0A6YYL1 179 aa15.11■□□□□ 0.01
HIPK2-203ENST00000428878 NUTM2FA1L443 756 aa15.1■□□□□ 0.01
HIPK2-203ENST00000428878 GPATCH8Q9UKJ3 1502 aaKnown RBP15.1■□□□□ 0.01
HIPK2-203ENST00000428878 CAMSAP2Q08AD1 1489 aa15.1■□□□□ 0.01
HIPK2-203ENST00000428878 RAPGEF6Q8TEU7 1601 aa15.1■□□□□ 0.01
HIPK2-203ENST00000428878 PTPN23Q9H3S7 1636 aa15.1■□□□□ 0.01
HIPK2-203ENST00000428878 RSPH4AQ5TD94 716 aa15.09■□□□□ 0.01
HIPK2-203ENST00000428878 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.09■□□□□ 0.01
HIPK2-203ENST00000428878 KANK1Q14678 1352 aa15.09■□□□□ 0.01
HIPK2-203ENST00000428878 HFM1A2PYH4 1435 aa15.09■□□□□ 0.01
HIPK2-203ENST00000428878 NBPF1Q3BBV0 1214 aa15.09■□□□□ 0.01
HIPK2-203ENST00000428878 MAPKBP1O60336 1514 aa15.08■□□□□ 0
HIPK2-203ENST00000428878 TRAK1Q9UPV9 953 aa15.08■□□□□ 0
HIPK2-203ENST00000428878 ROCK2O75116 1388 aaKnown RBP15.06■□□□□ 0
HIPK2-203ENST00000428878 DIP2BQ9P265 1576 aa15.06■□□□□ 0
HIPK2-203ENST00000428878 MIA2Q96PC5 1412 aa15.06■□□□□ 0
HIPK2-203ENST00000428878 TMEM132EQ6IEE7 984 aa15.05■□□□□ 0
HIPK2-203ENST00000428878 SCAF1Q9H7N4 1312 aaKnown RBP15.05■□□□□ 0
HIPK2-203ENST00000428878 SOX12O15370 315 aa15.03■□□□□ -0
HIPK2-203ENST00000428878 CCDC144AA2RUR9 1427 aa15.03■□□□□ -0
HIPK2-203ENST00000428878 ABCA8O94911 1581 aa15.03■□□□□ -0
HIPK2-203ENST00000428878 BCL11AQ9H165 835 aa15.02■□□□□ -0
HIPK2-203ENST00000428878 CD109Q6YHK3 1445 aa15.02■□□□□ -0
HIPK2-203ENST00000428878 NCOA1Q15788 1441 aa15.02□□□□□ -0.01
HIPK2-203ENST00000428878 ASXL2Q76L83 1435 aa15.02□□□□□ -0.01
HIPK2-203ENST00000428878 PPM1GO15355 546 aaPredicted RBP15.01□□□□□ -0.01
HIPK2-203ENST00000428878 KIF14Q15058 1648 aa15.01□□□□□ -0.01
HIPK2-203ENST00000428878 POGKQ9P215 609 aa15.01□□□□□ -0.01
HIPK2-203ENST00000428878 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
HIPK2-203ENST00000428878 PLEKHH2Q8IVE3 1493 aa14.99□□□□□ -0.01
HIPK2-203ENST00000428878 ZBTB7CA1YPR0 619 aa14.99□□□□□ -0.01
HIPK2-203ENST00000428878 TRAPPC8Q9Y2L5 1435 aa14.98□□□□□ -0.01
HIPK2-203ENST00000428878 TCOF1Q13428 1488 aaKnown RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms