RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 KDM6BO15054 1643 aa24.06■■□□□ 1.44
PHF1-203ENST00000427004 CCNB3Q8WWL7 1395 aa24.05■■□□□ 1.44
PHF1-203ENST00000427004 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
PHF1-203ENST00000427004 TEX14Q8IWB6 1497 aa24.04■■□□□ 1.44
PHF1-203ENST00000427004 PHLDB1Q86UU1 1377 aa24.03■■□□□ 1.44
PHF1-203ENST00000427004 SAMD9LQ8IVG5 1584 aa24.02■■□□□ 1.44
PHF1-203ENST00000427004 ZNF644Q9H582 1327 aaPredicted RBP24.02■■□□□ 1.44
PHF1-203ENST00000427004 ITSN2Q9NZM3 1697 aa24.01■■□□□ 1.43
PHF1-203ENST00000427004 AKNAQ7Z591 1439 aa24.01■■□□□ 1.43
PHF1-203ENST00000427004 ARHGEF12Q9NZN5 1544 aa23.98■■□□□ 1.43
PHF1-203ENST00000427004 FRMPD1Q5SYB0 1578 aa23.98■■□□□ 1.43
PHF1-203ENST00000427004 RAPGEF3O95398 923 aa23.97■■□□□ 1.43
PHF1-203ENST00000427004 CFAP74Q9C0B2 1584 aa23.96■■□□□ 1.43
PHF1-203ENST00000427004 NEO1Q92859 1461 aa23.96■■□□□ 1.43
PHF1-203ENST00000427004 ADGRL1O94910 1474 aa23.95■■□□□ 1.42
PHF1-203ENST00000427004 EFCAB2Q5VUJ9 269 aa23.95■■□□□ 1.42
PHF1-203ENST00000427004 CFDP1Q9UEE9 299 aaPredicted RBP23.95■■□□□ 1.42
PHF1-203ENST00000427004 ARAP3Q8WWN8 1544 aa23.94■■□□□ 1.42
PHF1-203ENST00000427004 SCAPERQ9BY12 1400 aa23.93■■□□□ 1.42
PHF1-203ENST00000427004 RICTORQ6R327 1708 aa23.93■■□□□ 1.42
PHF1-203ENST00000427004 ABCC1P33527 1531 aa23.93■■□□□ 1.42
PHF1-203ENST00000427004 SYCP2Q9BX26 1530 aa23.93■■□□□ 1.42
PHF1-203ENST00000427004 MYOM3Q5VTT5 1437 aa23.92■■□□□ 1.42
PHF1-203ENST00000427004 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.42
PHF1-203ENST00000427004 CAMSAP2Q08AD1 1489 aa23.9■■□□□ 1.42
PHF1-203ENST00000427004 TRAPPC8Q9Y2L5 1435 aa23.9■■□□□ 1.42
PHF1-203ENST00000427004 DENND4BO75064 1496 aaPredicted RBP23.87■■□□□ 1.41
PHF1-203ENST00000427004 PTPN23Q9H3S7 1636 aa23.86■■□□□ 1.41
PHF1-203ENST00000427004 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
PHF1-203ENST00000427004 FGD6Q6ZV73 1430 aa23.84■■□□□ 1.41
PHF1-203ENST00000427004 POGZQ7Z3K3 1410 aa23.83■■□□□ 1.4
PHF1-203ENST00000427004 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
PHF1-203ENST00000427004 MBD5Q9P267 1494 aa23.78■■□□□ 1.4
PHF1-203ENST00000427004 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
PHF1-203ENST00000427004 SIGLEC1Q9BZZ2 1709 aa23.76■■□□□ 1.39
PHF1-203ENST00000427004 KDM4FA0A1W2PPD8 638 aa23.76■■□□□ 1.39
PHF1-203ENST00000427004 MIA2Q96PC5 1412 aa23.76■■□□□ 1.39
PHF1-203ENST00000427004 KDM5CP41229 1560 aa23.75■■□□□ 1.39
PHF1-203ENST00000427004 KIDINS220Q9ULH0 1771 aa23.74■■□□□ 1.39
PHF1-203ENST00000427004 TCOF1Q13428 1488 aaKnown RBP23.74■■□□□ 1.39
PHF1-203ENST00000427004 MYT1LQ9UL68 1186 aa23.73■■□□□ 1.39
PHF1-203ENST00000427004 ZNF518AQ6AHZ1 1483 aa23.73■■□□□ 1.39
PHF1-203ENST00000427004 ZMYM4Q5VZL5 1548 aa23.73■■□□□ 1.39
PHF1-203ENST00000427004 ABCA6Q8N139 1617 aa23.73■■□□□ 1.39
PHF1-203ENST00000427004 HECW2Q9P2P5 1572 aa23.72■■□□□ 1.39
PHF1-203ENST00000427004 PLEKHH2Q8IVE3 1493 aa23.71■■□□□ 1.39
PHF1-203ENST00000427004 KIAA1107Q9UPP5 1409 aa23.71■■□□□ 1.39
PHF1-203ENST00000427004 CROCC2H7BZ55 1655 aa23.7■■□□□ 1.38
PHF1-203ENST00000427004 ZFYVE16Q7Z3T8 1539 aa23.69■■□□□ 1.38
PHF1-203ENST00000427004 ARHGEF5Q12774 1597 aa23.69■■□□□ 1.38
PHF1-203ENST00000427004 ARHGEF40Q8TER5 1519 aa23.69■■□□□ 1.38
PHF1-203ENST00000427004 CCDC141Q6ZP82 1450 aa23.68■■□□□ 1.38
PHF1-203ENST00000427004 ITGAEP38570 1179 aa23.68■■□□□ 1.38
PHF1-203ENST00000427004 DNMT1P26358 1616 aaKnown RBP23.68■■□□□ 1.38
PHF1-203ENST00000427004 INO80Q9ULG1 1556 aaPredicted RBP23.68■■□□□ 1.38
PHF1-203ENST00000427004 DIP2CQ9Y2E4 1556 aa23.67■■□□□ 1.38
PHF1-203ENST00000427004 ABCC5O15440 1437 aa23.67■■□□□ 1.38
PHF1-203ENST00000427004 ATP7AQ04656 1500 aa23.66■■□□□ 1.38
PHF1-203ENST00000427004 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
PHF1-203ENST00000427004 DAPK1P53355 1430 aa23.65■■□□□ 1.38
PHF1-203ENST00000427004 SPAG9O60271 1321 aaKnown RBP23.64■■□□□ 1.38
PHF1-203ENST00000427004 PTPRKQ15262 1439 aa23.64■■□□□ 1.37
PHF1-203ENST00000427004 ADGBQ8N7X0 1667 aa23.64■■□□□ 1.37
PHF1-203ENST00000427004 RRBP1Q9P2E9 1410 aaKnown RBP23.62■■□□□ 1.37
PHF1-203ENST00000427004 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
PHF1-203ENST00000427004 C9orf84Q5VXU9 1444 aa23.59■■□□□ 1.37
PHF1-203ENST00000427004 MAST1Q9Y2H9 1570 aa23.56■■□□□ 1.36
PHF1-203ENST00000427004 ATP10AO60312 1499 aa23.55■■□□□ 1.36
PHF1-203ENST00000427004 MAGI2Q86UL8 1455 aa23.55■■□□□ 1.36
PHF1-203ENST00000427004 MLECQ14165 292 aa23.53■■□□□ 1.36
PHF1-203ENST00000427004 TSPY4P0CV99 314 aa23.52■■□□□ 1.36
PHF1-203ENST00000427004 TSPY10P0CW01 314 aa23.52■■□□□ 1.36
PHF1-203ENST00000427004 ARID4BQ4LE39 1312 aaPredicted RBP23.52■■□□□ 1.36
PHF1-203ENST00000427004 RRP7BPQ9NSQ0 103 aa23.51■■□□□ 1.35
PHF1-203ENST00000427004 SHANK2Q9UPX8 1470 aa23.49■■□□□ 1.35
PHF1-203ENST00000427004 RTEL1-TNFRSF6BF6WH68 1400 aa23.49■■□□□ 1.35
PHF1-203ENST00000427004 A2MP01023 1474 aa23.48■■□□□ 1.35
PHF1-203ENST00000427004 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
PHF1-203ENST00000427004 RSPH4AQ5TD94 716 aa23.47■■□□□ 1.35
PHF1-203ENST00000427004 BCORL1Q5H9F3 1711 aa23.45■■□□□ 1.34
PHF1-203ENST00000427004 KIF15Q9NS87 1388 aa23.43■■□□□ 1.34
PHF1-203ENST00000427004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.42■■□□□ 1.347e-7■■■■■ 38.4
PHF1-203ENST00000427004 REREQ9P2R6 1566 aa23.42■■□□□ 1.34
PHF1-203ENST00000427004 NCOA1Q15788 1441 aa23.42■■□□□ 1.34
PHF1-203ENST00000427004 ADGRL2O95490 1459 aa23.41■■□□□ 1.34
PHF1-203ENST00000427004 MADDQ8WXG6 1647 aa23.41■■□□□ 1.34
PHF1-203ENST00000427004 DHX29Q7Z478 1369 aaKnown RBP23.4■■□□□ 1.34
PHF1-203ENST00000427004 PLPPR3Q6T4P5 718 aa23.38■■□□□ 1.33
PHF1-203ENST00000427004 ANKRD30AQ9BXX3 1397 aa23.38■■□□□ 1.33
PHF1-203ENST00000427004 ADAMTSL3P82987 1691 aa23.38■■□□□ 1.33
PHF1-203ENST00000427004 RIMS1Q86UR5 1692 aaKnown RBP23.38■■□□□ 1.33
PHF1-203ENST00000427004 DUOX2Q9NRD8 1548 aa23.37■■□□□ 1.33
PHF1-203ENST00000427004 FER1L4A9Z1Z3 1794 aa23.37■■□□□ 1.33
PHF1-203ENST00000427004 KIF3BO15066 747 aa23.36■■□□□ 1.33
PHF1-203ENST00000427004 AGLP35573 1532 aa23.35■■□□□ 1.33
PHF1-203ENST00000427004 GGT6Q6P531 493 aa23.35■■□□□ 1.33
PHF1-203ENST00000427004 MROH1Q8NDA8 1641 aa23.33■■□□□ 1.32
PHF1-203ENST00000427004 CLTCQ00610 1675 aaKnown RBP23.32■■□□□ 1.32
PHF1-203ENST00000427004 GCC2Q8IWJ2 1684 aa23.32■■□□□ 1.32
PHF1-203ENST00000427004 CEP152O94986 1710 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms