RNA–Protein interactions for RNA: ENST00000427004.5

PHF1-203, Transcript of PHD finger protein 1, humanhuman

TSL 4

Gene PHF1, Length 609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-203ENST00000427004 NISCHQ9Y2I1 1504 aa36.91■■■■□ 3.5
PHF1-203ENST00000427004 CCDC180Q9P1Z9 1646 aa32.62■■■□□ 2.81
PHF1-203ENST00000427004 ABCC9O60706 1549 aa31.84■■■□□ 2.69
PHF1-203ENST00000427004 DCAF8L2P0C7V8 631 aa30.89■■■□□ 2.54
PHF1-203ENST00000427004 ZCCHC6Q5VYS8 1495 aaKnown RBP30.82■■■□□ 2.53
PHF1-203ENST00000427004 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
PHF1-203ENST00000427004 NACADO15069 1562 aa30.54■■■□□ 2.48
PHF1-203ENST00000427004 DCAF1Q9Y4B6 1507 aa30.37■■■□□ 2.45
PHF1-203ENST00000427004 MYO15BQ96JP2 1530 aa30.31■■■□□ 2.44
PHF1-203ENST00000427004 UNC13AQ9UPW8 1703 aa30.14■■■□□ 2.42
PHF1-203ENST00000427004 SCRIBQ14160 1630 aa30.04■■■□□ 2.4
PHF1-203ENST00000427004 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
PHF1-203ENST00000427004 BICRAQ9NZM4 1560 aa29.78■■■□□ 2.36
PHF1-203ENST00000427004 SHROOM4Q9ULL8 1493 aa29.68■■■□□ 2.34
PHF1-203ENST00000427004 DNAJC5BQ9UF47 199 aa29.54■■■□□ 2.32
PHF1-203ENST00000427004 EIF4G1Q04637 1599 aaKnown RBP28.9■■■□□ 2.22
PHF1-203ENST00000427004 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
PHF1-203ENST00000427004 CC2D2AQ9P2K1 1620 aa28.76■■■□□ 2.19
PHF1-203ENST00000427004 SMARCA4P51532 1647 aa28.64■■■□□ 2.18
PHF1-203ENST00000427004 MROH2BQ7Z745 1585 aa28.58■■■□□ 2.17
PHF1-203ENST00000427004 BAZ1AQ9NRL2 1556 aaPredicted RBP28.53■■■□□ 2.16
PHF1-203ENST00000427004 WIZO95785 1651 aa28.36■■■□□ 2.13
PHF1-203ENST00000427004 ATAD2BQ9ULI0 1458 aa28.34■■■□□ 2.13
PHF1-203ENST00000427004 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
PHF1-203ENST00000427004 SMARCA2P51531 1590 aa28.24■■■□□ 2.11
PHF1-203ENST00000427004 PEG3Q9GZU2 1588 aa28.2■■■□□ 2.11
PHF1-203ENST00000427004 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
PHF1-203ENST00000427004 BAZ1BQ9UIG0 1483 aaKnown RBP28.13■■■□□ 2.09
PHF1-203ENST00000427004 HMGXB3Q12766 1538 aa28.09■■■□□ 2.09
PHF1-203ENST00000427004 SUPT5HO00267 1087 aaKnown RBP27.98■■■□□ 2.07
PHF1-203ENST00000427004 TOP2AP11388 1531 aaKnown RBP27.9■■■□□ 2.06
PHF1-203ENST00000427004 NESP48681 1621 aa27.7■■■□□ 2.02
PHF1-203ENST00000427004 CCDC88BA6NC98 1476 aa27.64■■■□□ 2.01
PHF1-203ENST00000427004 LAMC3Q9Y6N6 1575 aa27.41■■□□□ 1.98
PHF1-203ENST00000427004 CADPSQ9ULU8 1353 aa27.41■■□□□ 1.98
PHF1-203ENST00000427004 KIF21AQ7Z4S6 1674 aa27.38■■□□□ 1.97
PHF1-203ENST00000427004 CFTRP13569 1480 aa27.32■■□□□ 1.96
PHF1-203ENST00000427004 ERCC6Q03468 1493 aa27.29■■□□□ 1.96
PHF1-203ENST00000427004 PRDM2Q13029 1718 aa27.25■■□□□ 1.95
PHF1-203ENST00000427004 FANCD2Q9BXW9 1451 aa27.18■■□□□ 1.94
PHF1-203ENST00000427004 PDS5BQ9NTI5 1447 aa27.16■■□□□ 1.94
PHF1-203ENST00000427004 DNAJC5Q9H3Z4 198 aa27.13■■□□□ 1.93
PHF1-203ENST00000427004 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
PHF1-203ENST00000427004 CEP164Q9UPV0 1460 aa27.07■■□□□ 1.92
PHF1-203ENST00000427004 CUX2O14529 1486 aa26.99■■□□□ 1.91
PHF1-203ENST00000427004 MRC2Q9UBG0 1479 aa26.97■■□□□ 1.91
PHF1-203ENST00000427004 URB2Q14146 1524 aaKnown RBP26.96■■□□□ 1.91
PHF1-203ENST00000427004 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
PHF1-203ENST00000427004 WDR62O43379 1518 aa26.87■■□□□ 1.89
PHF1-203ENST00000427004 TOPBP1Q92547 1522 aa26.8■■□□□ 1.88
PHF1-203ENST00000427004 CUX1P39880 1505 aa26.78■■□□□ 1.88
PHF1-203ENST00000427004 DNMBPQ6XZF7 1577 aa26.76■■□□□ 1.87
PHF1-203ENST00000427004 SYNJ1O43426 1573 aa26.7■■□□□ 1.86
PHF1-203ENST00000427004 WRNQ14191 1432 aaPredicted RBP eCLIP26.63■■□□□ 1.85
PHF1-203ENST00000427004 FGD5Q6ZNL6 1462 aa26.62■■□□□ 1.85
PHF1-203ENST00000427004 POLA1P09884 1462 aaPredicted RBP26.6■■□□□ 1.85
PHF1-203ENST00000427004 RAD54L2Q9Y4B4 1467 aa26.59■■□□□ 1.85
PHF1-203ENST00000427004 BIVM-ERCC5R4GMW8 1640 aa26.57■■□□□ 1.84
PHF1-203ENST00000427004 TOP2BQ02880 1626 aa26.55■■□□□ 1.84
PHF1-203ENST00000427004 TARBP1Q13395 1621 aaKnown RBP26.5■■□□□ 1.83
PHF1-203ENST00000427004 ZNF608Q9ULD9 1512 aaPredicted RBP26.5■■□□□ 1.83
PHF1-203ENST00000427004 SOGA1O94964 1423 aa26.45■■□□□ 1.82
PHF1-203ENST00000427004 IFT140Q96RY7 1462 aa26.44■■□□□ 1.82
PHF1-203ENST00000427004 WDR97A6NE52 1622 aa26.41■■□□□ 1.82
PHF1-203ENST00000427004 EIF4G3O43432 1585 aaKnown RBP26.37■■□□□ 1.81
PHF1-203ENST00000427004 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.814e-6■■□□□ 14
PHF1-203ENST00000427004 TDRD9Q8NDG6 1382 aaKnown RBP26.36■■□□□ 1.81
PHF1-203ENST00000427004 ABCA10Q8WWZ4 1543 aa26.26■■□□□ 1.79
PHF1-203ENST00000427004 TRIM41Q8WV44 630 aa26.24■■□□□ 1.79
PHF1-203ENST00000427004 CHIC1Q5VXU3 224 aa26.22■■□□□ 1.79
PHF1-203ENST00000427004 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
PHF1-203ENST00000427004 PBRM1Q86U86 1689 aa26.21■■□□□ 1.79
PHF1-203ENST00000427004 GAPVD1Q14C86 1478 aa26.15■■□□□ 1.78
PHF1-203ENST00000427004 RUSC2Q8N2Y8 1516 aa26.14■■□□□ 1.78
PHF1-203ENST00000427004 SNAPC4Q5SXM2 1469 aa26.1■■□□□ 1.77
PHF1-203ENST00000427004 CHD1O14646 1710 aa26.06■■□□□ 1.76
PHF1-203ENST00000427004 GRIN2BQ13224 1484 aa26.05■■□□□ 1.76
PHF1-203ENST00000427004 FBLN2P98095 1184 aa25.99■■□□□ 1.75
PHF1-203ENST00000427004 KIF27Q86VH2 1401 aa25.97■■□□□ 1.75
PHF1-203ENST00000427004 ADAMTS12P58397 1594 aa25.95■■□□□ 1.74
PHF1-203ENST00000427004 FAM9AQ8IZU1 332 aaPredicted RBP25.94■■□□□ 1.74
PHF1-203ENST00000427004 MAGI1Q96QZ7 1491 aaPredicted RBP25.91■■□□□ 1.74
PHF1-203ENST00000427004 ERICH3Q5RHP9 1530 aa25.91■■□□□ 1.74
PHF1-203ENST00000427004 IGF1RP08069 1367 aa25.9■■□□□ 1.74
PHF1-203ENST00000427004 SYNJ2O15056 1496 aa25.85■■□□□ 1.73
PHF1-203ENST00000427004 CHMP7Q8WUX9 453 aaPredicted RBP25.84■■□□□ 1.73
PHF1-203ENST00000427004 OSCARQ8IYS5 282 aa25.8■■□□□ 1.72
PHF1-203ENST00000427004 FHAD1B1AJZ9 1412 aa25.8■■□□□ 1.72
PHF1-203ENST00000427004 CUL7Q14999 1698 aa25.78■■□□□ 1.72
PHF1-203ENST00000427004 GRIN2AQ12879 1464 aa25.77■■□□□ 1.72
PHF1-203ENST00000427004 CEP170Q5SW79 1584 aa25.74■■□□□ 1.71
PHF1-203ENST00000427004 CARMIL1Q5VZK9 1371 aa25.74■■□□□ 1.71
PHF1-203ENST00000427004 EHMT2Q96KQ7 1210 aa25.74■■□□□ 1.71
PHF1-203ENST00000427004 CSRNP3Q8WYN3 585 aa25.66■■□□□ 1.7
PHF1-203ENST00000427004 CLASP1Q7Z460 1538 aa25.64■■□□□ 1.7
PHF1-203ENST00000427004 NUP160Q12769 1436 aa25.61■■□□□ 1.69
PHF1-203ENST00000427004 PRXQ9BXM0 1461 aa25.6■■□□□ 1.69
PHF1-203ENST00000427004 RAPGEF2Q9Y4G8 1499 aa25.6■■□□□ 1.69
PHF1-203ENST00000427004 EEA1Q15075 1411 aa25.57■■□□□ 1.68
PHF1-203ENST00000427004 ERCC6L2Q5T890 1561 aa25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms