RNA–Protein interactions for RNA: ENST00000419431.2

LINC00308-201, long intergenic non-protein coding RNA 308, humanhuman

TSL 5 BASIC

Gene LINC00308, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00308-201ENST00000419431 C3P01024 1663 aa11.49□□□□□ -0.57
LINC00308-201ENST00000419431 CAMSAP1Q5T5Y3 1602 aa11.47□□□□□ -0.57
LINC00308-201ENST00000419431 FHOD3Q2V2M9 1422 aa11.47□□□□□ -0.57
LINC00308-201ENST00000419431 PIP4K2BP78356 416 aa11.47□□□□□ -0.57
LINC00308-201ENST00000419431 DENND4BO75064 1496 aaPredicted RBP11.46□□□□□ -0.57
LINC00308-201ENST00000419431 SETD1BQ9UPS6 1966 aaKnown RBP11.46□□□□□ -0.58
LINC00308-201ENST00000419431 HECW1Q76N89 1606 aa11.45□□□□□ -0.58
LINC00308-201ENST00000419431 CFAP74Q9C0B2 1584 aa11.4□□□□□ -0.58
LINC00308-201ENST00000419431 CARMIL1Q5VZK9 1371 aa11.4□□□□□ -0.59
LINC00308-201ENST00000419431 ARID3CA6NKF2 412 aa11.39□□□□□ -0.59
LINC00308-201ENST00000419431 POTEAQ6S8J7 498 aa11.39□□□□□ -0.59
LINC00308-201ENST00000419431 C9orf84Q5VXU9 1444 aa11.38□□□□□ -0.59
LINC00308-201ENST00000419431 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
LINC00308-201ENST00000419431 ATP10BO94823 1461 aa11.37□□□□□ -0.59
LINC00308-201ENST00000419431 MAGI2Q86UL8 1455 aa11.37□□□□□ -0.59
LINC00308-201ENST00000419431 ZNF142P52746 1687 aaPredicted RBP11.36□□□□□ -0.59
LINC00308-201ENST00000419431 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
LINC00308-201ENST00000419431 NCKAP5LQ9HCH0 1330 aa11.35□□□□□ -0.59
LINC00308-201ENST00000419431 TCOF1Q13428 1488 aaKnown RBP11.34□□□□□ -0.59
LINC00308-201ENST00000419431 SUPT6HQ7KZ85 1726 aaKnown RBP11.34□□□□□ -0.59
LINC00308-201ENST00000419431 CPS1P31327 1500 aa11.33□□□□□ -0.6
LINC00308-201ENST00000419431 CTTNBP2Q8WZ74 1663 aa11.33□□□□□ -0.6
LINC00308-201ENST00000419431 ATP10AO60312 1499 aa11.32□□□□□ -0.6
LINC00308-201ENST00000419431 TRAPPC8Q9Y2L5 1435 aa11.32□□□□□ -0.6
LINC00308-201ENST00000419431 PLA2R1Q13018 1463 aa11.32□□□□□ -0.6
LINC00308-201ENST00000419431 TOM1O60784 492 aa11.3□□□□□ -0.6
LINC00308-201ENST00000419431 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
LINC00308-201ENST00000419431 CEP170BQ9Y4F5 1589 aaPredicted RBP11.28□□□□□ -0.6
LINC00308-201ENST00000419431 RNF17Q9BXT8 1623 aaKnown RBP11.28□□□□□ -0.6
LINC00308-201ENST00000419431 RAPGEF2Q9Y4G8 1499 aa11.28□□□□□ -0.6
LINC00308-201ENST00000419431 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
LINC00308-201ENST00000419431 NEURL4Q96JN8 1562 aa11.28□□□□□ -0.6
LINC00308-201ENST00000419431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.27□□□□□ -0.61
LINC00308-201ENST00000419431 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
LINC00308-201ENST00000419431 VWDEQ8N2E2 1590 aa11.26□□□□□ -0.61
LINC00308-201ENST00000419431 ABCA6Q8N139 1617 aa11.26□□□□□ -0.61
LINC00308-201ENST00000419431 PTPRKQ15262 1439 aa11.26□□□□□ -0.61
LINC00308-201ENST00000419431 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
LINC00308-201ENST00000419431 SHANK2Q9UPX8 1470 aa11.25□□□□□ -0.61
LINC00308-201ENST00000419431 REREQ9P2R6 1566 aa11.24□□□□□ -0.61
LINC00308-201ENST00000419431 PPP6R1Q9UPN7 881 aa11.24□□□□□ -0.61
LINC00308-201ENST00000419431 MROH2AA6NES4 1674 aa11.24□□□□□ -0.61
LINC00308-201ENST00000419431 RAPGEF6Q8TEU7 1601 aa11.23□□□□□ -0.61
LINC00308-201ENST00000419431 STRCP1A6NGW2 1772 aa11.23□□□□□ -0.61
LINC00308-201ENST00000419431 KDM5CP41229 1560 aa11.22□□□□□ -0.61
LINC00308-201ENST00000419431 NPATQ14207 1427 aa11.22□□□□□ -0.61
LINC00308-201ENST00000419431 AGLP35573 1532 aa11.21□□□□□ -0.61
LINC00308-201ENST00000419431 LRRC7Q96NW7 1537 aa11.21□□□□□ -0.61
LINC00308-201ENST00000419431 SCAPERQ9BY12 1400 aa11.21□□□□□ -0.61
LINC00308-201ENST00000419431 PKD2Q13563 968 aa11.2□□□□□ -0.62
LINC00308-201ENST00000419431 SYNMO15061 1565 aa11.19□□□□□ -0.62
LINC00308-201ENST00000419431 SETBP1Q9Y6X0 1596 aa11.19□□□□□ -0.62
LINC00308-201ENST00000419431 NUP153P49790 1475 aaKnown RBP11.19□□□□□ -0.62
LINC00308-201ENST00000419431 DNMT1P26358 1616 aaKnown RBP11.15□□□□□ -0.62
LINC00308-201ENST00000419431 CNTLNQ9NXG0 1405 aa11.15□□□□□ -0.62
LINC00308-201ENST00000419431 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
LINC00308-201ENST00000419431 ZNF518AQ6AHZ1 1483 aa11.13□□□□□ -0.63
LINC00308-201ENST00000419431 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
LINC00308-201ENST00000419431 TRIM52Q96A61 297 aa11.11□□□□□ -0.63
LINC00308-201ENST00000419431 MYO5CQ9NQX4 1742 aa11.1□□□□□ -0.63
LINC00308-201ENST00000419431 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
LINC00308-201ENST00000419431 A2ML1A8K2U0 1454 aa11.09□□□□□ -0.63
LINC00308-201ENST00000419431 LRP6O75581 1613 aa11.09□□□□□ -0.63
LINC00308-201ENST00000419431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.08□□□□□ -0.64
LINC00308-201ENST00000419431 HNRNPUL2Q1KMD3 747 aaKnown RBP11.08□□□□□ -0.64
LINC00308-201ENST00000419431 IQGAP1P46940 1657 aa11.08□□□□□ -0.64
LINC00308-201ENST00000419431 ROBO1Q9Y6N7 1651 aa11.08□□□□□ -0.64
LINC00308-201ENST00000419431 ESF1Q9H501 851 aaKnown RBP11.07□□□□□ -0.64
LINC00308-201ENST00000419431 PLCH2O75038 1416 aa11.07□□□□□ -0.64
LINC00308-201ENST00000419431 ITSN2Q9NZM3 1697 aa11.07□□□□□ -0.64
LINC00308-201ENST00000419431 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
LINC00308-201ENST00000419431 KIDINS220Q9ULH0 1771 aa11.06□□□□□ -0.64
LINC00308-201ENST00000419431 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
LINC00308-201ENST00000419431 CDK13Q14004 1512 aaKnown RBP11.05□□□□□ -0.64
LINC00308-201ENST00000419431 P3H3Q8IVL6 736 aa11.05□□□□□ -0.64
LINC00308-201ENST00000419431 MLH3Q9UHC1 1453 aa11.04□□□□□ -0.64
LINC00308-201ENST00000419431 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
LINC00308-201ENST00000419431 LRP5O75197 1615 aa11.02□□□□□ -0.64
LINC00308-201ENST00000419431 CDK12Q9NYV4 1490 aaPredicted RBP11.02□□□□□ -0.65
LINC00308-201ENST00000419431 AFAP1Q8N556 730 aa11.02□□□□□ -0.65
LINC00308-201ENST00000419431 KIF14Q15058 1648 aa11.02□□□□□ -0.65
LINC00308-201ENST00000419431 ZC3H13Q5T200 1668 aaKnown RBP11.01□□□□□ -0.65
LINC00308-201ENST00000419431 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
LINC00308-201ENST00000419431 ABCC1P33527 1531 aa11.01□□□□□ -0.65
LINC00308-201ENST00000419431 RGS12O14924 1447 aa11.01□□□□□ -0.65
LINC00308-201ENST00000419431 MED14O60244 1454 aa11□□□□□ -0.65
LINC00308-201ENST00000419431 PHLPP1O60346 1717 aa11□□□□□ -0.65
LINC00308-201ENST00000419431 FAM135BQ49AJ0 1406 aa11□□□□□ -0.65
LINC00308-201ENST00000419431 ARHGAP5Q13017 1502 aa10.99□□□□□ -0.65
LINC00308-201ENST00000419431 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
LINC00308-201ENST00000419431 PLXNC1O60486 1568 aa10.98□□□□□ -0.65
LINC00308-201ENST00000419431 RBM33Q96EV2 1170 aaKnown RBP10.97□□□□□ -0.65
LINC00308-201ENST00000419431 EP400Q96L91 3159 aa10.97□□□□□ -0.65
LINC00308-201ENST00000419431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.65
LINC00308-201ENST00000419431 PLEKHD1A6NEE1 506 aa10.96□□□□□ -0.65
LINC00308-201ENST00000419431 MYT1LQ9UL68 1186 aa10.96□□□□□ -0.65
LINC00308-201ENST00000419431 CDC42BPBQ9Y5S2 1711 aa10.94□□□□□ -0.66
LINC00308-201ENST00000419431 MAP3K1Q13233 1512 aa10.94□□□□□ -0.66
LINC00308-201ENST00000419431 ZRANB1Q9UGI0 708 aa10.93□□□□□ -0.66
LINC00308-201ENST00000419431 JCADQ9P266 1359 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms