RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 FANCAO15360 1455 aa10.74□□□□□ -0.69
NCL-203ENST00000417652 NEO1Q92859 1461 aa10.74□□□□□ -0.69
NCL-203ENST00000417652 TTC37Q6PGP7 1564 aa10.74□□□□□ -0.69
NCL-203ENST00000417652 CFDP1Q9UEE9 299 aaPredicted RBP10.74□□□□□ -0.69
NCL-203ENST00000417652 AKNAQ7Z591 1439 aa10.74□□□□□ -0.69
NCL-203ENST00000417652 ARHGAP5Q13017 1502 aa10.74□□□□□ -0.69
NCL-203ENST00000417652 MYO5CQ9NQX4 1742 aa10.72□□□□□ -0.69
NCL-203ENST00000417652 COL17A1Q9UMD9 1497 aaPredicted RBP10.72□□□□□ -0.69
NCL-203ENST00000417652 CFAP74Q9C0B2 1584 aa10.72□□□□□ -0.69
NCL-203ENST00000417652 DENND4BO75064 1496 aaPredicted RBP10.71□□□□□ -0.69
NCL-203ENST00000417652 ARAP3Q8WWN8 1544 aa10.71□□□□□ -0.69
NCL-203ENST00000417652 SCAPERQ9BY12 1400 aa10.7□□□□□ -0.7
NCL-203ENST00000417652 TIAM1Q13009 1591 aa10.69□□□□□ -0.7
NCL-203ENST00000417652 EHBP1L1Q8N3D4 1523 aa10.69□□□□□ -0.7
NCL-203ENST00000417652 ADGRL1O94910 1474 aa10.69□□□□□ -0.7
NCL-203ENST00000417652 ARID4BQ4LE39 1312 aaPredicted RBP10.69□□□□□ -0.7
NCL-203ENST00000417652 KANK4Q5T7N3 995 aaPredicted RBP10.69□□□□□ -0.7
NCL-203ENST00000417652 HNRNPMP52272 730 aaKnown RBP eCLIP10.67□□□□□ -0.7
NCL-203ENST00000417652 AFAP1Q8N556 730 aa10.67□□□□□ -0.7
NCL-203ENST00000417652 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
NCL-203ENST00000417652 SUPT6HQ7KZ85 1726 aaKnown RBP10.67□□□□□ -0.7
NCL-203ENST00000417652 MAP3K1Q13233 1512 aa10.66□□□□□ -0.7
NCL-203ENST00000417652 GPATCH8Q9UKJ3 1502 aaKnown RBP10.66□□□□□ -0.7
NCL-203ENST00000417652 CDC42BPAQ5VT25 1732 aa10.65□□□□□ -0.7
NCL-203ENST00000417652 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
NCL-203ENST00000417652 NCOA2Q15596 1464 aa10.65□□□□□ -0.7
NCL-203ENST00000417652 PREX2Q70Z35 1606 aa10.65□□□□□ -0.7
NCL-203ENST00000417652 PPARGC1BQ86YN6 1023 aaKnown RBP10.64□□□□□ -0.71
NCL-203ENST00000417652 PLEKHH2Q8IVE3 1493 aa10.62□□□□□ -0.71
NCL-203ENST00000417652 SPAG9O60271 1321 aaKnown RBP10.62□□□□□ -0.71
NCL-203ENST00000417652 ZNF644Q9H582 1327 aaPredicted RBP10.62□□□□□ -0.71
NCL-203ENST00000417652 ITSN2Q9NZM3 1697 aa10.62□□□□□ -0.71
NCL-203ENST00000417652 ZNF518AQ6AHZ1 1483 aa10.61□□□□□ -0.71
NCL-203ENST00000417652 POGZQ7Z3K3 1410 aa10.61□□□□□ -0.71
NCL-203ENST00000417652 TSPY4P0CV99 314 aa10.61□□□□□ -0.71
NCL-203ENST00000417652 TSPY10P0CW01 314 aa10.61□□□□□ -0.71
NCL-203ENST00000417652 MLECQ14165 292 aa10.6□□□□□ -0.71
NCL-203ENST00000417652 RSPH4AQ5TD94 716 aa10.6□□□□□ -0.71
NCL-203ENST00000417652 RICTORQ6R327 1708 aa10.6□□□□□ -0.71
NCL-203ENST00000417652 TRAPPC8Q9Y2L5 1435 aa10.59□□□□□ -0.71
NCL-203ENST00000417652 MAGI2Q86UL8 1455 aa10.59□□□□□ -0.71
NCL-203ENST00000417652 KIAA1107Q9UPP5 1409 aa10.58□□□□□ -0.72
NCL-203ENST00000417652 ZFYVE16Q7Z3T8 1539 aa10.58□□□□□ -0.72
NCL-203ENST00000417652 FAM50AQ14320 339 aaKnown RBP10.58□□□□□ -0.72
NCL-203ENST00000417652 ABCC1P33527 1531 aa10.58□□□□□ -0.72
NCL-203ENST00000417652 SYCP2Q9BX26 1530 aa10.58□□□□□ -0.72
NCL-203ENST00000417652 MYOM3Q5VTT5 1437 aa10.58□□□□□ -0.72
NCL-203ENST00000417652 FRMPD1Q5SYB0 1578 aa10.57□□□□□ -0.72
NCL-203ENST00000417652 SAMD9LQ8IVG5 1584 aa10.57□□□□□ -0.72
NCL-203ENST00000417652 KDM4FA0A1W2PPD8 638 aa10.57□□□□□ -0.72
NCL-203ENST00000417652 ESF1Q9H501 851 aaKnown RBP10.57□□□□□ -0.72
NCL-203ENST00000417652 ARHGEF12Q9NZN5 1544 aa10.57□□□□□ -0.72
NCL-203ENST00000417652 YEATS2Q9ULM3 1422 aa10.57□□□□□ -0.72
NCL-203ENST00000417652 ATP10AO60312 1499 aa10.56□□□□□ -0.72
NCL-203ENST00000417652 CAMSAP2Q08AD1 1489 aa10.55□□□□□ -0.72
NCL-203ENST00000417652 ZMYM4Q5VZL5 1548 aa10.55□□□□□ -0.72
NCL-203ENST00000417652 MIA2Q96PC5 1412 aa10.55□□□□□ -0.72
NCL-203ENST00000417652 HECW2Q9P2P5 1572 aa10.54□□□□□ -0.72
NCL-203ENST00000417652 MLH3Q9UHC1 1453 aa10.54□□□□□ -0.72
NCL-203ENST00000417652 ARHGEF40Q8TER5 1519 aa10.53□□□□□ -0.72
NCL-203ENST00000417652 C9orf84Q5VXU9 1444 aa10.53□□□□□ -0.72
NCL-203ENST00000417652 KDM5CP41229 1560 aa10.52□□□□□ -0.72
NCL-203ENST00000417652 CCDC141Q6ZP82 1450 aa10.52□□□□□ -0.73
NCL-203ENST00000417652 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
NCL-203ENST00000417652 ITGAEP38570 1179 aa10.51□□□□□ -0.73
NCL-203ENST00000417652 CHIC2Q9UKJ5 165 aa10.51□□□□□ -0.73
NCL-203ENST00000417652 MBD5Q9P267 1494 aa10.5□□□□□ -0.73
NCL-203ENST00000417652 ATP7AQ04656 1500 aa10.5□□□□□ -0.73
NCL-203ENST00000417652 GGT6Q6P531 493 aa10.5□□□□□ -0.73
NCL-203ENST00000417652 PTPN23Q9H3S7 1636 aa10.5□□□□□ -0.73
NCL-203ENST00000417652 KIDINS220Q9ULH0 1771 aa10.49□□□□□ -0.73
NCL-203ENST00000417652 RTEL1-TNFRSF6BF6WH68 1400 aa10.49□□□□□ -0.73
NCL-203ENST00000417652 DIP2CQ9Y2E4 1556 aa10.48□□□□□ -0.73
NCL-203ENST00000417652 KIF3BO15066 747 aa10.48□□□□□ -0.73
NCL-203ENST00000417652 RRP7BPQ9NSQ0 103 aa10.48□□□□□ -0.73
NCL-203ENST00000417652 A2MP01023 1474 aa10.48□□□□□ -0.73
NCL-203ENST00000417652 ABCA6Q8N139 1617 aa10.47□□□□□ -0.73
NCL-203ENST00000417652 ARHGEF5Q12774 1597 aa10.47□□□□□ -0.73
NCL-203ENST00000417652 BCORL1Q5H9F3 1711 aa10.47□□□□□ -0.73
NCL-203ENST00000417652 DHX29Q7Z478 1369 aaKnown RBP10.46□□□□□ -0.74
NCL-203ENST00000417652 INO80Q9ULG1 1556 aaPredicted RBP10.45□□□□□ -0.74
NCL-203ENST00000417652 ANKRD30AQ9BXX3 1397 aa10.45□□□□□ -0.74
NCL-203ENST00000417652 ADGBQ8N7X0 1667 aa10.44□□□□□ -0.74
NCL-203ENST00000417652 TCOF1Q13428 1488 aaKnown RBP10.44□□□□□ -0.74
NCL-203ENST00000417652 ABCC5O15440 1437 aa10.44□□□□□ -0.74
NCL-203ENST00000417652 DAPK1P53355 1430 aa10.44□□□□□ -0.74
NCL-203ENST00000417652 CEBPAP49715 358 aaPredicted RBP10.43□□□□□ -0.74
NCL-203ENST00000417652 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.43□□□□□ -0.744e-30■■■■■ 33.1
NCL-203ENST00000417652 ADAMTSL3P82987 1691 aa10.43□□□□□ -0.74
NCL-203ENST00000417652 MADDQ8WXG6 1647 aa10.43□□□□□ -0.74
NCL-203ENST00000417652 REREQ9P2R6 1566 aa10.43□□□□□ -0.74
NCL-203ENST00000417652 AGLP35573 1532 aa10.43□□□□□ -0.74
NCL-203ENST00000417652 PTPRMP28827 1452 aa10.42□□□□□ -0.74
NCL-203ENST00000417652 KIF15Q9NS87 1388 aa10.42□□□□□ -0.74
NCL-203ENST00000417652 WASHC2CQ9Y4E1 1318 aa10.42□□□□□ -0.74
NCL-203ENST00000417652 RIMS1Q86UR5 1692 aaKnown RBP10.42□□□□□ -0.74
NCL-203ENST00000417652 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
NCL-203ENST00000417652 SIGLEC1Q9BZZ2 1709 aa10.41□□□□□ -0.74
NCL-203ENST00000417652 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
NCL-203ENST00000417652 MAST1Q9Y2H9 1570 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms