RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
GABRE-202ENST00000417300 ABCA8O94911 1581 aa18.34■□□□□ 0.53
GABRE-202ENST00000417300 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
GABRE-202ENST00000417300 UBAP1LF5GYI3 381 aa18.32■□□□□ 0.52
GABRE-202ENST00000417300 MLECQ14165 292 aa18.31■□□□□ 0.52
GABRE-202ENST00000417300 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
GABRE-202ENST00000417300 NUP153P49790 1475 aaKnown RBP18.31■□□□□ 0.52
GABRE-202ENST00000417300 PTPRTO14522 1441 aa18.31■□□□□ 0.52
GABRE-202ENST00000417300 ATP1B4Q9UN42 357 aaPredicted RBP18.29■□□□□ 0.52
GABRE-202ENST00000417300 LTBP4Q8N2S1 1624 aa18.28■□□□□ 0.52
GABRE-202ENST00000417300 PREX1Q8TCU6 1659 aa18.28■□□□□ 0.52
GABRE-202ENST00000417300 FANCAO15360 1455 aa18.27■□□□□ 0.52
GABRE-202ENST00000417300 PHF23Q9BUL5 403 aaPredicted RBP18.27■□□□□ 0.52
GABRE-202ENST00000417300 EHBP1L1Q8N3D4 1523 aa18.27■□□□□ 0.51
GABRE-202ENST00000417300 NEO1Q92859 1461 aa18.26■□□□□ 0.51
GABRE-202ENST00000417300 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
GABRE-202ENST00000417300 ARHGEF40Q8TER5 1519 aa18.26■□□□□ 0.51
GABRE-202ENST00000417300 MED1Q15648 1581 aaPredicted RBP18.25■□□□□ 0.51
GABRE-202ENST00000417300 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
GABRE-202ENST00000417300 PCGF6Q9BYE7 350 aa18.24■□□□□ 0.51
GABRE-202ENST00000417300 AKNAQ7Z591 1439 aa18.23■□□□□ 0.51
GABRE-202ENST00000417300 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
GABRE-202ENST00000417300 CEBPAP49715 358 aaPredicted RBP18.22■□□□□ 0.51
GABRE-202ENST00000417300 UHRF1BP1Q6BDS2 1440 aa18.22■□□□□ 0.51
GABRE-202ENST00000417300 MTUS2Q5JR59 1369 aa18.21■□□□□ 0.51
GABRE-202ENST00000417300 FER1L4A9Z1Z3 1794 aa18.2■□□□□ 0.5
GABRE-202ENST00000417300 SUPT6HQ7KZ85 1726 aaKnown RBP18.2■□□□□ 0.5
GABRE-202ENST00000417300 RRBP1Q9P2E9 1410 aaKnown RBP18.17■□□□□ 0.5
GABRE-202ENST00000417300 ABCA9Q8IUA7 1624 aa18.17■□□□□ 0.5
GABRE-202ENST00000417300 ARID3CA6NKF2 412 aa18.17■□□□□ 0.5
GABRE-202ENST00000417300 DENND4BO75064 1496 aaPredicted RBP18.16■□□□□ 0.5
GABRE-202ENST00000417300 ATP10BO94823 1461 aa18.16■□□□□ 0.5
GABRE-202ENST00000417300 HSPA1LP34931 641 aa18.16■□□□□ 0.5
GABRE-202ENST00000417300 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
GABRE-202ENST00000417300 NCOA2Q15596 1464 aa18.14■□□□□ 0.49
GABRE-202ENST00000417300 CDK11AQ9UQ88 783 aaPredicted RBP18.13■□□□□ 0.49
GABRE-202ENST00000417300 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
GABRE-202ENST00000417300 SETD1BQ9UPS6 1966 aaKnown RBP18.1■□□□□ 0.49
GABRE-202ENST00000417300 SIGLEC1Q9BZZ2 1709 aa18.1■□□□□ 0.49
GABRE-202ENST00000417300 ZFYVE16Q7Z3T8 1539 aa18.09■□□□□ 0.49
GABRE-202ENST00000417300 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
GABRE-202ENST00000417300 RICTORQ6R327 1708 aa18.07■□□□□ 0.48
GABRE-202ENST00000417300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
GABRE-202ENST00000417300 PIP4K2BP78356 416 aa18.07■□□□□ 0.48
GABRE-202ENST00000417300 HNRNPUL2Q1KMD3 747 aaKnown RBP18.07■□□□□ 0.48
GABRE-202ENST00000417300 ARHGEF12Q9NZN5 1544 aa18.07■□□□□ 0.48
GABRE-202ENST00000417300 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
GABRE-202ENST00000417300 ZNF335Q9H4Z2 1342 aaPredicted RBP18.06■□□□□ 0.48
GABRE-202ENST00000417300 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
GABRE-202ENST00000417300 KIF14Q15058 1648 aa18.05■□□□□ 0.48
GABRE-202ENST00000417300 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.04■□□□□ 0.481e-9■□□□□ 8.2
GABRE-202ENST00000417300 MAGI2Q86UL8 1455 aa18.03■□□□□ 0.48
GABRE-202ENST00000417300 PLEKHD1A6NEE1 506 aa18.03■□□□□ 0.48
GABRE-202ENST00000417300 NCOA1Q15788 1441 aa18.03■□□□□ 0.48
GABRE-202ENST00000417300 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
GABRE-202ENST00000417300 ITSN2Q9NZM3 1697 aa18.01■□□□□ 0.47
GABRE-202ENST00000417300 MIA2Q96PC5 1412 aa18■□□□□ 0.47
GABRE-202ENST00000417300 TOM1O60784 492 aa18■□□□□ 0.47
GABRE-202ENST00000417300 PTPN23Q9H3S7 1636 aa17.98■□□□□ 0.47
GABRE-202ENST00000417300 TCOF1Q13428 1488 aaKnown RBP17.98■□□□□ 0.47
GABRE-202ENST00000417300 ATP10AO60312 1499 aa17.96■□□□□ 0.47
GABRE-202ENST00000417300 NCKAP5LQ9HCH0 1330 aa17.95■□□□□ 0.46
GABRE-202ENST00000417300 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
GABRE-202ENST00000417300 GPATCH8Q9UKJ3 1502 aaKnown RBP17.94■□□□□ 0.46
GABRE-202ENST00000417300 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
GABRE-202ENST00000417300 TRAPPC8Q9Y2L5 1435 aa17.93■□□□□ 0.46
GABRE-202ENST00000417300 CFAP74Q9C0B2 1584 aa17.92■□□□□ 0.46
GABRE-202ENST00000417300 ESF1Q9H501 851 aaKnown RBP17.92■□□□□ 0.46
GABRE-202ENST00000417300 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.91■□□□□ 0.465e-7■■□□□ 12.6
GABRE-202ENST00000417300 PREX2Q70Z35 1606 aa17.9■□□□□ 0.46
GABRE-202ENST00000417300 FAM50AQ14320 339 aaKnown RBP17.9■□□□□ 0.46
GABRE-202ENST00000417300 CAMSAP1Q5T5Y3 1602 aa17.9■□□□□ 0.46
GABRE-202ENST00000417300 RGS17Q9UGC6 210 aaPredicted RBP17.89■□□□□ 0.45
GABRE-202ENST00000417300 MYO5CQ9NQX4 1742 aa17.87■□□□□ 0.45
GABRE-202ENST00000417300 PKD2Q13563 968 aa17.86■□□□□ 0.45
GABRE-202ENST00000417300 C3P01024 1663 aa17.86■□□□□ 0.45
GABRE-202ENST00000417300 CDC42BPBQ9Y5S2 1711 aa17.86■□□□□ 0.45
GABRE-202ENST00000417300 CAMSAP2Q08AD1 1489 aa17.85■□□□□ 0.45
GABRE-202ENST00000417300 SCAPERQ9BY12 1400 aa17.85■□□□□ 0.45
GABRE-202ENST00000417300 SENP3Q9H4L4 574 aaPredicted RBP17.84■□□□□ 0.45
GABRE-202ENST00000417300 DNMT1P26358 1616 aaKnown RBP17.83■□□□□ 0.45
GABRE-202ENST00000417300 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.44
GABRE-202ENST00000417300 PPP6R1Q9UPN7 881 aa17.82■□□□□ 0.44
GABRE-202ENST00000417300 PTPRKQ15262 1439 aa17.8■□□□□ 0.44
GABRE-202ENST00000417300 ITGAEP38570 1179 aa17.79■□□□□ 0.44
GABRE-202ENST00000417300 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
GABRE-202ENST00000417300 PLCH2O75038 1416 aa17.79■□□□□ 0.44
GABRE-202ENST00000417300 SAMD9LQ8IVG5 1584 aa17.79■□□□□ 0.44
GABRE-202ENST00000417300 CROCC2H7BZ55 1655 aa17.78■□□□□ 0.44
GABRE-202ENST00000417300 DAPK1P53355 1430 aa17.78■□□□□ 0.44
GABRE-202ENST00000417300 ARHGAP5Q13017 1502 aa17.77■□□□□ 0.44
GABRE-202ENST00000417300 ARHGEF5Q12774 1597 aa17.77■□□□□ 0.44
GABRE-202ENST00000417300 ABCC5O15440 1437 aa17.76■□□□□ 0.43
GABRE-202ENST00000417300 POTEAQ6S8J7 498 aa17.76■□□□□ 0.43
GABRE-202ENST00000417300 ZNF644Q9H582 1327 aaPredicted RBP17.75■□□□□ 0.43
GABRE-202ENST00000417300 PLEKHH2Q8IVE3 1493 aa17.75■□□□□ 0.43
GABRE-202ENST00000417300 HFM1A2PYH4 1435 aa17.74■□□□□ 0.43
GABRE-202ENST00000417300 GCC2Q8IWJ2 1684 aa17.74■□□□□ 0.43
GABRE-202ENST00000417300 SETD5Q9C0A6 1442 aa17.73■□□□□ 0.43
GABRE-202ENST00000417300 PLA2R1Q13018 1463 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms