RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 ARAP3Q8WWN8 1544 aa22.3■■□□□ 1.16
LIMS2-209ENST00000410038 TEX14Q8IWB6 1497 aa22.28■■□□□ 1.16
LIMS2-209ENST00000410038 ARHGAP5Q13017 1502 aa22.27■■□□□ 1.16
LIMS2-209ENST00000410038 FANCAO15360 1455 aa22.26■■□□□ 1.15
LIMS2-209ENST00000410038 PHLDB1Q86UU1 1377 aa22.25■■□□□ 1.15
LIMS2-209ENST00000410038 CFAP74Q9C0B2 1584 aa22.25■■□□□ 1.15
LIMS2-209ENST00000410038 NEO1Q92859 1461 aa22.23■■□□□ 1.15
LIMS2-209ENST00000410038 MYOM3Q5VTT5 1437 aa22.22■■□□□ 1.15
LIMS2-209ENST00000410038 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
LIMS2-209ENST00000410038 CFDP1Q9UEE9 299 aaPredicted RBP22.21■■□□□ 1.15
LIMS2-209ENST00000410038 AKNAQ7Z591 1439 aa22.19■■□□□ 1.14
LIMS2-209ENST00000410038 SAMD9LQ8IVG5 1584 aa22.18■■□□□ 1.14
LIMS2-209ENST00000410038 KDM4FA0A1W2PPD8 638 aa22.17■■□□□ 1.14
LIMS2-209ENST00000410038 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
LIMS2-209ENST00000410038 MIA2Q96PC5 1412 aa22.16■■□□□ 1.14
LIMS2-209ENST00000410038 FGD6Q6ZV73 1430 aa22.15■■□□□ 1.14
LIMS2-209ENST00000410038 ADGRL1O94910 1474 aa22.15■■□□□ 1.14
LIMS2-209ENST00000410038 ZNF644Q9H582 1327 aaPredicted RBP22.14■■□□□ 1.13
LIMS2-209ENST00000410038 ABCC1P33527 1531 aa22.13■■□□□ 1.13
LIMS2-209ENST00000410038 PTPN23Q9H3S7 1636 aa22.12■■□□□ 1.13
LIMS2-209ENST00000410038 CAMSAP2Q08AD1 1489 aa22.12■■□□□ 1.13
LIMS2-209ENST00000410038 COL17A1Q9UMD9 1497 aaPredicted RBP22.12■■□□□ 1.13
LIMS2-209ENST00000410038 SCAPERQ9BY12 1400 aa22.11■■□□□ 1.13
LIMS2-209ENST00000410038 ARHGEF12Q9NZN5 1544 aa22.1■■□□□ 1.13
LIMS2-209ENST00000410038 PLEKHH2Q8IVE3 1493 aa22.1■■□□□ 1.13
LIMS2-209ENST00000410038 SYCP2Q9BX26 1530 aa22.09■■□□□ 1.13
LIMS2-209ENST00000410038 RICTORQ6R327 1708 aa22.08■■□□□ 1.13
LIMS2-209ENST00000410038 KIAA1107Q9UPP5 1409 aa22.08■■□□□ 1.13
LIMS2-209ENST00000410038 DENND4BO75064 1496 aaPredicted RBP22.08■■□□□ 1.12
LIMS2-209ENST00000410038 TCOF1Q13428 1488 aaKnown RBP22.08■■□□□ 1.12
LIMS2-209ENST00000410038 HNRNPMP52272 730 aaKnown RBP eCLIP22.06■■□□□ 1.12
LIMS2-209ENST00000410038 FRMPD1Q5SYB0 1578 aa22.05■■□□□ 1.12
LIMS2-209ENST00000410038 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
LIMS2-209ENST00000410038 MBD5Q9P267 1494 aa22.04■■□□□ 1.12
LIMS2-209ENST00000410038 POGZQ7Z3K3 1410 aa22.04■■□□□ 1.12
LIMS2-209ENST00000410038 TRAPPC8Q9Y2L5 1435 aa22.04■■□□□ 1.12
LIMS2-209ENST00000410038 RRBP1Q9P2E9 1410 aaKnown RBP22.03■■□□□ 1.12
LIMS2-209ENST00000410038 ZNF518AQ6AHZ1 1483 aa22.02■■□□□ 1.11
LIMS2-209ENST00000410038 ARHGEF5Q12774 1597 aa22.01■■□□□ 1.11
LIMS2-209ENST00000410038 FAM50AQ14320 339 aaKnown RBP22.01■■□□□ 1.11
LIMS2-209ENST00000410038 AFAP1Q8N556 730 aa22.01■■□□□ 1.11
LIMS2-209ENST00000410038 KDM5CP41229 1560 aa21.99■■□□□ 1.11
LIMS2-209ENST00000410038 CCDC141Q6ZP82 1450 aa21.98■■□□□ 1.11
LIMS2-209ENST00000410038 DNMT1P26358 1616 aaKnown RBP21.97■■□□□ 1.11
LIMS2-209ENST00000410038 ZMYM4Q5VZL5 1548 aa21.97■■□□□ 1.11
LIMS2-209ENST00000410038 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.97■■□□□ 1.11
LIMS2-209ENST00000410038 RSPH4AQ5TD94 716 aa21.96■■□□□ 1.11
LIMS2-209ENST00000410038 CROCC2H7BZ55 1655 aa21.95■■□□□ 1.1
LIMS2-209ENST00000410038 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
LIMS2-209ENST00000410038 ABCC5O15440 1437 aa21.93■■□□□ 1.1
LIMS2-209ENST00000410038 DAPK1P53355 1430 aa21.92■■□□□ 1.1
LIMS2-209ENST00000410038 KIDINS220Q9ULH0 1771 aa21.92■■□□□ 1.1
LIMS2-209ENST00000410038 INO80Q9ULG1 1556 aaPredicted RBP21.91■■□□□ 1.1
LIMS2-209ENST00000410038 MLH3Q9UHC1 1453 aa21.91■■□□□ 1.1
LIMS2-209ENST00000410038 SPAG9O60271 1321 aaKnown RBP21.91■■□□□ 1.1
LIMS2-209ENST00000410038 MAGI2Q86UL8 1455 aa21.9■■□□□ 1.1
LIMS2-209ENST00000410038 ZFYVE16Q7Z3T8 1539 aa21.89■■□□□ 1.1
LIMS2-209ENST00000410038 TSPY4P0CV99 314 aa21.89■■□□□ 1.1
LIMS2-209ENST00000410038 TSPY10P0CW01 314 aa21.89■■□□□ 1.1
LIMS2-209ENST00000410038 MAST1Q9Y2H9 1570 aa21.89■■□□□ 1.09
LIMS2-209ENST00000410038 ATP7AQ04656 1500 aa21.89■■□□□ 1.09
LIMS2-209ENST00000410038 SHANK2Q9UPX8 1470 aa21.88■■□□□ 1.09
LIMS2-209ENST00000410038 C9orf84Q5VXU9 1444 aa21.87■■□□□ 1.09
LIMS2-209ENST00000410038 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
LIMS2-209ENST00000410038 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
LIMS2-209ENST00000410038 MYT1LQ9UL68 1186 aa21.86■■□□□ 1.09
LIMS2-209ENST00000410038 PTPRKQ15262 1439 aa21.86■■□□□ 1.09
LIMS2-209ENST00000410038 ARHGEF40Q8TER5 1519 aa21.85■■□□□ 1.09
LIMS2-209ENST00000410038 ABCA6Q8N139 1617 aa21.85■■□□□ 1.09
LIMS2-209ENST00000410038 ITGAEP38570 1179 aa21.85■■□□□ 1.09
LIMS2-209ENST00000410038 DIP2CQ9Y2E4 1556 aa21.84■■□□□ 1.09
LIMS2-209ENST00000410038 ADGBQ8N7X0 1667 aa21.83■■□□□ 1.09
LIMS2-209ENST00000410038 CHIC2Q9UKJ5 165 aa21.82■■□□□ 1.08
LIMS2-209ENST00000410038 PLXNC1O60486 1568 aa21.81■■□□□ 1.08
LIMS2-209ENST00000410038 ATP10AO60312 1499 aa21.79■■□□□ 1.08
LIMS2-209ENST00000410038 ADGRL2O95490 1459 aa21.79■■□□□ 1.08
LIMS2-209ENST00000410038 NCOA1Q15788 1441 aa21.77■■□□□ 1.08
LIMS2-209ENST00000410038 ANKRD30AQ9BXX3 1397 aa21.76■■□□□ 1.07
LIMS2-209ENST00000410038 SIGLEC1Q9BZZ2 1709 aa21.75■■□□□ 1.07
LIMS2-209ENST00000410038 REREQ9P2R6 1566 aa21.75■■□□□ 1.07
LIMS2-209ENST00000410038 ROCK1Q13464 1354 aa21.74■■□□□ 1.07
LIMS2-209ENST00000410038 A2MP01023 1474 aa21.73■■□□□ 1.07
LIMS2-209ENST00000410038 RRP7BPQ9NSQ0 103 aa21.73■■□□□ 1.07
LIMS2-209ENST00000410038 KIF15Q9NS87 1388 aa21.73■■□□□ 1.07
LIMS2-209ENST00000410038 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
LIMS2-209ENST00000410038 DHX29Q7Z478 1369 aaKnown RBP21.7■■□□□ 1.07
LIMS2-209ENST00000410038 TRIM26Q12899 539 aaPredicted RBP21.69■■□□□ 1.06
LIMS2-209ENST00000410038 AGLP35573 1532 aa21.67■■□□□ 1.06
LIMS2-209ENST00000410038 GCC2Q8IWJ2 1684 aa21.66■■□□□ 1.06
LIMS2-209ENST00000410038 ADAMTSL3P82987 1691 aa21.65■■□□□ 1.06
LIMS2-209ENST00000410038 EIF2AK4Q9P2K8 1649 aaKnown RBP21.64■■□□□ 1.06
LIMS2-209ENST00000410038 BCORL1Q5H9F3 1711 aa21.64■■□□□ 1.05
LIMS2-209ENST00000410038 NAIPQ13075 1403 aa21.64■■□□□ 1.05
LIMS2-209ENST00000410038 ERBINQ96RT1 1412 aa21.64■■□□□ 1.05
LIMS2-209ENST00000410038 ARID4BQ4LE39 1312 aaPredicted RBP21.64■■□□□ 1.05
LIMS2-209ENST00000410038 HFM1A2PYH4 1435 aa21.63■■□□□ 1.05
LIMS2-209ENST00000410038 ANKRD50Q9ULJ7 1429 aa21.62■■□□□ 1.05
LIMS2-209ENST00000410038 PTPRMP28827 1452 aa21.6■■□□□ 1.05
LIMS2-209ENST00000410038 KIF3BO15066 747 aa21.6■■□□□ 1.05
LIMS2-209ENST00000410038 RNF17Q9BXT8 1623 aaKnown RBP21.57■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms