RNA–Protein interactions for RNA: ENST00000410038.5

LIMS2-209, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2 BASIC

Gene LIMS2, Length 1,695 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-209ENST00000410038 NISCHQ9Y2I1 1504 aa34.2■■■■□ 3.07
LIMS2-209ENST00000410038 CCDC180Q9P1Z9 1646 aa30.24■■■□□ 2.43
LIMS2-209ENST00000410038 ABCC9O60706 1549 aa29.34■■■□□ 2.29
LIMS2-209ENST00000410038 ZCCHC6Q5VYS8 1495 aaKnown RBP28.58■■■□□ 2.17
LIMS2-209ENST00000410038 DCAF8L2P0C7V8 631 aa28.39■■■□□ 2.14
LIMS2-209ENST00000410038 NACADO15069 1562 aa28.31■■■□□ 2.12
LIMS2-209ENST00000410038 DCAF1Q9Y4B6 1507 aa28.31■■■□□ 2.12
LIMS2-209ENST00000410038 MYO15BQ96JP2 1530 aa28.26■■■□□ 2.11
LIMS2-209ENST00000410038 RB1CC1Q8TDY2 1594 aa28.25■■■□□ 2.11
LIMS2-209ENST00000410038 UNC13AQ9UPW8 1703 aa27.7■■■□□ 2.03
LIMS2-209ENST00000410038 SCRIBQ14160 1630 aa27.63■■■□□ 2.01
LIMS2-209ENST00000410038 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
LIMS2-209ENST00000410038 BICRAQ9NZM4 1560 aa27.41■■□□□ 1.98
LIMS2-209ENST00000410038 PABPN1Q86U42 306 aaKnown RBP eCLIP27.33■■□□□ 1.97
LIMS2-209ENST00000410038 SHROOM4Q9ULL8 1493 aa27.26■■□□□ 1.95
LIMS2-209ENST00000410038 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.85
LIMS2-209ENST00000410038 CECR2Q9BXF3 1484 aa26.61■■□□□ 1.85
LIMS2-209ENST00000410038 CC2D2AQ9P2K1 1620 aa26.56■■□□□ 1.84
LIMS2-209ENST00000410038 BAZ1AQ9NRL2 1556 aaPredicted RBP26.48■■□□□ 1.83
LIMS2-209ENST00000410038 SMARCA4P51532 1647 aa26.46■■□□□ 1.83
LIMS2-209ENST00000410038 MROH2BQ7Z745 1585 aa26.38■■□□□ 1.81
LIMS2-209ENST00000410038 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
LIMS2-209ENST00000410038 PEG3Q9GZU2 1588 aa26.19■■□□□ 1.78
LIMS2-209ENST00000410038 ATAD2BQ9ULI0 1458 aa26.19■■□□□ 1.78
LIMS2-209ENST00000410038 SMARCA2P51531 1590 aa26.18■■□□□ 1.78
LIMS2-209ENST00000410038 WIZO95785 1651 aa26.14■■□□□ 1.77
LIMS2-209ENST00000410038 NCAPD3P42695 1498 aa26.11■■□□□ 1.77
LIMS2-209ENST00000410038 HMGXB3Q12766 1538 aa26.03■■□□□ 1.76
LIMS2-209ENST00000410038 BAZ1BQ9UIG0 1483 aaKnown RBP26■■□□□ 1.75
LIMS2-209ENST00000410038 TOP2AP11388 1531 aaKnown RBP25.85■■□□□ 1.73
LIMS2-209ENST00000410038 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
LIMS2-209ENST00000410038 CCDC88BA6NC98 1476 aa25.54■■□□□ 1.68
LIMS2-209ENST00000410038 CUX2O14529 1486 aa25.44■■□□□ 1.66
LIMS2-209ENST00000410038 ERCC6Q03468 1493 aa25.41■■□□□ 1.66
LIMS2-209ENST00000410038 NESP48681 1621 aa25.39■■□□□ 1.66
LIMS2-209ENST00000410038 DNAJC5Q9H3Z4 198 aa25.39■■□□□ 1.65
LIMS2-209ENST00000410038 LAMC3Q9Y6N6 1575 aa25.38■■□□□ 1.65
LIMS2-209ENST00000410038 CADPSQ9ULU8 1353 aa25.37■■□□□ 1.65
LIMS2-209ENST00000410038 CFTRP13569 1480 aa25.31■■□□□ 1.64
LIMS2-209ENST00000410038 PRDM2Q13029 1718 aa25.23■■□□□ 1.63
LIMS2-209ENST00000410038 PDS5BQ9NTI5 1447 aa25.16■■□□□ 1.62
LIMS2-209ENST00000410038 KIF21AQ7Z4S6 1674 aa25.14■■□□□ 1.62
LIMS2-209ENST00000410038 FANCD2Q9BXW9 1451 aa25.09■■□□□ 1.61
LIMS2-209ENST00000410038 CEP164Q9UPV0 1460 aa25.02■■□□□ 1.6
LIMS2-209ENST00000410038 THOC2Q8NI27 1593 aaKnown RBP25.01■■□□□ 1.59
LIMS2-209ENST00000410038 MRC2Q9UBG0 1479 aa24.89■■□□□ 1.58
LIMS2-209ENST00000410038 URB2Q14146 1524 aaKnown RBP24.83■■□□□ 1.56
LIMS2-209ENST00000410038 WDR62O43379 1518 aa24.81■■□□□ 1.56
LIMS2-209ENST00000410038 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
LIMS2-209ENST00000410038 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
LIMS2-209ENST00000410038 TOPBP1Q92547 1522 aa24.74■■□□□ 1.55
LIMS2-209ENST00000410038 CUX1P39880 1505 aa24.71■■□□□ 1.55
LIMS2-209ENST00000410038 WRNQ14191 1432 aaPredicted RBP eCLIP24.69■■□□□ 1.54
LIMS2-209ENST00000410038 SYNJ1O43426 1573 aa24.64■■□□□ 1.54
LIMS2-209ENST00000410038 BIVM-ERCC5R4GMW8 1640 aa24.62■■□□□ 1.53
LIMS2-209ENST00000410038 TOP2BQ02880 1626 aa24.62■■□□□ 1.53
LIMS2-209ENST00000410038 POLA1P09884 1462 aaPredicted RBP24.56■■□□□ 1.52
LIMS2-209ENST00000410038 FGD5Q6ZNL6 1462 aa24.56■■□□□ 1.52
LIMS2-209ENST00000410038 TARBP1Q13395 1621 aaKnown RBP24.47■■□□□ 1.51
LIMS2-209ENST00000410038 IFT140Q96RY7 1462 aa24.46■■□□□ 1.51
LIMS2-209ENST00000410038 RAD54L2Q9Y4B4 1467 aa24.45■■□□□ 1.5
LIMS2-209ENST00000410038 SOGA1O94964 1423 aa24.45■■□□□ 1.5
LIMS2-209ENST00000410038 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
LIMS2-209ENST00000410038 WDR97A6NE52 1622 aa24.37■■□□□ 1.49
LIMS2-209ENST00000410038 CHIC1Q5VXU3 224 aa24.37■■□□□ 1.49
LIMS2-209ENST00000410038 ZNF608Q9ULD9 1512 aaPredicted RBP24.35■■□□□ 1.49
LIMS2-209ENST00000410038 ABCA10Q8WWZ4 1543 aa24.34■■□□□ 1.49
LIMS2-209ENST00000410038 EIF4G3O43432 1585 aaKnown RBP24.28■■□□□ 1.48
LIMS2-209ENST00000410038 TDRD9Q8NDG6 1382 aaKnown RBP24.27■■□□□ 1.48
LIMS2-209ENST00000410038 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
LIMS2-209ENST00000410038 ABCA5Q8WWZ7 1642 aa24.23■■□□□ 1.47
LIMS2-209ENST00000410038 OSCARQ8IYS5 282 aa24.22■■□□□ 1.47
LIMS2-209ENST00000410038 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
LIMS2-209ENST00000410038 PBRM1Q86U86 1689 aa24.16■■□□□ 1.46
LIMS2-209ENST00000410038 KIF27Q86VH2 1401 aa24.13■■□□□ 1.45
LIMS2-209ENST00000410038 GRIN2BQ13224 1484 aa24.12■■□□□ 1.45
LIMS2-209ENST00000410038 RUSC2Q8N2Y8 1516 aa24.08■■□□□ 1.45
LIMS2-209ENST00000410038 ERICH3Q5RHP9 1530 aa24.06■■□□□ 1.44
LIMS2-209ENST00000410038 SNAPC4Q5SXM2 1469 aa24.04■■□□□ 1.44
LIMS2-209ENST00000410038 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
LIMS2-209ENST00000410038 IGF1RP08069 1367 aa23.99■■□□□ 1.43
LIMS2-209ENST00000410038 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
LIMS2-209ENST00000410038 EEA1Q15075 1411 aa23.93■■□□□ 1.42
LIMS2-209ENST00000410038 CUL7Q14999 1698 aa23.93■■□□□ 1.42
LIMS2-209ENST00000410038 CHD1O14646 1710 aa23.93■■□□□ 1.42
LIMS2-209ENST00000410038 SYNJ2O15056 1496 aa23.92■■□□□ 1.42
LIMS2-209ENST00000410038 FHAD1B1AJZ9 1412 aa23.91■■□□□ 1.42
LIMS2-209ENST00000410038 FAM9AQ8IZU1 332 aaPredicted RBP23.89■■□□□ 1.41
LIMS2-209ENST00000410038 RIMBP3CA6NJZ7 1639 aa23.88■■□□□ 1.41
LIMS2-209ENST00000410038 RIMBP3BA6NNM3 1639 aa23.88■■□□□ 1.41
LIMS2-209ENST00000410038 RIMBP3Q9UFD9 1639 aa23.88■■□□□ 1.41
LIMS2-209ENST00000410038 FBLN2P98095 1184 aa23.87■■□□□ 1.41
LIMS2-209ENST00000410038 CHMP7Q8WUX9 453 aaPredicted RBP23.86■■□□□ 1.41
LIMS2-209ENST00000410038 CSRNP3Q8WYN3 585 aa23.86■■□□□ 1.41
LIMS2-209ENST00000410038 CARMIL1Q5VZK9 1371 aa23.85■■□□□ 1.41
LIMS2-209ENST00000410038 GRIN2AQ12879 1464 aa23.82■■□□□ 1.4
LIMS2-209ENST00000410038 ARHGEF11O15085 1522 aa23.81■■□□□ 1.4
LIMS2-209ENST00000410038 PRXQ9BXM0 1461 aa23.79■■□□□ 1.4
LIMS2-209ENST00000410038 RAPGEF2Q9Y4G8 1499 aa23.77■■□□□ 1.4
LIMS2-209ENST00000410038 CEP170Q5SW79 1584 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms