RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 FANCAO15360 1455 aa31.85■■■□□ 2.69
C4orf48-202ENST00000409860 PHLDB1Q86UU1 1377 aa31.85■■■□□ 2.69
C4orf48-202ENST00000409860 ITSN2Q9NZM3 1697 aa31.85■■■□□ 2.69
C4orf48-202ENST00000409860 MYOM3Q5VTT5 1437 aa31.84■■■□□ 2.69
C4orf48-202ENST00000409860 CDC42BPAQ5VT25 1732 aa31.84■■■□□ 2.69
C4orf48-202ENST00000409860 NEO1Q92859 1461 aa31.83■■■□□ 2.69
C4orf48-202ENST00000409860 CFAP74Q9C0B2 1584 aa31.81■■■□□ 2.68
C4orf48-202ENST00000409860 CDC42BPBQ9Y5S2 1711 aa31.79■■■□□ 2.68
C4orf48-202ENST00000409860 MIA2Q96PC5 1412 aa31.77■■■□□ 2.68
C4orf48-202ENST00000409860 ZNF777Q9ULD5 760 aaPredicted RBP31.77■■■□□ 2.68
C4orf48-202ENST00000409860 AKNAQ7Z591 1439 aa31.76■■■□□ 2.68
C4orf48-202ENST00000409860 FGD6Q6ZV73 1430 aa31.72■■■□□ 2.67
C4orf48-202ENST00000409860 ADGRL1O94910 1474 aa31.71■■■□□ 2.67
C4orf48-202ENST00000409860 PLEKHH2Q8IVE3 1493 aa31.7■■■□□ 2.66
C4orf48-202ENST00000409860 SAMD9LQ8IVG5 1584 aa31.68■■■□□ 2.66
C4orf48-202ENST00000409860 ZNF644Q9H582 1327 aaPredicted RBP31.66■■■□□ 2.66
C4orf48-202ENST00000409860 SCAPERQ9BY12 1400 aa31.66■■■□□ 2.66
C4orf48-202ENST00000409860 CAMSAP2Q08AD1 1489 aa31.65■■■□□ 2.66
C4orf48-202ENST00000409860 ABCC1P33527 1531 aa31.65■■■□□ 2.66
C4orf48-202ENST00000409860 KIAA1107Q9UPP5 1409 aa31.64■■■□□ 2.66
C4orf48-202ENST00000409860 DENND4BO75064 1496 aaPredicted RBP31.62■■■□□ 2.65
C4orf48-202ENST00000409860 PTPN23Q9H3S7 1636 aa31.61■■■□□ 2.65
C4orf48-202ENST00000409860 TCOF1Q13428 1488 aaKnown RBP31.6■■■□□ 2.65
C4orf48-202ENST00000409860 SYCP2Q9BX26 1530 aa31.59■■■□□ 2.65
C4orf48-202ENST00000409860 KDM6BO15054 1643 aa31.59■■■□□ 2.65
C4orf48-202ENST00000409860 HNRNPMP52272 730 aaKnown RBP eCLIP31.57■■■□□ 2.64
C4orf48-202ENST00000409860 ARHGEF12Q9NZN5 1544 aa31.57■■■□□ 2.64
C4orf48-202ENST00000409860 COL17A1Q9UMD9 1497 aaPredicted RBP31.57■■■□□ 2.64
C4orf48-202ENST00000409860 POGZQ7Z3K3 1410 aa31.57■■■□□ 2.64
C4orf48-202ENST00000409860 FAM50AQ14320 339 aaKnown RBP31.56■■■□□ 2.64
C4orf48-202ENST00000409860 RRBP1Q9P2E9 1410 aaKnown RBP31.56■■■□□ 2.64
C4orf48-202ENST00000409860 RAPGEF3O95398 923 aa31.53■■■□□ 2.64
C4orf48-202ENST00000409860 ZNF518AQ6AHZ1 1483 aa31.52■■■□□ 2.64
C4orf48-202ENST00000409860 MBD5Q9P267 1494 aa31.52■■■□□ 2.64
C4orf48-202ENST00000409860 TRAPPC8Q9Y2L5 1435 aa31.52■■■□□ 2.64
C4orf48-202ENST00000409860 RSPH4AQ5TD94 716 aa31.52■■■□□ 2.64
C4orf48-202ENST00000409860 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.49■■■□□ 2.63
C4orf48-202ENST00000409860 CCDC141Q6ZP82 1450 aa31.48■■■□□ 2.63
C4orf48-202ENST00000409860 AFAP1Q8N556 730 aa31.48■■■□□ 2.63
C4orf48-202ENST00000409860 ARHGEF5Q12774 1597 aa31.47■■■□□ 2.63
C4orf48-202ENST00000409860 FRMPD1Q5SYB0 1578 aa31.46■■■□□ 2.63
C4orf48-202ENST00000409860 RICTORQ6R327 1708 aa31.45■■■□□ 2.63
C4orf48-202ENST00000409860 KDM5CP41229 1560 aa31.43■■■□□ 2.62
C4orf48-202ENST00000409860 ZMYM4Q5VZL5 1548 aa31.41■■■□□ 2.62
C4orf48-202ENST00000409860 TSPY4P0CV99 314 aa31.41■■■□□ 2.62
C4orf48-202ENST00000409860 TSPY10P0CW01 314 aa31.41■■■□□ 2.62
C4orf48-202ENST00000409860 SPAG9O60271 1321 aaKnown RBP31.41■■■□□ 2.62
C4orf48-202ENST00000409860 DAPK1P53355 1430 aa31.41■■■□□ 2.62
C4orf48-202ENST00000409860 ABCC5O15440 1437 aa31.4■■■□□ 2.62
C4orf48-202ENST00000409860 DNMT1P26358 1616 aaKnown RBP31.39■■■□□ 2.62
C4orf48-202ENST00000409860 MYT1LQ9UL68 1186 aa31.39■■■□□ 2.62
C4orf48-202ENST00000409860 MAGI2Q86UL8 1455 aa31.36■■■□□ 2.61
C4orf48-202ENST00000409860 MLH3Q9UHC1 1453 aa31.36■■■□□ 2.61
C4orf48-202ENST00000409860 SHANK2Q9UPX8 1470 aa31.35■■■□□ 2.61
C4orf48-202ENST00000409860 HECW2Q9P2P5 1572 aa31.34■■■□□ 2.61
C4orf48-202ENST00000409860 C9orf84Q5VXU9 1444 aa31.33■■■□□ 2.61
C4orf48-202ENST00000409860 RTEL1-TNFRSF6BF6WH68 1400 aa31.32■■■□□ 2.61
C4orf48-202ENST00000409860 ITGAEP38570 1179 aa31.32■■■□□ 2.6
C4orf48-202ENST00000409860 ATP7AQ04656 1500 aa31.3■■■□□ 2.6
C4orf48-202ENST00000409860 ZFYVE16Q7Z3T8 1539 aa31.3■■■□□ 2.6
C4orf48-202ENST00000409860 MAST1Q9Y2H9 1570 aa31.3■■■□□ 2.6
C4orf48-202ENST00000409860 CROCC2H7BZ55 1655 aa31.29■■■□□ 2.6
C4orf48-202ENST00000409860 INO80Q9ULG1 1556 aaPredicted RBP31.29■■■□□ 2.6
C4orf48-202ENST00000409860 YEATS2Q9ULM3 1422 aa31.26■■■□□ 2.6
C4orf48-202ENST00000409860 ARHGEF40Q8TER5 1519 aa31.25■■■□□ 2.59
C4orf48-202ENST00000409860 CHIC2Q9UKJ5 165 aa31.25■■■□□ 2.59
C4orf48-202ENST00000409860 PTPRKQ15262 1439 aa31.24■■■□□ 2.59
C4orf48-202ENST00000409860 KIDINS220Q9ULH0 1771 aa31.24■■■□□ 2.59
C4orf48-202ENST00000409860 ANKRD30AQ9BXX3 1397 aa31.22■■■□□ 2.59
C4orf48-202ENST00000409860 ADGRL2O95490 1459 aa31.2■■■□□ 2.58
C4orf48-202ENST00000409860 DIP2CQ9Y2E4 1556 aa31.19■■■□□ 2.58
C4orf48-202ENST00000409860 ABCA6Q8N139 1617 aa31.19■■■□□ 2.58
C4orf48-202ENST00000409860 ATP10AO60312 1499 aa31.19■■■□□ 2.58
C4orf48-202ENST00000409860 ROCK1Q13464 1354 aa31.17■■■□□ 2.58
C4orf48-202ENST00000409860 PLXNC1O60486 1568 aa31.17■■■□□ 2.58
C4orf48-202ENST00000409860 NCOA1Q15788 1441 aa31.15■■■□□ 2.58
C4orf48-202ENST00000409860 KIF15Q9NS87 1388 aa31.15■■■□□ 2.58
C4orf48-202ENST00000409860 ADGBQ8N7X0 1667 aa31.14■■■□□ 2.58
C4orf48-202ENST00000409860 RRP7BPQ9NSQ0 103 aa31.14■■■□□ 2.58
C4orf48-202ENST00000409860 TRIM26Q12899 539 aaPredicted RBP31.13■■■□□ 2.57
C4orf48-202ENST00000409860 A2MP01023 1474 aa31.12■■■□□ 2.57
C4orf48-202ENST00000409860 DHX29Q7Z478 1369 aaKnown RBP31.09■■■□□ 2.57
C4orf48-202ENST00000409860 REREQ9P2R6 1566 aa31.09■■■□□ 2.57
C4orf48-202ENST00000409860 DUOX2Q9NRD8 1548 aa31.08■■■□□ 2.57
C4orf48-202ENST00000409860 ARID4BQ4LE39 1312 aaPredicted RBP31.02■■■□□ 2.56
C4orf48-202ENST00000409860 ERBINQ96RT1 1412 aa31.01■■■□□ 2.55
C4orf48-202ENST00000409860 HFM1A2PYH4 1435 aa31■■■□□ 2.55
C4orf48-202ENST00000409860 AGLP35573 1532 aa31■■■□□ 2.55
C4orf48-202ENST00000409860 ANKRD50Q9ULJ7 1429 aa30.99■■■□□ 2.55
C4orf48-202ENST00000409860 NAIPQ13075 1403 aa30.97■■■□□ 2.55
C4orf48-202ENST00000409860 KIF3BO15066 747 aa30.94■■■□□ 2.54
C4orf48-202ENST00000409860 EIF2AK4Q9P2K8 1649 aaKnown RBP30.92■■■□□ 2.54
C4orf48-202ENST00000409860 SIGLEC1Q9BZZ2 1709 aa30.92■■■□□ 2.54
C4orf48-202ENST00000409860 GCC2Q8IWJ2 1684 aa30.91■■■□□ 2.54
C4orf48-202ENST00000409860 MLECQ14165 292 aa30.87■■■□□ 2.53
C4orf48-202ENST00000409860 SETD5Q9C0A6 1442 aa30.87■■■□□ 2.53
C4orf48-202ENST00000409860 BCORL1Q5H9F3 1711 aa30.87■■■□□ 2.53
C4orf48-202ENST00000409860 GGT6Q6P531 493 aa30.85■■■□□ 2.53
C4orf48-202ENST00000409860 RNF17Q9BXT8 1623 aaKnown RBP30.81■■■□□ 2.52
C4orf48-202ENST00000409860 PPP6R1Q9UPN7 881 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms