RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 MIA2Q96PC5 1412 aa19.1■□□□□ 0.65
PMS1-204ENST00000409823 PTPN23Q9H3S7 1636 aa19.1■□□□□ 0.65
PMS1-204ENST00000409823 CDC42BPBQ9Y5S2 1711 aa19.09■□□□□ 0.65
PMS1-204ENST00000409823 DIP2BQ9P265 1576 aa19.09■□□□□ 0.65
PMS1-204ENST00000409823 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.654e-6■■■■□ 23.6
PMS1-204ENST00000409823 MYO5CQ9NQX4 1742 aa19.08■□□□□ 0.65
PMS1-204ENST00000409823 ITSN2Q9NZM3 1697 aa19.08■□□□□ 0.65
PMS1-204ENST00000409823 EFCAB2Q5VUJ9 269 aa19.08■□□□□ 0.65
PMS1-204ENST00000409823 PREX2Q70Z35 1606 aa19.08■□□□□ 0.64
PMS1-204ENST00000409823 CAMSAP2Q08AD1 1489 aa19.07■□□□□ 0.64
PMS1-204ENST00000409823 CHIC2Q9UKJ5 165 aa19.05■□□□□ 0.64
PMS1-204ENST00000409823 FANCAO15360 1455 aa19.05■□□□□ 0.64
PMS1-204ENST00000409823 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
PMS1-204ENST00000409823 SAMD9LQ8IVG5 1584 aa19.02■□□□□ 0.64
PMS1-204ENST00000409823 TSPOAP1O95153 1857 aa19.01■□□□□ 0.63
PMS1-204ENST00000409823 GLI2P10070 1586 aa19.01■□□□□ 0.63
PMS1-204ENST00000409823 PTPRKQ15262 1439 aa19.01■□□□□ 0.63
PMS1-204ENST00000409823 MAP3K4Q9Y6R4 1608 aa19■□□□□ 0.63
PMS1-204ENST00000409823 KIF13AQ9H1H9 1805 aa19■□□□□ 0.63
PMS1-204ENST00000409823 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.99■□□□□ 0.63
PMS1-204ENST00000409823 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
PMS1-204ENST00000409823 ARHGEF12Q9NZN5 1544 aa18.98■□□□□ 0.63
PMS1-204ENST00000409823 AFAP1Q8N556 730 aa18.98■□□□□ 0.63
PMS1-204ENST00000409823 AKNAQ7Z591 1439 aa18.97■□□□□ 0.63
PMS1-204ENST00000409823 ABCC5O15440 1437 aa18.97■□□□□ 0.63
PMS1-204ENST00000409823 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
PMS1-204ENST00000409823 DAPK1P53355 1430 aa18.96■□□□□ 0.63
PMS1-204ENST00000409823 ARAP3Q8WWN8 1544 aa18.96■□□□□ 0.63
PMS1-204ENST00000409823 MBD5Q9P267 1494 aa18.96■□□□□ 0.63
PMS1-204ENST00000409823 SCAPERQ9BY12 1400 aa18.96■□□□□ 0.63
PMS1-204ENST00000409823 RRP7BPQ9NSQ0 103 aa18.95■□□□□ 0.62
PMS1-204ENST00000409823 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
PMS1-204ENST00000409823 RAPGEF3O95398 923 aa18.94■□□□□ 0.62
PMS1-204ENST00000409823 TSPY4P0CV99 314 aa18.93■□□□□ 0.62
PMS1-204ENST00000409823 TSPY10P0CW01 314 aa18.93■□□□□ 0.62
PMS1-204ENST00000409823 ABCC1P33527 1531 aa18.93■□□□□ 0.62
PMS1-204ENST00000409823 KIAA1107Q9UPP5 1409 aa18.91■□□□□ 0.62
PMS1-204ENST00000409823 DNMT1P26358 1616 aaKnown RBP18.91■□□□□ 0.62
PMS1-204ENST00000409823 MYT1LQ9UL68 1186 aa18.91■□□□□ 0.62
PMS1-204ENST00000409823 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
PMS1-204ENST00000409823 PPRC1Q5VV67 1664 aaKnown RBP18.9■□□□□ 0.62
PMS1-204ENST00000409823 CCDC141Q6ZP82 1450 aa18.89■□□□□ 0.61
PMS1-204ENST00000409823 NEO1Q92859 1461 aa18.89■□□□□ 0.61
PMS1-204ENST00000409823 C9orf84Q5VXU9 1444 aa18.87■□□□□ 0.61
PMS1-204ENST00000409823 RSPH4AQ5TD94 716 aa18.87■□□□□ 0.61
PMS1-204ENST00000409823 TEX14Q8IWB6 1497 aa18.87■□□□□ 0.61
PMS1-204ENST00000409823 ARHGEF5Q12774 1597 aa18.85■□□□□ 0.61
PMS1-204ENST00000409823 SPAG9O60271 1321 aaKnown RBP18.85■□□□□ 0.61
PMS1-204ENST00000409823 CFAP74Q9C0B2 1584 aa18.85■□□□□ 0.61
PMS1-204ENST00000409823 DENND4BO75064 1496 aaPredicted RBP18.83■□□□□ 0.6
PMS1-204ENST00000409823 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
PMS1-204ENST00000409823 COL17A1Q9UMD9 1497 aaPredicted RBP18.82■□□□□ 0.6
PMS1-204ENST00000409823 NCOA1Q15788 1441 aa18.82■□□□□ 0.6
PMS1-204ENST00000409823 CROCC2H7BZ55 1655 aa18.81■□□□□ 0.6
PMS1-204ENST00000409823 ZNF518AQ6AHZ1 1483 aa18.81■□□□□ 0.6
PMS1-204ENST00000409823 ANKRD30AQ9BXX3 1397 aa18.81■□□□□ 0.6
PMS1-204ENST00000409823 NAIPQ13075 1403 aa18.8■□□□□ 0.6
PMS1-204ENST00000409823 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
PMS1-204ENST00000409823 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
PMS1-204ENST00000409823 SHANK2Q9UPX8 1470 aa18.79■□□□□ 0.6
PMS1-204ENST00000409823 HFM1A2PYH4 1435 aa18.79■□□□□ 0.6
PMS1-204ENST00000409823 KIF15Q9NS87 1388 aa18.78■□□□□ 0.6
PMS1-204ENST00000409823 ROCK1Q13464 1354 aa18.78■□□□□ 0.6
PMS1-204ENST00000409823 ADGRL2O95490 1459 aa18.75■□□□□ 0.59
PMS1-204ENST00000409823 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
PMS1-204ENST00000409823 KDM6BO15054 1643 aa18.74■□□□□ 0.59
PMS1-204ENST00000409823 ATP7AQ04656 1500 aa18.73■□□□□ 0.59
PMS1-204ENST00000409823 FRMPD1Q5SYB0 1578 aa18.73■□□□□ 0.59
PMS1-204ENST00000409823 RICTORQ6R327 1708 aa18.73■□□□□ 0.59
PMS1-204ENST00000409823 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
PMS1-204ENST00000409823 KDM5CP41229 1560 aa18.72■□□□□ 0.59
PMS1-204ENST00000409823 ANKRD50Q9ULJ7 1429 aa18.71■□□□□ 0.59
PMS1-204ENST00000409823 YEATS2Q9ULM3 1422 aa18.71■□□□□ 0.59
PMS1-204ENST00000409823 MAST1Q9Y2H9 1570 aa18.71■□□□□ 0.59
PMS1-204ENST00000409823 RTEL1-TNFRSF6BF6WH68 1400 aa18.71■□□□□ 0.59
PMS1-204ENST00000409823 TRIM52Q96A61 297 aa18.7■□□□□ 0.58
PMS1-204ENST00000409823 INO80Q9ULG1 1556 aaPredicted RBP18.7■□□□□ 0.58
PMS1-204ENST00000409823 KIDINS220Q9ULH0 1771 aa18.7■□□□□ 0.58
PMS1-204ENST00000409823 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
PMS1-204ENST00000409823 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
PMS1-204ENST00000409823 GCC2Q8IWJ2 1684 aa18.67■□□□□ 0.58
PMS1-204ENST00000409823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.67■□□□□ 0.584e-6■■□□□ 13.1
PMS1-204ENST00000409823 PLXNC1O60486 1568 aa18.66■□□□□ 0.58
PMS1-204ENST00000409823 CCER1Q8TC90 406 aaPredicted RBP18.65■□□□□ 0.58
PMS1-204ENST00000409823 ABCA6Q8N139 1617 aa18.64■□□□□ 0.57
PMS1-204ENST00000409823 KIF3BO15066 747 aa18.64■□□□□ 0.57
PMS1-204ENST00000409823 DUOX2Q9NRD8 1548 aa18.63■□□□□ 0.57
PMS1-204ENST00000409823 DHX29Q7Z478 1369 aaKnown RBP18.62■□□□□ 0.57
PMS1-204ENST00000409823 ZMYM4Q5VZL5 1548 aa18.62■□□□□ 0.57
PMS1-204ENST00000409823 A2MP01023 1474 aa18.61■□□□□ 0.57
PMS1-204ENST00000409823 DIP2CQ9Y2E4 1556 aa18.61■□□□□ 0.57
PMS1-204ENST00000409823 HRCP23327 699 aa18.59■□□□□ 0.57
PMS1-204ENST00000409823 GGT6Q6P531 493 aa18.59■□□□□ 0.57
PMS1-204ENST00000409823 ERBINQ96RT1 1412 aa18.59■□□□□ 0.57
PMS1-204ENST00000409823 NUP155O75694 1391 aa18.59■□□□□ 0.57
PMS1-204ENST00000409823 MAGI2Q86UL8 1455 aa18.58■□□□□ 0.57
PMS1-204ENST00000409823 DHX57Q6P158 1386 aaKnown RBP18.58■□□□□ 0.56
PMS1-204ENST00000409823 FOXD1Q16676 465 aa18.58■□□□□ 0.56
PMS1-204ENST00000409823 ATP10AO60312 1499 aa18.56■□□□□ 0.56
PMS1-204ENST00000409823 MLECQ14165 292 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms