RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 EFCAB5A4FU69 1503 aa9.38□□□□□ -0.91
SPTLC1P2-201ENST00000407089 ZMYM4Q5VZL5 1548 aa9.38□□□□□ -0.91
SPTLC1P2-201ENST00000407089 SETD1BQ9UPS6 1966 aaKnown RBP9.37□□□□□ -0.91
SPTLC1P2-201ENST00000407089 ATP10AO60312 1499 aa9.36□□□□□ -0.91
SPTLC1P2-201ENST00000407089 HSPA1LP34931 641 aa9.36□□□□□ -0.91
SPTLC1P2-201ENST00000407089 HECW1Q76N89 1606 aa9.35□□□□□ -0.91
SPTLC1P2-201ENST00000407089 PLEKHD1A6NEE1 506 aa9.35□□□□□ -0.91
SPTLC1P2-201ENST00000407089 CTTNBP2Q8WZ74 1663 aa9.35□□□□□ -0.91
SPTLC1P2-201ENST00000407089 ZNF335Q9H4Z2 1342 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1P2-201ENST00000407089 MED1Q15648 1581 aaPredicted RBP9.34□□□□□ -0.91
SPTLC1P2-201ENST00000407089 NCOA1Q15788 1441 aa9.33□□□□□ -0.92
SPTLC1P2-201ENST00000407089 C9orf84Q5VXU9 1444 aa9.32□□□□□ -0.92
SPTLC1P2-201ENST00000407089 SCAPERQ9BY12 1400 aa9.32□□□□□ -0.92
SPTLC1P2-201ENST00000407089 CFAP74Q9C0B2 1584 aa9.32□□□□□ -0.92
SPTLC1P2-201ENST00000407089 NCKAP5LQ9HCH0 1330 aa9.31□□□□□ -0.92
SPTLC1P2-201ENST00000407089 TRAPPC8Q9Y2L5 1435 aa9.31□□□□□ -0.92
SPTLC1P2-201ENST00000407089 PHF23Q9BUL5 403 aaPredicted RBP9.31□□□□□ -0.92
SPTLC1P2-201ENST00000407089 PIP4K2BP78356 416 aa9.3□□□□□ -0.92
SPTLC1P2-201ENST00000407089 RAPGEF6Q8TEU7 1601 aa9.3□□□□□ -0.92
SPTLC1P2-201ENST00000407089 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.3□□□□□ -0.92
SPTLC1P2-201ENST00000407089 NUP153P49790 1475 aaKnown RBP9.29□□□□□ -0.92
SPTLC1P2-201ENST00000407089 SCAF1Q9H7N4 1312 aaKnown RBP9.29□□□□□ -0.92
SPTLC1P2-201ENST00000407089 TOM1O60784 492 aa9.27□□□□□ -0.93
SPTLC1P2-201ENST00000407089 ESF1Q9H501 851 aaKnown RBP9.27□□□□□ -0.93
SPTLC1P2-201ENST00000407089 PLCH2O75038 1416 aa9.27□□□□□ -0.93
SPTLC1P2-201ENST00000407089 CAMSAP1Q5T5Y3 1602 aa9.27□□□□□ -0.93
SPTLC1P2-201ENST00000407089 C3P01024 1663 aa9.26□□□□□ -0.93
SPTLC1P2-201ENST00000407089 PKD2Q13563 968 aa9.26□□□□□ -0.93
SPTLC1P2-201ENST00000407089 EFCAB2Q5VUJ9 269 aa9.26□□□□□ -0.93
SPTLC1P2-201ENST00000407089 AFAP1Q8N556 730 aa9.26□□□□□ -0.93
SPTLC1P2-201ENST00000407089 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
SPTLC1P2-201ENST00000407089 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
SPTLC1P2-201ENST00000407089 MYT1LQ9UL68 1186 aa9.24□□□□□ -0.93
SPTLC1P2-201ENST00000407089 SAMD9Q5K651 1589 aa9.22□□□□□ -0.93
SPTLC1P2-201ENST00000407089 PPP6R1Q9UPN7 881 aa9.22□□□□□ -0.93
SPTLC1P2-201ENST00000407089 NPATQ14207 1427 aa9.21□□□□□ -0.94
SPTLC1P2-201ENST00000407089 CNTLNQ9NXG0 1405 aa9.21□□□□□ -0.94
SPTLC1P2-201ENST00000407089 ZNF518AQ6AHZ1 1483 aa9.21□□□□□ -0.94
SPTLC1P2-201ENST00000407089 ZMYM3Q14202 1370 aa9.2□□□□□ -0.94
SPTLC1P2-201ENST00000407089 TCOF1Q13428 1488 aaKnown RBP9.2□□□□□ -0.94
SPTLC1P2-201ENST00000407089 AGLP35573 1532 aa9.2□□□□□ -0.94
SPTLC1P2-201ENST00000407089 REREQ9P2R6 1566 aa9.2□□□□□ -0.94
SPTLC1P2-201ENST00000407089 RANGAP1P46060 587 aaPredicted RBP9.19□□□□□ -0.94
SPTLC1P2-201ENST00000407089 PLA2R1Q13018 1463 aa9.19□□□□□ -0.94
SPTLC1P2-201ENST00000407089 DIP2CQ9Y2E4 1556 aa9.19□□□□□ -0.94
SPTLC1P2-201ENST00000407089 KDM5CP41229 1560 aa9.18□□□□□ -0.94
SPTLC1P2-201ENST00000407089 MLH3Q9UHC1 1453 aa9.17□□□□□ -0.94
SPTLC1P2-201ENST00000407089 SENP3Q9H4L4 574 aaPredicted RBP9.17□□□□□ -0.94
SPTLC1P2-201ENST00000407089 PTPRKQ15262 1439 aa9.16□□□□□ -0.94
SPTLC1P2-201ENST00000407089 CPS1P31327 1500 aa9.15□□□□□ -0.94
SPTLC1P2-201ENST00000407089 SHANK2Q9UPX8 1470 aa9.15□□□□□ -0.94
SPTLC1P2-201ENST00000407089 POTEAQ6S8J7 498 aa9.15□□□□□ -0.94
SPTLC1P2-201ENST00000407089 ABCA6Q8N139 1617 aa9.15□□□□□ -0.94
SPTLC1P2-201ENST00000407089 ALKQ9UM73 1620 aa9.15□□□□□ -0.94
SPTLC1P2-201ENST00000407089 CDK13Q14004 1512 aaKnown RBP9.15□□□□□ -0.95
SPTLC1P2-201ENST00000407089 CEP170BQ9Y4F5 1589 aaPredicted RBP9.12□□□□□ -0.95
SPTLC1P2-201ENST00000407089 MYO5CQ9NQX4 1742 aa9.12□□□□□ -0.95
SPTLC1P2-201ENST00000407089 MROH2AA6NES4 1674 aa9.12□□□□□ -0.95
SPTLC1P2-201ENST00000407089 ARHGAP5Q13017 1502 aa9.11□□□□□ -0.95
SPTLC1P2-201ENST00000407089 ZNF142P52746 1687 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1P2-201ENST00000407089 CSRNP3Q8WYN3 585 aa9.11□□□□□ -0.95
SPTLC1P2-201ENST00000407089 CDK11AQ9UQ88 783 aaPredicted RBP9.11□□□□□ -0.95
SPTLC1P2-201ENST00000407089 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
SPTLC1P2-201ENST00000407089 ATP1B4Q9UN42 357 aaPredicted RBP9.1□□□□□ -0.95
SPTLC1P2-201ENST00000407089 SUPT6HQ7KZ85 1726 aaKnown RBP9.1□□□□□ -0.95
SPTLC1P2-201ENST00000407089 ANKLE2Q86XL3 938 aa9.08□□□□□ -0.96
SPTLC1P2-201ENST00000407089 KIDINS220Q9ULH0 1771 aa9.08□□□□□ -0.96
SPTLC1P2-201ENST00000407089 KIF14Q15058 1648 aa9.08□□□□□ -0.96
SPTLC1P2-201ENST00000407089 A2ML1A8K2U0 1454 aa9.08□□□□□ -0.96
SPTLC1P2-201ENST00000407089 VWDEQ8N2E2 1590 aa9.07□□□□□ -0.96
SPTLC1P2-201ENST00000407089 DNMT1P26358 1616 aaKnown RBP9.07□□□□□ -0.96
SPTLC1P2-201ENST00000407089 GGT6Q6P531 493 aa9.07□□□□□ -0.96
SPTLC1P2-201ENST00000407089 NEURL4Q96JN8 1562 aa9.07□□□□□ -0.96
SPTLC1P2-201ENST00000407089 CLTCQ00610 1675 aaKnown RBP9.07□□□□□ -0.96
SPTLC1P2-201ENST00000407089 UPF1Q92900 1129 aaKnown RBP eCLIP9.06□□□□□ -0.96
SPTLC1P2-201ENST00000407089 TROQ12816 1431 aaPredicted RBP9.05□□□□□ -0.96
SPTLC1P2-201ENST00000407089 LRRC7Q96NW7 1537 aa9.05□□□□□ -0.96
SPTLC1P2-201ENST00000407089 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 THEMISQ8N1K5 641 aaPredicted RBP9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 CDC42BPBQ9Y5S2 1711 aa9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 ABCC1P33527 1531 aa9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 SPAG9O60271 1321 aaKnown RBP9.04□□□□□ -0.96
SPTLC1P2-201ENST00000407089 NPHP4O75161 1426 aaPredicted RBP9.03□□□□□ -0.96
SPTLC1P2-201ENST00000407089 CLIP1P30622 1438 aa9.03□□□□□ -0.96
SPTLC1P2-201ENST00000407089 POLR1AO95602 1720 aaPredicted RBP9.02□□□□□ -0.96
SPTLC1P2-201ENST00000407089 MED14O60244 1454 aa9.02□□□□□ -0.96
SPTLC1P2-201ENST00000407089 ITSN2Q9NZM3 1697 aa9.02□□□□□ -0.97
SPTLC1P2-201ENST00000407089 HNRNPMP52272 730 aaKnown RBP eCLIP9.02□□□□□ -0.97
SPTLC1P2-201ENST00000407089 SAMD9LQ8IVG5 1584 aa9.02□□□□□ -0.97
SPTLC1P2-201ENST00000407089 TNRQ92752 1358 aa9.01□□□□□ -0.97
SPTLC1P2-201ENST00000407089 SETD1AO15047 1707 aaKnown RBP9.01□□□□□ -0.97
SPTLC1P2-201ENST00000407089 ZNF777Q9ULD5 760 aaPredicted RBP9.01□□□□□ -0.97
SPTLC1P2-201ENST00000407089 FAM135BQ49AJ0 1406 aa9□□□□□ -0.97
SPTLC1P2-201ENST00000407089 STRCP1A6NGW2 1772 aa9□□□□□ -0.97
SPTLC1P2-201ENST00000407089 A2MP01023 1474 aa9□□□□□ -0.97
SPTLC1P2-201ENST00000407089 RNF17Q9BXT8 1623 aaKnown RBP8.99□□□□□ -0.97
SPTLC1P2-201ENST00000407089 PLXNC1O60486 1568 aa8.99□□□□□ -0.97
SPTLC1P2-201ENST00000407089 PREX2Q70Z35 1606 aa8.98□□□□□ -0.97
SPTLC1P2-201ENST00000407089 FMN1Q68DA7 1419 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms