RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 NISCHQ9Y2I1 1504 aa13.97□□□□□ -0.17
SPTLC1P2-201ENST00000407089 ABCC9O60706 1549 aa13.24□□□□□ -0.29
SPTLC1P2-201ENST00000407089 DNAJC5BQ9UF47 199 aa12.97□□□□□ -0.33
SPTLC1P2-201ENST00000407089 CCDC180Q9P1Z9 1646 aa12.68□□□□□ -0.38
SPTLC1P2-201ENST00000407089 RB1CC1Q8TDY2 1594 aa12.35□□□□□ -0.43
SPTLC1P2-201ENST00000407089 PABPN1Q86U42 306 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPTLC1P2-201ENST00000407089 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SPTLC1P2-201ENST00000407089 NACADO15069 1562 aa12.15□□□□□ -0.46
SPTLC1P2-201ENST00000407089 DCAF8L2P0C7V8 631 aa12.08□□□□□ -0.48
SPTLC1P2-201ENST00000407089 BICRAQ9NZM4 1560 aa12.03□□□□□ -0.48
SPTLC1P2-201ENST00000407089 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
SPTLC1P2-201ENST00000407089 CECR2Q9BXF3 1484 aa11.98□□□□□ -0.49
SPTLC1P2-201ENST00000407089 CC2D2AQ9P2K1 1620 aa11.92□□□□□ -0.5
SPTLC1P2-201ENST00000407089 MYO15BQ96JP2 1530 aa11.82□□□□□ -0.52
SPTLC1P2-201ENST00000407089 SHROOM4Q9ULL8 1493 aa11.78□□□□□ -0.52
SPTLC1P2-201ENST00000407089 EIF4G1Q04637 1599 aaKnown RBP11.75□□□□□ -0.53
SPTLC1P2-201ENST00000407089 CUX2O14529 1486 aa11.6□□□□□ -0.55
SPTLC1P2-201ENST00000407089 SCRIBQ14160 1630 aa11.54□□□□□ -0.56
SPTLC1P2-201ENST00000407089 DCAF1Q9Y4B6 1507 aa11.49□□□□□ -0.57
SPTLC1P2-201ENST00000407089 TRIM41Q8WV44 630 aa11.48□□□□□ -0.57
SPTLC1P2-201ENST00000407089 ERCC6Q03468 1493 aa11.44□□□□□ -0.58
SPTLC1P2-201ENST00000407089 ZCCHC6Q5VYS8 1495 aaKnown RBP11.44□□□□□ -0.58
SPTLC1P2-201ENST00000407089 NCAPD3P42695 1498 aa11.27□□□□□ -0.6
SPTLC1P2-201ENST00000407089 NESP48681 1621 aa11.24□□□□□ -0.61
SPTLC1P2-201ENST00000407089 THOC2Q8NI27 1593 aaKnown RBP11.17□□□□□ -0.62
SPTLC1P2-201ENST00000407089 ATAD2BQ9ULI0 1458 aa11.15□□□□□ -0.62
SPTLC1P2-201ENST00000407089 HMGXB3Q12766 1538 aa11.08□□□□□ -0.64
SPTLC1P2-201ENST00000407089 SMARCA2P51531 1590 aa11.07□□□□□ -0.64
SPTLC1P2-201ENST00000407089 OSCARQ8IYS5 282 aa11.06□□□□□ -0.64
SPTLC1P2-201ENST00000407089 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
SPTLC1P2-201ENST00000407089 PDS5BQ9NTI5 1447 aa11.03□□□□□ -0.64
SPTLC1P2-201ENST00000407089 KIF21AQ7Z4S6 1674 aa11.01□□□□□ -0.65
SPTLC1P2-201ENST00000407089 BAZ1BQ9UIG0 1483 aaKnown RBP10.99□□□□□ -0.65
SPTLC1P2-201ENST00000407089 BAZ1AQ9NRL2 1556 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1P2-201ENST00000407089 SMARCA4P51532 1647 aa10.97□□□□□ -0.65
SPTLC1P2-201ENST00000407089 MRC2Q9UBG0 1479 aa10.94□□□□□ -0.66
SPTLC1P2-201ENST00000407089 AEBP2Q6ZN18 517 aaPredicted RBP10.92□□□□□ -0.66
SPTLC1P2-201ENST00000407089 WDR62O43379 1518 aa10.92□□□□□ -0.66
SPTLC1P2-201ENST00000407089 CADPSQ9ULU8 1353 aa10.9□□□□□ -0.66
SPTLC1P2-201ENST00000407089 RIMBP3CA6NJZ7 1639 aa10.89□□□□□ -0.67
SPTLC1P2-201ENST00000407089 RIMBP3BA6NNM3 1639 aa10.89□□□□□ -0.67
SPTLC1P2-201ENST00000407089 RIMBP3Q9UFD9 1639 aa10.89□□□□□ -0.67
SPTLC1P2-201ENST00000407089 PEG3Q9GZU2 1588 aa10.87□□□□□ -0.67
SPTLC1P2-201ENST00000407089 TRHP20396 242 aaPredicted RBP10.87□□□□□ -0.67
SPTLC1P2-201ENST00000407089 CYB5RLQ6IPT4 315 aa10.84□□□□□ -0.67
SPTLC1P2-201ENST00000407089 ARHGEF11O15085 1522 aa10.81□□□□□ -0.68
SPTLC1P2-201ENST00000407089 CEP164Q9UPV0 1460 aa10.79□□□□□ -0.68
SPTLC1P2-201ENST00000407089 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
SPTLC1P2-201ENST00000407089 FANCD2Q9BXW9 1451 aa10.75□□□□□ -0.69
SPTLC1P2-201ENST00000407089 URB2Q14146 1524 aaKnown RBP10.7□□□□□ -0.7
SPTLC1P2-201ENST00000407089 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
SPTLC1P2-201ENST00000407089 ZNF608Q9ULD9 1512 aaPredicted RBP10.66□□□□□ -0.7
SPTLC1P2-201ENST00000407089 CFTRP13569 1480 aa10.66□□□□□ -0.7
SPTLC1P2-201ENST00000407089 IFT140Q96RY7 1462 aa10.61□□□□□ -0.71
SPTLC1P2-201ENST00000407089 WIZO95785 1651 aa10.59□□□□□ -0.71
SPTLC1P2-201ENST00000407089 RSF1Q96T23 1441 aaPredicted RBP10.58□□□□□ -0.72
SPTLC1P2-201ENST00000407089 FBLN2P98095 1184 aa10.57□□□□□ -0.72
SPTLC1P2-201ENST00000407089 ILDR1Q86SU0 546 aaPredicted RBP10.55□□□□□ -0.72
SPTLC1P2-201ENST00000407089 CHD1O14646 1710 aa10.53□□□□□ -0.72
SPTLC1P2-201ENST00000407089 AQRO60306 1485 aaKnown RBP eCLIP10.52□□□□□ -0.73
SPTLC1P2-201ENST00000407089 EIF4G3O43432 1585 aaKnown RBP10.52□□□□□ -0.73
SPTLC1P2-201ENST00000407089 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
SPTLC1P2-201ENST00000407089 ABCC8Q09428 1581 aa10.43□□□□□ -0.74
SPTLC1P2-201ENST00000407089 CLASP1Q7Z460 1538 aa10.43□□□□□ -0.74
SPTLC1P2-201ENST00000407089 TARBP1Q13395 1621 aaKnown RBP10.42□□□□□ -0.74
SPTLC1P2-201ENST00000407089 CHMP7Q8WUX9 453 aaPredicted RBP10.41□□□□□ -0.74
SPTLC1P2-201ENST00000407089 TOP2AP11388 1531 aaKnown RBP10.4□□□□□ -0.74
SPTLC1P2-201ENST00000407089 PRDM2Q13029 1718 aa10.4□□□□□ -0.74
SPTLC1P2-201ENST00000407089 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
SPTLC1P2-201ENST00000407089 GAPVD1Q14C86 1478 aa10.38□□□□□ -0.75
SPTLC1P2-201ENST00000407089 DNMBPQ6XZF7 1577 aa10.38□□□□□ -0.75
SPTLC1P2-201ENST00000407089 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
SPTLC1P2-201ENST00000407089 POLA1P09884 1462 aaPredicted RBP10.36□□□□□ -0.75
SPTLC1P2-201ENST00000407089 SNAPC4Q5SXM2 1469 aa10.36□□□□□ -0.75
SPTLC1P2-201ENST00000407089 KDM4FA0A1W2PPD8 638 aa10.35□□□□□ -0.75
SPTLC1P2-201ENST00000407089 CCDC88BA6NC98 1476 aa10.35□□□□□ -0.75
SPTLC1P2-201ENST00000407089 RAD54L2Q9Y4B4 1467 aa10.35□□□□□ -0.75
SPTLC1P2-201ENST00000407089 SOGA1O94964 1423 aa10.33□□□□□ -0.76
SPTLC1P2-201ENST00000407089 MAGI1Q96QZ7 1491 aaPredicted RBP10.3□□□□□ -0.76
SPTLC1P2-201ENST00000407089 SYNJ2O15056 1496 aa10.29□□□□□ -0.76
SPTLC1P2-201ENST00000407089 GRIN2BQ13224 1484 aa10.27□□□□□ -0.77
SPTLC1P2-201ENST00000407089 ERCC6L2Q5T890 1561 aa10.25□□□□□ -0.77
SPTLC1P2-201ENST00000407089 WDR97A6NE52 1622 aa10.24□□□□□ -0.77
SPTLC1P2-201ENST00000407089 KIF13AQ9H1H9 1805 aa10.23□□□□□ -0.77
SPTLC1P2-201ENST00000407089 FAM69CQ0P6D2 419 aa10.23□□□□□ -0.77
SPTLC1P2-201ENST00000407089 FGD5Q6ZNL6 1462 aa10.21□□□□□ -0.78
SPTLC1P2-201ENST00000407089 CEP170Q5SW79 1584 aa10.17□□□□□ -0.78
SPTLC1P2-201ENST00000407089 ABCC10Q5T3U5 1492 aa10.17□□□□□ -0.78
SPTLC1P2-201ENST00000407089 GRIN2AQ12879 1464 aa10.13□□□□□ -0.79
SPTLC1P2-201ENST00000407089 NPM1P06748 294 aaKnown RBP eCLIP10.13□□□□□ -0.79
SPTLC1P2-201ENST00000407089 KDM6BO15054 1643 aa10.13□□□□□ -0.79
SPTLC1P2-201ENST00000407089 CUX1P39880 1505 aa10.12□□□□□ -0.79
SPTLC1P2-201ENST00000407089 PBRM1Q86U86 1689 aa10.12□□□□□ -0.79
SPTLC1P2-201ENST00000407089 FBXO41Q8TF61 875 aa10.12□□□□□ -0.79
SPTLC1P2-201ENST00000407089 NUP160Q12769 1436 aa10.12□□□□□ -0.79
SPTLC1P2-201ENST00000407089 SHROOM2Q13796 1616 aa10.11□□□□□ -0.79
SPTLC1P2-201ENST00000407089 PRG4Q92954 1404 aaPredicted RBP10.09□□□□□ -0.79
SPTLC1P2-201ENST00000407089 HECW2Q9P2P5 1572 aa10.09□□□□□ -0.79
SPTLC1P2-201ENST00000407089 JPH4Q96JJ6 628 aa10.08□□□□□ -0.8
SPTLC1P2-201ENST00000407089 DIP2BQ9P265 1576 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms