RNA–Protein interactions for RNA: ENST00000406961.5

NCOA1-205, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene NCOA1, Length 7,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-205ENST00000406961 JPH4Q96JJ6 628 aa20.8■□□□□ 0.92
NCOA1-205ENST00000406961 PNNQ9H307 717 aaKnown RBP20.79■□□□□ 0.92
NCOA1-205ENST00000406961 KTN1Q86UP2 1357 aaKnown RBP20.77■□□□□ 0.92
NCOA1-205ENST00000406961 STK26Q9P289 416 aa20.76■□□□□ 0.91
NCOA1-205ENST00000406961 KIF3BO15066 747 aa20.74■□□□□ 0.91
NCOA1-205ENST00000406961 RGS3P49796 1198 aa20.73■□□□□ 0.91
NCOA1-205ENST00000406961 L3MBTL2Q969R5 705 aa20.73■□□□□ 0.91
NCOA1-205ENST00000406961 RSPH4AQ5TD94 716 aa20.73■□□□□ 0.91
NCOA1-205ENST00000406961 MS4A1P11836 297 aa20.72■□□□□ 0.91
NCOA1-205ENST00000406961 CASC1Q6TDU7 716 aa20.72■□□□□ 0.91
NCOA1-205ENST00000406961 B4GALNT3Q6L9W6 998 aa20.7■□□□□ 0.9
NCOA1-205ENST00000406961 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
NCOA1-205ENST00000406961 CHMP4BQ9H444 224 aaKnown RBP20.7■□□□□ 0.9
NCOA1-205ENST00000406961 SOX12O15370 315 aa20.69■□□□□ 0.9
NCOA1-205ENST00000406961 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
NCOA1-205ENST00000406961 FGD5Q6ZNL6 1462 aa20.68■□□□□ 0.9
NCOA1-205ENST00000406961 RALBP1Q15311 655 aa20.67■□□□□ 0.9
NCOA1-205ENST00000406961 IGF1RP08069 1367 aa20.65■□□□□ 0.9
NCOA1-205ENST00000406961 EIF3AQ14152 1382 aaKnown RBP20.65■□□□□ 0.9
NCOA1-205ENST00000406961 EIF5BO60841 1220 aaKnown RBP20.64■□□□□ 0.9
NCOA1-205ENST00000406961 DHX57Q6P158 1386 aaKnown RBP20.64■□□□□ 0.89
NCOA1-205ENST00000406961 NCLP19338 710 aaKnown RBP20.63■□□□□ 0.89
NCOA1-205ENST00000406961 GOLGA6L22H0YM25 854 aa20.62■□□□□ 0.89
NCOA1-205ENST00000406961 RAD54L2Q9Y4B4 1467 aa20.62■□□□□ 0.89
NCOA1-205ENST00000406961 PTPRGP23470 1445 aa20.61■□□□□ 0.89
NCOA1-205ENST00000406961 GAPVD1Q14C86 1478 aa20.6■□□□□ 0.89
NCOA1-205ENST00000406961 WASHC2CQ9Y4E1 1318 aa20.59■□□□□ 0.89
NCOA1-205ENST00000406961 NCAPD3P42695 1498 aa20.59■□□□□ 0.89
NCOA1-205ENST00000406961 ANP32EQ9BTT0 268 aa20.56■□□□□ 0.88
NCOA1-205ENST00000406961 OS9Q13438 667 aaPredicted RBP20.56■□□□□ 0.88
NCOA1-205ENST00000406961 U2AF1L5P0DN76 240 aaPredicted RBP20.56■□□□□ 0.88
NCOA1-205ENST00000406961 U2AF1Q01081 240 aaKnown RBP eCLIP20.56■□□□□ 0.886e-8■■■■■ 27.5
NCOA1-205ENST00000406961 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
NCOA1-205ENST00000406961 RTF1Q92541 710 aaKnown RBP20.53■□□□□ 0.88
NCOA1-205ENST00000406961 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
NCOA1-205ENST00000406961 RCAN3Q9UKA8 241 aa20.51■□□□□ 0.87
NCOA1-205ENST00000406961 PAK3O75914 559 aaPredicted RBP20.49■□□□□ 0.87
NCOA1-205ENST00000406961 NOP58Q9Y2X3 529 aaKnown RBP20.49■□□□□ 0.87
NCOA1-205ENST00000406961 TERF2IPQ9NYB0 399 aa20.48■□□□□ 0.87
NCOA1-205ENST00000406961 IPO8O15397 1037 aaKnown RBP20.46■□□□□ 0.87
NCOA1-205ENST00000406961 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
NCOA1-205ENST00000406961 KIF21BO75037 1637 aa20.45■□□□□ 0.86
NCOA1-205ENST00000406961 CALD1Q05682 793 aaKnown RBP20.45■□□□□ 0.86
NCOA1-205ENST00000406961 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
NCOA1-205ENST00000406961 ERICH6BQ5W0A0 696 aa20.45■□□□□ 0.86
NCOA1-205ENST00000406961 AQRO60306 1485 aaKnown RBP eCLIP20.44■□□□□ 0.868e-7■■■■■ 28.7
NCOA1-205ENST00000406961 HSP90AB1P08238 724 aaKnown RBP20.44■□□□□ 0.86
NCOA1-205ENST00000406961 TRIM44Q96DX7 344 aaPredicted RBP20.44■□□□□ 0.86
NCOA1-205ENST00000406961 TRAK1Q9UPV9 953 aa20.43■□□□□ 0.86
NCOA1-205ENST00000406961 TPRNQ4KMQ1 711 aa20.43■□□□□ 0.86
NCOA1-205ENST00000406961 EID1Q9Y6B2 187 aa20.42■□□□□ 0.86
NCOA1-205ENST00000406961 KIF15Q9NS87 1388 aa20.42■□□□□ 0.86
NCOA1-205ENST00000406961 NPHP1O15259 732 aa20.41■□□□□ 0.86
NCOA1-205ENST00000406961 FGD6Q6ZV73 1430 aa20.41■□□□□ 0.86
NCOA1-205ENST00000406961 MYOM3Q5VTT5 1437 aa20.4■□□□□ 0.86
NCOA1-205ENST00000406961 CCDC146Q8IYE0 955 aa20.4■□□□□ 0.86
NCOA1-205ENST00000406961 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
NCOA1-205ENST00000406961 KCNJ4P48050 445 aa20.39■□□□□ 0.85
NCOA1-205ENST00000406961 GOLGA2Q08379 1002 aa20.39■□□□□ 0.85
NCOA1-205ENST00000406961 ITPRIPQ8IWB1 547 aa20.39■□□□□ 0.85
NCOA1-205ENST00000406961 CUX1P39880 1505 aa20.38■□□□□ 0.85
NCOA1-205ENST00000406961 PANK3Q9H999 370 aa20.38■□□□□ 0.85
NCOA1-205ENST00000406961 MYBBP1AQ9BQG0 1328 aaKnown RBP20.37■□□□□ 0.85
NCOA1-205ENST00000406961 ZRSR1Q15695 479 aaKnown RBP20.37■□□□□ 0.85
NCOA1-205ENST00000406961 OSCARQ8IYS5 282 aa20.37■□□□□ 0.85
NCOA1-205ENST00000406961 PHLDB1Q86UU1 1377 aa20.37■□□□□ 0.85
NCOA1-205ENST00000406961 HSCBQ8IWL3 235 aa20.36■□□□□ 0.85
NCOA1-205ENST00000406961 CSB-PGBD3P0DP91 1061 aa20.36■□□□□ 0.85
NCOA1-205ENST00000406961 LRRC9Q6ZRR7 1453 aa20.35■□□□□ 0.85
NCOA1-205ENST00000406961 RWDD1Q9H446 243 aaPredicted RBP20.35■□□□□ 0.85
NCOA1-205ENST00000406961 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
NCOA1-205ENST00000406961 USP47Q96K76 1375 aa20.35■□□□□ 0.85
NCOA1-205ENST00000406961 FGD1P98174 961 aa20.35■□□□□ 0.85
NCOA1-205ENST00000406961 CFTRP13569 1480 aa20.34■□□□□ 0.85
NCOA1-205ENST00000406961 PDE3BQ13370 1112 aa20.34■□□□□ 0.85
NCOA1-205ENST00000406961 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.34■□□□□ 0.85
NCOA1-205ENST00000406961 APBB1O00213 710 aa20.34■□□□□ 0.85
NCOA1-205ENST00000406961 RBM19Q9Y4C8 960 aaKnown RBP20.34■□□□□ 0.85
NCOA1-205ENST00000406961 CASKIN1Q8WXD9 1431 aa20.33■□□□□ 0.85
NCOA1-205ENST00000406961 CYB5RLQ6IPT4 315 aa20.33■□□□□ 0.85
NCOA1-205ENST00000406961 NGDNQ8NEJ9 315 aaKnown RBP20.33■□□□□ 0.84
NCOA1-205ENST00000406961 PTMAP06454 111 aaKnown RBP20.32■□□□□ 0.84
NCOA1-205ENST00000406961 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
NCOA1-205ENST00000406961 SYNJ1O43426 1573 aa20.31■□□□□ 0.84
NCOA1-205ENST00000406961 SMC4Q9NTJ3 1288 aa20.31■□□□□ 0.84
NCOA1-205ENST00000406961 MCCP23508 829 aa20.3■□□□□ 0.84
NCOA1-205ENST00000406961 CFAP44Q96MT7 982 aa20.3■□□□□ 0.84
NCOA1-205ENST00000406961 TAOK2Q9UL54 1235 aa20.3■□□□□ 0.84
NCOA1-205ENST00000406961 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
NCOA1-205ENST00000406961 GRIN2BQ13224 1484 aa20.29■□□□□ 0.84
NCOA1-205ENST00000406961 CDK11BP21127 795 aaKnown RBP20.29■□□□□ 0.84
NCOA1-205ENST00000406961 ERICH3Q5RHP9 1530 aa20.29■□□□□ 0.84
NCOA1-205ENST00000406961 NUTM2FA1L443 756 aa20.28■□□□□ 0.84
NCOA1-205ENST00000406961 NCOA2Q15596 1464 aa20.28■□□□□ 0.84
NCOA1-205ENST00000406961 NAP1L2Q9ULW6 460 aaPredicted RBP20.28■□□□□ 0.84
NCOA1-205ENST00000406961 CENPJQ9HC77 1338 aaPredicted RBP20.28■□□□□ 0.84
NCOA1-205ENST00000406961 TCERG1O14776 1098 aaKnown RBP20.27■□□□□ 0.84
NCOA1-205ENST00000406961 FYCO1Q9BQS8 1478 aa20.27■□□□□ 0.84
NCOA1-205ENST00000406961 PMFBP1Q8TBY8 1022 aa20.27■□□□□ 0.84
NCOA1-205ENST00000406961 STK31Q9BXU1 1019 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms