RNA–Protein interactions for RNA: ENST00000404049.7

KDM5C-205, Transcript of lysine demethylase 5C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KDM5C, Length 5,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-205ENST00000404049 IPO9Q96P70 1041 aaKnown RBP19.38■□□□□ 0.69
KDM5C-205ENST00000404049 ARID3AQ99856 593 aa19.38■□□□□ 0.69
KDM5C-205ENST00000404049 MCCP23508 829 aa19.37■□□□□ 0.69
KDM5C-205ENST00000404049 GBP4Q96PP9 640 aa19.37■□□□□ 0.69
KDM5C-205ENST00000404049 SLKQ9H2G2 1235 aaPredicted RBP19.36■□□□□ 0.69
KDM5C-205ENST00000404049 CFAP44Q96MT7 982 aa19.34■□□□□ 0.69
KDM5C-205ENST00000404049 RCAN3Q9UKA8 241 aa19.34■□□□□ 0.69
KDM5C-205ENST00000404049 DCAF11Q8TEB1 546 aa19.32■□□□□ 0.68
KDM5C-205ENST00000404049 SETD5Q9C0A6 1442 aa19.32■□□□□ 0.68
KDM5C-205ENST00000404049 GOLGA6L3A6NEY3 463 aa19.32■□□□□ 0.68
KDM5C-205ENST00000404049 GOLGA6L1Q8N7Z2 621 aa19.32■□□□□ 0.68
KDM5C-205ENST00000404049 KANK1Q14678 1352 aa19.31■□□□□ 0.68
KDM5C-205ENST00000404049 NPHP1O15259 732 aa19.29■□□□□ 0.68
KDM5C-205ENST00000404049 KTN1Q86UP2 1357 aaKnown RBP19.29■□□□□ 0.68
KDM5C-205ENST00000404049 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
KDM5C-205ENST00000404049 ERCC6Q03468 1493 aa19.28■□□□□ 0.68
KDM5C-205ENST00000404049 BAZ1AQ9NRL2 1556 aaPredicted RBP19.28■□□□□ 0.68
KDM5C-205ENST00000404049 HSP90AA2PQ14568 343 aaPredicted RBP19.27■□□□□ 0.67
KDM5C-205ENST00000404049 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.67
KDM5C-205ENST00000404049 LMOD2Q6P5Q4 547 aa19.26■□□□□ 0.67
KDM5C-205ENST00000404049 SETQ01105 290 aaPredicted RBP19.25■□□□□ 0.67
KDM5C-205ENST00000404049 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
KDM5C-205ENST00000404049 RSPH6AQ9H0K4 717 aa19.25■□□□□ 0.67
KDM5C-205ENST00000404049 RWDD1Q9H446 243 aaPredicted RBP19.24■□□□□ 0.67
KDM5C-205ENST00000404049 SYAP1Q96A49 352 aaPredicted RBP19.24■□□□□ 0.67
KDM5C-205ENST00000404049 EIF4G1Q04637 1599 aaKnown RBP19.23■□□□□ 0.67
KDM5C-205ENST00000404049 CALRP27797 417 aaKnown RBP19.23■□□□□ 0.67
KDM5C-205ENST00000404049 CARMIL1Q5VZK9 1371 aa19.21■□□□□ 0.67
KDM5C-205ENST00000404049 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
KDM5C-205ENST00000404049 APBB1O00213 710 aa19.21■□□□□ 0.67
KDM5C-205ENST00000404049 MFAP1P55081 439 aaKnown RBP19.21■□□□□ 0.67
KDM5C-205ENST00000404049 ITPRIPQ8IWB1 547 aa19.2■□□□□ 0.66
KDM5C-205ENST00000404049 IPO8O15397 1037 aaKnown RBP19.19■□□□□ 0.66
KDM5C-205ENST00000404049 RALBP1Q15311 655 aa19.19■□□□□ 0.66
KDM5C-205ENST00000404049 CUX2O14529 1486 aa19.18■□□□□ 0.66
KDM5C-205ENST00000404049 PMFBP1Q8TBY8 1022 aa19.18■□□□□ 0.66
KDM5C-205ENST00000404049 ARHGAP35Q9NRY4 1499 aa19.17■□□□□ 0.66
KDM5C-205ENST00000404049 HTATSF1O43719 755 aaKnown RBP19.17■□□□□ 0.66
KDM5C-205ENST00000404049 TPM4P67936 248 aa19.17■□□□□ 0.66
KDM5C-205ENST00000404049 SOGA1O94964 1423 aa19.16■□□□□ 0.66
KDM5C-205ENST00000404049 SRPK2P78362 688 aaKnown RBP19.16■□□□□ 0.66
KDM5C-205ENST00000404049 VSIG10Q8N0Z9 540 aa19.15■□□□□ 0.66
KDM5C-205ENST00000404049 GOLGA2Q08379 1002 aa19.15■□□□□ 0.66
KDM5C-205ENST00000404049 FOXD1Q16676 465 aa19.15■□□□□ 0.66
KDM5C-205ENST00000404049 RAB3GAP2Q9H2M9 1393 aa19.15■□□□□ 0.66
KDM5C-205ENST00000404049 VPS8Q8N3P4 1428 aa19.15■□□□□ 0.66
KDM5C-205ENST00000404049 KIAA1211Q6ZU35 1233 aa19.14■□□□□ 0.66
KDM5C-205ENST00000404049 A0A0U1RQG5 324 aaPredicted RBP19.14■□□□□ 0.65
KDM5C-205ENST00000404049 GNL2Q13823 731 aaKnown RBP19.13■□□□□ 0.65
KDM5C-205ENST00000404049 FOXD4L1Q9NU39 408 aa19.11■□□□□ 0.65
KDM5C-205ENST00000404049 CLSTN1O94985 981 aa19.11■□□□□ 0.65
KDM5C-205ENST00000404049 CALD1Q05682 793 aaKnown RBP19.11■□□□□ 0.65
KDM5C-205ENST00000404049 KANK4Q5T7N3 995 aaPredicted RBP19.11■□□□□ 0.65
KDM5C-205ENST00000404049 ROCK2O75116 1388 aaKnown RBP19.09■□□□□ 0.65
KDM5C-205ENST00000404049 PKD2Q13563 968 aa19.08■□□□□ 0.65
KDM5C-205ENST00000404049 RTF1Q92541 710 aaKnown RBP19.08■□□□□ 0.64
KDM5C-205ENST00000404049 GSE1Q14687 1217 aa19.07■□□□□ 0.64
KDM5C-205ENST00000404049 HDGFL2Q7Z4V5 671 aaPredicted RBP19.07■□□□□ 0.64
KDM5C-205ENST00000404049 SOX12O15370 315 aa19.06■□□□□ 0.64
KDM5C-205ENST00000404049 U2AF1L5P0DN76 240 aaPredicted RBP19.05■□□□□ 0.64
KDM5C-205ENST00000404049 U2AF1Q01081 240 aaKnown RBP eCLIP19.05■□□□□ 0.64
KDM5C-205ENST00000404049 SAFB2Q14151 953 aaKnown RBP eCLIP19.05■□□□□ 0.64
KDM5C-205ENST00000404049 DDX11L8A8MPP1 907 aa19.04■□□□□ 0.64
KDM5C-205ENST00000404049 CSPP1Q1MSJ5 1256 aa19.04■□□□□ 0.64
KDM5C-205ENST00000404049 MPHOSPH9Q99550 1183 aa19.03■□□□□ 0.64
KDM5C-205ENST00000404049 SLC4A3P48751 1232 aa19.03■□□□□ 0.64
KDM5C-205ENST00000404049 PDE4AP27815 886 aa19.03■□□□□ 0.64
KDM5C-205ENST00000404049 CARMIL2Q6F5E8 1435 aa19.02■□□□□ 0.64
KDM5C-205ENST00000404049 CCDC34Q96HJ3 373 aa19.02■□□□□ 0.64
KDM5C-205ENST00000404049 SMC4Q9NTJ3 1288 aa19.02■□□□□ 0.64
KDM5C-205ENST00000404049 NCBP3Q53F19 620 aaKnown RBP19.02■□□□□ 0.64
KDM5C-205ENST00000404049 PDE3BQ13370 1112 aa19.02■□□□□ 0.64
KDM5C-205ENST00000404049 CECR2Q9BXF3 1484 aa19.01■□□□□ 0.63
KDM5C-205ENST00000404049 PHF14O94880 888 aa19.01■□□□□ 0.63
KDM5C-205ENST00000404049 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
KDM5C-205ENST00000404049 MLECQ14165 292 aa19■□□□□ 0.63
KDM5C-205ENST00000404049 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
KDM5C-205ENST00000404049 FANCIQ9NVI1 1328 aa19■□□□□ 0.63
KDM5C-205ENST00000404049 CENPJQ9HC77 1338 aaPredicted RBP19■□□□□ 0.63
KDM5C-205ENST00000404049 CLUAP1Q96AJ1 413 aa18.99■□□□□ 0.63
KDM5C-205ENST00000404049 GPS2Q13227 327 aa18.99■□□□□ 0.63
KDM5C-205ENST00000404049 HSP90B1P14625 803 aaKnown RBP18.99■□□□□ 0.63
KDM5C-205ENST00000404049 ZNF771Q7L3S4 317 aaPredicted RBP18.99■□□□□ 0.63
KDM5C-205ENST00000404049 TPM3P06753 285 aa18.98■□□□□ 0.63
KDM5C-205ENST00000404049 FAM161AQ3B820 660 aa18.98■□□□□ 0.63
KDM5C-205ENST00000404049 TRIM6-TRIM34B2RNG4 842 aa18.98■□□□□ 0.63
KDM5C-205ENST00000404049 GGT6Q6P531 493 aa18.98■□□□□ 0.63
KDM5C-205ENST00000404049 EIF3AQ14152 1382 aaKnown RBP18.97■□□□□ 0.63
KDM5C-205ENST00000404049 FMN1Q68DA7 1419 aa18.97■□□□□ 0.63
KDM5C-205ENST00000404049 FOXD4L5Q5VV16 416 aaPredicted RBP18.96■□□□□ 0.63
KDM5C-205ENST00000404049 FOXD4L4Q8WXT5 416 aaPredicted RBP18.96■□□□□ 0.63
KDM5C-205ENST00000404049 STK26Q9P289 416 aa18.96■□□□□ 0.63
KDM5C-205ENST00000404049 CENPQQ7L2Z9 268 aaPredicted RBP18.96■□□□□ 0.63
KDM5C-205ENST00000404049 ANKRD30AQ9BXX3 1397 aa18.96■□□□□ 0.63
KDM5C-205ENST00000404049 NLRP13Q86W25 1043 aa18.95■□□□□ 0.62
KDM5C-205ENST00000404049 ISY1Q9ULR0 285 aaKnown RBP18.95■□□□□ 0.62
KDM5C-205ENST00000404049 ST18O60284 1047 aa18.94■□□□□ 0.62
KDM5C-205ENST00000404049 NUP155O75694 1391 aa18.93■□□□□ 0.62
KDM5C-205ENST00000404049 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
KDM5C-205ENST00000404049 CHMP4AQ9BY43 222 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms