RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 SYNJ1O43426 1573 aa19.37■□□□□ 0.69
ITSN1-210ENST00000399353 CNTLNQ9NXG0 1405 aa19.37■□□□□ 0.69
ITSN1-210ENST00000399353 KIF7Q2M1P5 1343 aa19.36■□□□□ 0.69
ITSN1-210ENST00000399353 CCDC7Q96M83 1385 aa19.36■□□□□ 0.69
ITSN1-210ENST00000399353 TRIM44Q96DX7 344 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-210ENST00000399353 RRAGDQ9NQL2 400 aaPredicted RBP19.35■□□□□ 0.69
ITSN1-210ENST00000399353 L1TD1Q5T7N2 865 aaKnown RBP19.33■□□□□ 0.69
ITSN1-210ENST00000399353 SMG6Q86US8 1419 aaKnown RBP19.32■□□□□ 0.68
ITSN1-210ENST00000399353 FBLN2P98095 1184 aa19.32■□□□□ 0.68
ITSN1-210ENST00000399353 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
ITSN1-210ENST00000399353 BECN1Q14457 450 aa19.31■□□□□ 0.68
ITSN1-210ENST00000399353 GOLGA6L3A6NEY3 463 aa19.29■□□□□ 0.68
ITSN1-210ENST00000399353 ARHGAP35Q9NRY4 1499 aa19.29■□□□□ 0.68
ITSN1-210ENST00000399353 FHOD3Q2V2M9 1422 aa19.28■□□□□ 0.68
ITSN1-210ENST00000399353 FAM161AQ3B820 660 aa19.27■□□□□ 0.68
ITSN1-210ENST00000399353 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
ITSN1-210ENST00000399353 FHAD1B1AJZ9 1412 aa19.27■□□□□ 0.67
ITSN1-210ENST00000399353 MPHOSPH9Q99550 1183 aa19.26■□□□□ 0.67
ITSN1-210ENST00000399353 NBPF8Q3BBV2 869 aa19.26■□□□□ 0.67
ITSN1-210ENST00000399353 UPF2Q9HAU5 1272 aaKnown RBP19.25■□□□□ 0.67
ITSN1-210ENST00000399353 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
ITSN1-210ENST00000399353 PNISRQ8TF01 805 aaKnown RBP19.24■□□□□ 0.67
ITSN1-210ENST00000399353 CCDC18Q5T9S5 1454 aa19.23■□□□□ 0.67
ITSN1-210ENST00000399353 ZBTB7CA1YPR0 619 aa19.23■□□□□ 0.67
ITSN1-210ENST00000399353 ATAD2BQ9ULI0 1458 aa19.22■□□□□ 0.67
ITSN1-210ENST00000399353 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
ITSN1-210ENST00000399353 PANK2Q9BZ23 570 aa19.2■□□□□ 0.66
ITSN1-210ENST00000399353 RGL3Q3MIN7 710 aa19.2■□□□□ 0.66
ITSN1-210ENST00000399353 CARD11Q9BXL7 1154 aa19.2■□□□□ 0.66
ITSN1-210ENST00000399353 MYH16Q9H6N6 1097 aa19.19■□□□□ 0.66
ITSN1-210ENST00000399353 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.17■□□□□ 0.661e-6■■■■□ 23.9
ITSN1-210ENST00000399353 RBM10P98175 930 aaKnown RBP19.17■□□□□ 0.66
ITSN1-210ENST00000399353 RRP9O43818 475 aaKnown RBP19.17■□□□□ 0.66
ITSN1-210ENST00000399353 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.15■□□□□ 0.66
ITSN1-210ENST00000399353 LRRC9Q6ZRR7 1453 aa19.14■□□□□ 0.65
ITSN1-210ENST00000399353 AMER1Q5JTC6 1135 aaPredicted RBP19.13■□□□□ 0.65
ITSN1-210ENST00000399353 ANP32BQ92688 251 aaKnown RBP19.12■□□□□ 0.65
ITSN1-210ENST00000399353 FAM13BQ9NYF5 915 aa19.12■□□□□ 0.65
ITSN1-210ENST00000399353 UACAQ9BZF9 1416 aa19.11■□□□□ 0.65
ITSN1-210ENST00000399353 FMN1Q68DA7 1419 aa19.11■□□□□ 0.65
ITSN1-210ENST00000399353 CENPQQ7L2Z9 268 aaPredicted RBP19.11■□□□□ 0.65
ITSN1-210ENST00000399353 XRCC6P12956 609 aaKnown RBP eCLIP19.09■□□□□ 0.65
ITSN1-210ENST00000399353 WDR43Q15061 677 aaKnown RBP eCLIP19.09■□□□□ 0.65
ITSN1-210ENST00000399353 RNF123Q5XPI4 1314 aa19.08■□□□□ 0.65
ITSN1-210ENST00000399353 IGF1RP08069 1367 aa19.08■□□□□ 0.65
ITSN1-210ENST00000399353 PRXQ9BXM0 1461 aa19.07■□□□□ 0.64
ITSN1-210ENST00000399353 ST20-MTHFSA0A0A6YYL1 179 aa19.06■□□□□ 0.64
ITSN1-210ENST00000399353 NCLP19338 710 aaKnown RBP19.05■□□□□ 0.64
ITSN1-210ENST00000399353 KTN1Q86UP2 1357 aaKnown RBP19.05■□□□□ 0.64
ITSN1-210ENST00000399353 FOXD4L1Q9NU39 408 aa19.04■□□□□ 0.64
ITSN1-210ENST00000399353 MYBBP1AQ9BQG0 1328 aaKnown RBP19.03■□□□□ 0.64
ITSN1-210ENST00000399353 ESPNB1AK53 854 aa19.03■□□□□ 0.64
ITSN1-210ENST00000399353 PDE3BQ13370 1112 aa19.03■□□□□ 0.64
ITSN1-210ENST00000399353 CFDP1Q9UEE9 299 aaPredicted RBP19.03■□□□□ 0.64
ITSN1-210ENST00000399353 NEUROD2Q15784 382 aa19.03■□□□□ 0.64
ITSN1-210ENST00000399353 NLRP13Q86W25 1043 aa19.02■□□□□ 0.64
ITSN1-210ENST00000399353 C8orf34Q49A92 452 aa19.02■□□□□ 0.64
ITSN1-210ENST00000399353 AQRO60306 1485 aaKnown RBP eCLIP19.02■□□□□ 0.63
ITSN1-210ENST00000399353 TDRD9Q8NDG6 1382 aaKnown RBP19■□□□□ 0.63
ITSN1-210ENST00000399353 USP47Q96K76 1375 aa19■□□□□ 0.63
ITSN1-210ENST00000399353 PKD2Q13563 968 aa19■□□□□ 0.63
ITSN1-210ENST00000399353 TRAK2O60296 914 aa19■□□□□ 0.63
ITSN1-210ENST00000399353 NCOA1Q15788 1441 aa19■□□□□ 0.63
ITSN1-210ENST00000399353 MSNP26038 577 aaKnown RBP18.99■□□□□ 0.63
ITSN1-210ENST00000399353 RALBP1Q15311 655 aa18.99■□□□□ 0.63
ITSN1-210ENST00000399353 CLCN1P35523 988 aa18.99■□□□□ 0.63
ITSN1-210ENST00000399353 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
ITSN1-210ENST00000399353 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
ITSN1-210ENST00000399353 MFAP1P55081 439 aaKnown RBP18.98■□□□□ 0.63
ITSN1-210ENST00000399353 KIAA1211Q6ZU35 1233 aa18.98■□□□□ 0.63
ITSN1-210ENST00000399353 CCDC146Q8IYE0 955 aa18.98■□□□□ 0.63
ITSN1-210ENST00000399353 SEC24BO95487 1268 aa18.97■□□□□ 0.63
ITSN1-210ENST00000399353 FGD6Q6ZV73 1430 aa18.97■□□□□ 0.63
ITSN1-210ENST00000399353 PRDM10Q9NQV6 1147 aa18.96■□□□□ 0.63
ITSN1-210ENST00000399353 COG6Q9Y2V7 657 aa18.95■□□□□ 0.62
ITSN1-210ENST00000399353 R3HCC1Q9Y3T6 440 aaKnown RBP18.94■□□□□ 0.62
ITSN1-210ENST00000399353 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
ITSN1-210ENST00000399353 KIF15Q9NS87 1388 aa18.94■□□□□ 0.62
ITSN1-210ENST00000399353 MRE11P49959 708 aa18.94■□□□□ 0.62
ITSN1-210ENST00000399353 CLUAP1Q96AJ1 413 aa18.94■□□□□ 0.62
ITSN1-210ENST00000399353 TIAM1Q13009 1591 aa18.93■□□□□ 0.62
ITSN1-210ENST00000399353 PTPRKQ15262 1439 aa18.93■□□□□ 0.62
ITSN1-210ENST00000399353 MCM4P33991 863 aa18.93■□□□□ 0.62
ITSN1-210ENST00000399353 ZHX1Q9UKY1 873 aaPredicted RBP18.93■□□□□ 0.62
ITSN1-210ENST00000399353 GRPEL1Q9HAV7 217 aa18.92■□□□□ 0.62
ITSN1-210ENST00000399353 NAIPQ13075 1403 aa18.91■□□□□ 0.62
ITSN1-210ENST00000399353 DNTTIP2Q5QJE6 756 aaKnown RBP18.91■□□□□ 0.62
ITSN1-210ENST00000399353 GOLGA2Q08379 1002 aa18.9■□□□□ 0.62
ITSN1-210ENST00000399353 BCAR3O75815 825 aa18.89■□□□□ 0.61
ITSN1-210ENST00000399353 TPRNQ4KMQ1 711 aa18.89■□□□□ 0.61
ITSN1-210ENST00000399353 ADAMTS8Q9UP79 889 aa18.89■□□□□ 0.61
ITSN1-210ENST00000399353 HSCBQ8IWL3 235 aa18.89■□□□□ 0.61
ITSN1-210ENST00000399353 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
ITSN1-210ENST00000399353 MAP3K1Q13233 1512 aa18.88■□□□□ 0.61
ITSN1-210ENST00000399353 BCL2L13Q9BXK5 485 aa18.88■□□□□ 0.61
ITSN1-210ENST00000399353 HFM1A2PYH4 1435 aa18.88■□□□□ 0.61
ITSN1-210ENST00000399353 HSP90AB1P08238 724 aaKnown RBP18.88■□□□□ 0.61
ITSN1-210ENST00000399353 ZNF644Q9H582 1327 aaPredicted RBP18.88■□□□□ 0.61
ITSN1-210ENST00000399353 TOP2BQ02880 1626 aa18.88■□□□□ 0.61
ITSN1-210ENST00000399353 PANK1Q8TE04 598 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms