RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 MSH5O43196 834 aa19.09■□□□□ 0.65
RPRD1A-202ENST00000399022 HNRNPMP52272 730 aaKnown RBP eCLIP19.09■□□□□ 0.659e-6■■■■□ 22.2
RPRD1A-202ENST00000399022 TRIM44Q96DX7 344 aaPredicted RBP19.08■□□□□ 0.65
RPRD1A-202ENST00000399022 RRBP1Q9P2E9 1410 aaKnown RBP19.08■□□□□ 0.65
RPRD1A-202ENST00000399022 JPH4Q96JJ6 628 aa19.08■□□□□ 0.64
RPRD1A-202ENST00000399022 FGD6Q6ZV73 1430 aa19.07■□□□□ 0.64
RPRD1A-202ENST00000399022 KNSTRNQ9Y448 316 aa19.07■□□□□ 0.64
RPRD1A-202ENST00000399022 ZNF644Q9H582 1327 aaPredicted RBP19.06■□□□□ 0.64
RPRD1A-202ENST00000399022 CARMIL2Q6F5E8 1435 aa19.06■□□□□ 0.64
RPRD1A-202ENST00000399022 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
RPRD1A-202ENST00000399022 SLC24A1O60721 1099 aa19.03■□□□□ 0.64
RPRD1A-202ENST00000399022 IL27Q8NEV9 243 aa19.01■□□□□ 0.63
RPRD1A-202ENST00000399022 AQRO60306 1485 aaKnown RBP eCLIP19.01■□□□□ 0.63
RPRD1A-202ENST00000399022 ANKRD30AQ9BXX3 1397 aa19.01■□□□□ 0.63
RPRD1A-202ENST00000399022 TCERG1O14776 1098 aaKnown RBP19.01■□□□□ 0.63
RPRD1A-202ENST00000399022 HMGXB3Q12766 1538 aa19■□□□□ 0.63
RPRD1A-202ENST00000399022 ESF1Q9H501 851 aaKnown RBP18.99■□□□□ 0.63
RPRD1A-202ENST00000399022 UNC13AQ9UPW8 1703 aa18.99■□□□□ 0.63
RPRD1A-202ENST00000399022 PAK3O75914 559 aaPredicted RBP18.98■□□□□ 0.63
RPRD1A-202ENST00000399022 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
RPRD1A-202ENST00000399022 USP35Q9P2H5 1018 aa18.98■□□□□ 0.63
RPRD1A-202ENST00000399022 TNNT2P45379 298 aaPredicted RBP18.97■□□□□ 0.63
RPRD1A-202ENST00000399022 MYOM3Q5VTT5 1437 aa18.97■□□□□ 0.63
RPRD1A-202ENST00000399022 CASKIN1Q8WXD9 1431 aa18.97■□□□□ 0.63
RPRD1A-202ENST00000399022 ARID4BQ4LE39 1312 aaPredicted RBP18.97■□□□□ 0.63
RPRD1A-202ENST00000399022 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
RPRD1A-202ENST00000399022 NUDCQ9Y266 331 aa18.95■□□□□ 0.62
RPRD1A-202ENST00000399022 TMF1P82094 1093 aa18.94■□□□□ 0.62
RPRD1A-202ENST00000399022 POLA1P09884 1462 aaPredicted RBP18.93■□□□□ 0.62
RPRD1A-202ENST00000399022 NCOA2Q15596 1464 aa18.93■□□□□ 0.62
RPRD1A-202ENST00000399022 CDCA8Q53HL2 280 aa18.93■□□□□ 0.62
RPRD1A-202ENST00000399022 GSE1Q14687 1217 aa18.92■□□□□ 0.62
RPRD1A-202ENST00000399022 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
RPRD1A-202ENST00000399022 PRKRIP1Q9H875 184 aaPredicted RBP18.92■□□□□ 0.62
RPRD1A-202ENST00000399022 UACAQ9BZF9 1416 aa18.92■□□□□ 0.62
RPRD1A-202ENST00000399022 TOPBP1Q92547 1522 aa18.91■□□□□ 0.62
RPRD1A-202ENST00000399022 ST20-MTHFSA0A0A6YYL1 179 aa18.91■□□□□ 0.62
RPRD1A-202ENST00000399022 PNNQ9H307 717 aaKnown RBP18.9■□□□□ 0.62
RPRD1A-202ENST00000399022 SLC4A3P48751 1232 aa18.9■□□□□ 0.62
RPRD1A-202ENST00000399022 PEG3Q9GZU2 1588 aa18.9■□□□□ 0.62
RPRD1A-202ENST00000399022 CC2D2AQ9P2K1 1620 aa18.9■□□□□ 0.62
RPRD1A-202ENST00000399022 L1TD1Q5T7N2 865 aaKnown RBP18.89■□□□□ 0.62
RPRD1A-202ENST00000399022 PDE4AP27815 886 aa18.89■□□□□ 0.61
RPRD1A-202ENST00000399022 RCAN3Q9UKA8 241 aa18.89■□□□□ 0.61
RPRD1A-202ENST00000399022 TIAM1Q13009 1591 aa18.88■□□□□ 0.61
RPRD1A-202ENST00000399022 FYCO1Q9BQS8 1478 aa18.87■□□□□ 0.61
RPRD1A-202ENST00000399022 RSPH6AQ9H0K4 717 aa18.86■□□□□ 0.61
RPRD1A-202ENST00000399022 VSIG10Q8N0Z9 540 aa18.86■□□□□ 0.61
RPRD1A-202ENST00000399022 SLKQ9H2G2 1235 aaPredicted RBP18.86■□□□□ 0.61
RPRD1A-202ENST00000399022 EFCAB2Q5VUJ9 269 aa18.85■□□□□ 0.61
RPRD1A-202ENST00000399022 GGT6Q6P531 493 aa18.84■□□□□ 0.61
RPRD1A-202ENST00000399022 WASHC2AQ641Q2 1341 aa18.83■□□□□ 0.61
RPRD1A-202ENST00000399022 GZF1Q9H116 711 aaPredicted RBP18.83■□□□□ 0.6
RPRD1A-202ENST00000399022 SPRYD3Q8NCJ5 442 aa18.83■□□□□ 0.6
RPRD1A-202ENST00000399022 ZBED9Q6R2W3 1325 aa18.83■□□□□ 0.6
RPRD1A-202ENST00000399022 KTN1Q86UP2 1357 aaKnown RBP18.83■□□□□ 0.6
RPRD1A-202ENST00000399022 SAFB2Q14151 953 aaKnown RBP eCLIP18.81■□□□□ 0.6
RPRD1A-202ENST00000399022 BRPF3Q9ULD4 1205 aa18.81■□□□□ 0.6
RPRD1A-202ENST00000399022 USP47Q96K76 1375 aa18.8■□□□□ 0.6
RPRD1A-202ENST00000399022 FRAT1Q92837 279 aaPredicted RBP18.8■□□□□ 0.6
RPRD1A-202ENST00000399022 WDR97A6NE52 1622 aa18.79■□□□□ 0.6
RPRD1A-202ENST00000399022 KIF3BO15066 747 aa18.79■□□□□ 0.6
RPRD1A-202ENST00000399022 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
RPRD1A-202ENST00000399022 EXOC6Q8TAG9 804 aa18.78■□□□□ 0.6
RPRD1A-202ENST00000399022 RALBP1Q15311 655 aa18.78■□□□□ 0.6
RPRD1A-202ENST00000399022 KIF7Q2M1P5 1343 aa18.78■□□□□ 0.6
RPRD1A-202ENST00000399022 PTPRGP23470 1445 aa18.78■□□□□ 0.6
RPRD1A-202ENST00000399022 CFAP53Q96M91 514 aa18.77■□□□□ 0.6
RPRD1A-202ENST00000399022 HSP90AA2PQ14568 343 aaPredicted RBP18.77■□□□□ 0.59
RPRD1A-202ENST00000399022 GOLGA6L22H0YM25 854 aa18.76■□□□□ 0.59
RPRD1A-202ENST00000399022 KANK1Q14678 1352 aa18.75■□□□□ 0.59
RPRD1A-202ENST00000399022 CCDC7Q96M83 1385 aa18.75■□□□□ 0.59
RPRD1A-202ENST00000399022 NBPF8Q3BBV2 869 aa18.74■□□□□ 0.59
RPRD1A-202ENST00000399022 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
RPRD1A-202ENST00000399022 EFCAB5A4FU69 1503 aa18.74■□□□□ 0.59
RPRD1A-202ENST00000399022 NLRP13Q86W25 1043 aa18.73■□□□□ 0.59
RPRD1A-202ENST00000399022 SPAG9O60271 1321 aaKnown RBP18.73■□□□□ 0.59
RPRD1A-202ENST00000399022 RSPH4AQ5TD94 716 aa18.73■□□□□ 0.59
RPRD1A-202ENST00000399022 PCF11O94913 1555 aaKnown RBP18.73■□□□□ 0.59
RPRD1A-202ENST00000399022 HFM1A2PYH4 1435 aa18.72■□□□□ 0.59
RPRD1A-202ENST00000399022 DNMBPQ6XZF7 1577 aa18.72■□□□□ 0.59
RPRD1A-202ENST00000399022 POGKQ9P215 609 aa18.72■□□□□ 0.59
RPRD1A-202ENST00000399022 GRIN2BQ13224 1484 aa18.71■□□□□ 0.59
RPRD1A-202ENST00000399022 U2SURPO15042 1029 aaKnown RBP18.71■□□□□ 0.59
RPRD1A-202ENST00000399022 CCDC144AA2RUR9 1427 aa18.71■□□□□ 0.59
RPRD1A-202ENST00000399022 PANK3Q9H999 370 aa18.7■□□□□ 0.58
RPRD1A-202ENST00000399022 ABCA10Q8WWZ4 1543 aa18.7■□□□□ 0.58
RPRD1A-202ENST00000399022 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
RPRD1A-202ENST00000399022 STK26Q9P289 416 aa18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 BIVM-ERCC5R4GMW8 1640 aa18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 DNTTIP2Q5QJE6 756 aaKnown RBP18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 PLEKHG5O94827 1062 aa18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 MORC1Q86VD1 984 aa18.69■□□□□ 0.58
RPRD1A-202ENST00000399022 NAIPQ13075 1403 aa18.68■□□□□ 0.58
RPRD1A-202ENST00000399022 CCDC184Q52MB2 194 aa18.68■□□□□ 0.58
RPRD1A-202ENST00000399022 PLIN1O60240 522 aa18.68■□□□□ 0.58
RPRD1A-202ENST00000399022 NUTM2DQ5VT03 806 aaPredicted RBP18.67■□□□□ 0.58
RPRD1A-202ENST00000399022 ARID3AQ99856 593 aa18.67■□□□□ 0.58
RPRD1A-202ENST00000399022 PTMAP06454 111 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms