RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 NISCHQ9Y2I1 1504 aa26.47■■□□□ 1.83
RPRD1A-202ENST00000399022 DCAF8L2P0C7V8 631 aa25.32■■□□□ 1.64
RPRD1A-202ENST00000399022 SUPT5HO00267 1087 aaKnown RBP24.66■■□□□ 1.54
RPRD1A-202ENST00000399022 SHROOM4Q9ULL8 1493 aa24.64■■□□□ 1.54
RPRD1A-202ENST00000399022 PCGF6Q9BYE7 350 aa23.56■■□□□ 1.36
RPRD1A-202ENST00000399022 EHMT2Q96KQ7 1210 aa23.47■■□□□ 1.35
RPRD1A-202ENST00000399022 PELP1Q8IZL8 1130 aaKnown RBP23.38■■□□□ 1.33
RPRD1A-202ENST00000399022 HRCP23327 699 aa23.17■■□□□ 1.3
RPRD1A-202ENST00000399022 FAM9AQ8IZU1 332 aaPredicted RBP23.11■■□□□ 1.29
RPRD1A-202ENST00000399022 PPARGC1BQ86YN6 1023 aaKnown RBP22.85■■□□□ 1.25
RPRD1A-202ENST00000399022 MYT1Q01538 1121 aa22.78■■□□□ 1.24
RPRD1A-202ENST00000399022 TRIM41Q8WV44 630 aa22.74■■□□□ 1.23
RPRD1A-202ENST00000399022 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
RPRD1A-202ENST00000399022 CHIC1Q5VXU3 224 aa22.69■■□□□ 1.22
RPRD1A-202ENST00000399022 CENPBP07199 599 aaPredicted RBP22.64■■□□□ 1.22
RPRD1A-202ENST00000399022 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.21
RPRD1A-202ENST00000399022 LOC105371045A0A1W2PR82 267 aa22.54■■□□□ 1.2
RPRD1A-202ENST00000399022 TRIM26Q12899 539 aaPredicted RBP22.39■■□□□ 1.17
RPRD1A-202ENST00000399022 CCER1Q8TC90 406 aaPredicted RBP22.34■■□□□ 1.17
RPRD1A-202ENST00000399022 RANGAP1P46060 587 aaPredicted RBP22.29■■□□□ 1.16
RPRD1A-202ENST00000399022 APLP2Q06481 763 aa22.24■■□□□ 1.15
RPRD1A-202ENST00000399022 YTHDC1Q96MU7 727 aaKnown RBP22.23■■□□□ 1.15
RPRD1A-202ENST00000399022 UBTFP17480 764 aaKnown RBP22.15■■□□□ 1.14
RPRD1A-202ENST00000399022 ABCC9O60706 1549 aa22.09■■□□□ 1.13
RPRD1A-202ENST00000399022 ZCCHC6Q5VYS8 1495 aaKnown RBP22.08■■□□□ 1.13
RPRD1A-202ENST00000399022 GTF3C3Q9Y5Q9 886 aa21.89■■□□□ 1.1
RPRD1A-202ENST00000399022 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
RPRD1A-202ENST00000399022 PABPN1Q86U42 306 aaKnown RBP eCLIP21.77■■□□□ 1.07
RPRD1A-202ENST00000399022 ERICH6Q7L0X2 663 aa21.76■■□□□ 1.07
RPRD1A-202ENST00000399022 SCAF1Q9H7N4 1312 aaKnown RBP21.73■■□□□ 1.07
RPRD1A-202ENST00000399022 CCDC180Q9P1Z9 1646 aa21.73■■□□□ 1.07
RPRD1A-202ENST00000399022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
RPRD1A-202ENST00000399022 ACIN1Q9UKV3 1341 aaKnown RBP21.71■■□□□ 1.07
RPRD1A-202ENST00000399022 ATP1B4Q9UN42 357 aaPredicted RBP21.7■■□□□ 1.06
RPRD1A-202ENST00000399022 SCRIBQ14160 1630 aa21.6■■□□□ 1.05
RPRD1A-202ENST00000399022 MYO15BQ96JP2 1530 aa21.56■■□□□ 1.04
RPRD1A-202ENST00000399022 HNRNPUL2Q1KMD3 747 aaKnown RBP21.54■■□□□ 1.04
RPRD1A-202ENST00000399022 NEFLP07196 543 aa21.49■■□□□ 1.03
RPRD1A-202ENST00000399022 NEUROD1Q13562 356 aa21.46■■□□□ 1.03
RPRD1A-202ENST00000399022 ITGAEP38570 1179 aa21.42■■□□□ 1.02
RPRD1A-202ENST00000399022 DCAF1Q9Y4B6 1507 aa21.26■□□□□ 0.99
RPRD1A-202ENST00000399022 RSF1Q96T23 1441 aaPredicted RBP21.24■□□□□ 0.99
RPRD1A-202ENST00000399022 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
RPRD1A-202ENST00000399022 ZNF316A6NFI3 1004 aaPredicted RBP21.15■□□□□ 0.98
RPRD1A-202ENST00000399022 BCANQ96GW7 911 aa21.12■□□□□ 0.97
RPRD1A-202ENST00000399022 CECR2Q9BXF3 1484 aa20.94■□□□□ 0.94
RPRD1A-202ENST00000399022 FAM50AQ14320 339 aaKnown RBP20.89■□□□□ 0.93
RPRD1A-202ENST00000399022 P3H3Q8IVL6 736 aa20.8■□□□□ 0.92
RPRD1A-202ENST00000399022 NACADO15069 1562 aa20.8■□□□□ 0.92
RPRD1A-202ENST00000399022 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
RPRD1A-202ENST00000399022 MIER1Q8N108 512 aa20.77■□□□□ 0.92
RPRD1A-202ENST00000399022 RTL5Q5HYW3 569 aaPredicted RBP20.69■□□□□ 0.9
RPRD1A-202ENST00000399022 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
RPRD1A-202ENST00000399022 MROH2BQ7Z745 1585 aa20.67■□□□□ 0.9
RPRD1A-202ENST00000399022 POLR3GLQ9BT43 218 aa20.65■□□□□ 0.9
RPRD1A-202ENST00000399022 CLSPNQ9HAW4 1339 aa20.65■□□□□ 0.9
RPRD1A-202ENST00000399022 ANP32EQ9BTT0 268 aa20.63■□□□□ 0.89
RPRD1A-202ENST00000399022 FKBP8Q14318 412 aa20.63■□□□□ 0.89
RPRD1A-202ENST00000399022 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
RPRD1A-202ENST00000399022 CDK11AQ9UQ88 783 aaPredicted RBP20.61■□□□□ 0.89
RPRD1A-202ENST00000399022 BAZ1AQ9NRL2 1556 aaPredicted RBP20.55■□□□□ 0.88
RPRD1A-202ENST00000399022 BCL11AQ9H165 835 aa20.55■□□□□ 0.88
RPRD1A-202ENST00000399022 ARID3CA6NKF2 412 aa20.54■□□□□ 0.88
RPRD1A-202ENST00000399022 CLIP1P30622 1438 aa20.53■□□□□ 0.88
RPRD1A-202ENST00000399022 TRIM52Q96A61 297 aa20.53■□□□□ 0.88
RPRD1A-202ENST00000399022 WRNQ14191 1432 aaPredicted RBP eCLIP20.53■□□□□ 0.88
RPRD1A-202ENST00000399022 SOGA1O94964 1423 aa20.49■□□□□ 0.87
RPRD1A-202ENST00000399022 DAXXQ9UER7 740 aaPredicted RBP20.46■□□□□ 0.87
RPRD1A-202ENST00000399022 ANP32CO43423 234 aa20.44■□□□□ 0.86
RPRD1A-202ENST00000399022 GOLGA3Q08378 1498 aa20.44■□□□□ 0.86
RPRD1A-202ENST00000399022 TNIKQ9UKE5 1360 aa20.43■□□□□ 0.86
RPRD1A-202ENST00000399022 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
RPRD1A-202ENST00000399022 EEA1Q15075 1411 aa20.42■□□□□ 0.86
RPRD1A-202ENST00000399022 WIZO95785 1651 aa20.41■□□□□ 0.86
RPRD1A-202ENST00000399022 BAZ1BQ9UIG0 1483 aaKnown RBP20.39■□□□□ 0.86
RPRD1A-202ENST00000399022 CCDC88BA6NC98 1476 aa20.39■□□□□ 0.85
RPRD1A-202ENST00000399022 FBLN2P98095 1184 aa20.38■□□□□ 0.85
RPRD1A-202ENST00000399022 SUPT16HQ9Y5B9 1047 aaKnown RBP20.35■□□□□ 0.85
RPRD1A-202ENST00000399022 MYT1LQ9UL68 1186 aa20.32■□□□□ 0.84
RPRD1A-202ENST00000399022 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
RPRD1A-202ENST00000399022 DDX10Q13206 875 aaKnown RBP20.27■□□□□ 0.84
RPRD1A-202ENST00000399022 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
RPRD1A-202ENST00000399022 NBR1Q14596 966 aa20.24■□□□□ 0.83
RPRD1A-202ENST00000399022 EIF5BO60841 1220 aaKnown RBP20.2■□□□□ 0.82
RPRD1A-202ENST00000399022 HIRIP3Q9BW71 556 aaPredicted RBP20.18■□□□□ 0.82
RPRD1A-202ENST00000399022 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
RPRD1A-202ENST00000399022 CHIC2Q9UKJ5 165 aa20.17■□□□□ 0.82
RPRD1A-202ENST00000399022 ZNF777Q9ULD5 760 aaPredicted RBP20.15■□□□□ 0.82
RPRD1A-202ENST00000399022 IRX6P78412 446 aaPredicted RBP20.14■□□□□ 0.81
RPRD1A-202ENST00000399022 HNRNPUQ00839 825 aaKnown RBP eCLIP20.14■□□□□ 0.81
RPRD1A-202ENST00000399022 KIF27Q86VH2 1401 aa20.13■□□□□ 0.81
RPRD1A-202ENST00000399022 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
RPRD1A-202ENST00000399022 TOP2AP11388 1531 aaKnown RBP20.12■□□□□ 0.81
RPRD1A-202ENST00000399022 RUSC2Q8N2Y8 1516 aa20.1■□□□□ 0.81
RPRD1A-202ENST00000399022 TONSLQ96HA7 1378 aa20.1■□□□□ 0.81
RPRD1A-202ENST00000399022 NPM2Q86SE8 214 aaKnown RBP20.09■□□□□ 0.81
RPRD1A-202ENST00000399022 MTUS2Q5JR59 1369 aa20.06■□□□□ 0.8
RPRD1A-202ENST00000399022 KANK4Q5T7N3 995 aaPredicted RBP20.03■□□□□ 0.8
RPRD1A-202ENST00000399022 RBM19Q9Y4C8 960 aaKnown RBP20.02■□□□□ 0.8
RPRD1A-202ENST00000399022 VPS8Q8N3P4 1428 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms