RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 ARHGAP5Q13017 1502 aa30.02■■■□□ 2.4
MAP1LC3A-203ENST00000397709 TSPOAP1O95153 1857 aa30.02■■■□□ 2.4
MAP1LC3A-203ENST00000397709 MIA2Q96PC5 1412 aa30.01■■■□□ 2.39
MAP1LC3A-203ENST00000397709 FGD6Q6ZV73 1430 aa30■■■□□ 2.39
MAP1LC3A-203ENST00000397709 CFDP1Q9UEE9 299 aaPredicted RBP29.99■■■□□ 2.39
MAP1LC3A-203ENST00000397709 FANCAO15360 1455 aa29.98■■■□□ 2.39
MAP1LC3A-203ENST00000397709 CFAP74Q9C0B2 1584 aa29.97■■■□□ 2.39
MAP1LC3A-203ENST00000397709 TEX14Q8IWB6 1497 aa29.96■■■□□ 2.39
MAP1LC3A-203ENST00000397709 EFCAB2Q5VUJ9 269 aa29.95■■■□□ 2.39
MAP1LC3A-203ENST00000397709 NEO1Q92859 1461 aa29.94■■■□□ 2.38
MAP1LC3A-203ENST00000397709 SAMD9LQ8IVG5 1584 aa29.94■■■□□ 2.38
MAP1LC3A-203ENST00000397709 PTPN23Q9H3S7 1636 aa29.93■■■□□ 2.38
MAP1LC3A-203ENST00000397709 RRBP1Q9P2E9 1410 aaKnown RBP29.92■■■□□ 2.38
MAP1LC3A-203ENST00000397709 TCOF1Q13428 1488 aaKnown RBP29.92■■■□□ 2.38
MAP1LC3A-203ENST00000397709 CAMSAP2Q08AD1 1489 aa29.9■■■□□ 2.38
MAP1LC3A-203ENST00000397709 AKNAQ7Z591 1439 aa29.88■■■□□ 2.37
MAP1LC3A-203ENST00000397709 ABCC1P33527 1531 aa29.87■■■□□ 2.37
MAP1LC3A-203ENST00000397709 ZNF777Q9ULD5 760 aaPredicted RBP29.87■■■□□ 2.37
MAP1LC3A-203ENST00000397709 ZNF644Q9H582 1327 aaPredicted RBP29.87■■■□□ 2.37
MAP1LC3A-203ENST00000397709 PLEKHH2Q8IVE3 1493 aa29.86■■■□□ 2.37
MAP1LC3A-203ENST00000397709 ADGRL1O94910 1474 aa29.83■■■□□ 2.37
MAP1LC3A-203ENST00000397709 KIAA1107Q9UPP5 1409 aa29.83■■■□□ 2.37
MAP1LC3A-203ENST00000397709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.81■■■□□ 2.36
MAP1LC3A-203ENST00000397709 SYCP2Q9BX26 1530 aa29.81■■■□□ 2.36
MAP1LC3A-203ENST00000397709 ARHGEF12Q9NZN5 1544 aa29.81■■■□□ 2.36
MAP1LC3A-203ENST00000397709 MBD5Q9P267 1494 aa29.78■■■□□ 2.36
MAP1LC3A-203ENST00000397709 SCAPERQ9BY12 1400 aa29.78■■■□□ 2.36
MAP1LC3A-203ENST00000397709 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
MAP1LC3A-203ENST00000397709 FAM50AQ14320 339 aaKnown RBP29.76■■■□□ 2.35
MAP1LC3A-203ENST00000397709 HNRNPMP52272 730 aaKnown RBP eCLIP29.73■■■□□ 2.35
MAP1LC3A-203ENST00000397709 DNMT1P26358 1616 aaKnown RBP29.72■■■□□ 2.35
MAP1LC3A-203ENST00000397709 DENND4BO75064 1496 aaPredicted RBP29.72■■■□□ 2.35
MAP1LC3A-203ENST00000397709 POGZQ7Z3K3 1410 aa29.71■■■□□ 2.35
MAP1LC3A-203ENST00000397709 TRAPPC8Q9Y2L5 1435 aa29.71■■■□□ 2.35
MAP1LC3A-203ENST00000397709 CCDC141Q6ZP82 1450 aa29.7■■■□□ 2.35
MAP1LC3A-203ENST00000397709 COL17A1Q9UMD9 1497 aaPredicted RBP29.69■■■□□ 2.34
MAP1LC3A-203ENST00000397709 RICTORQ6R327 1708 aa29.69■■■□□ 2.34
MAP1LC3A-203ENST00000397709 ABCC5O15440 1437 aa29.68■■■□□ 2.34
MAP1LC3A-203ENST00000397709 FRMPD1Q5SYB0 1578 aa29.68■■■□□ 2.34
MAP1LC3A-203ENST00000397709 RSPH4AQ5TD94 716 aa29.67■■■□□ 2.34
MAP1LC3A-203ENST00000397709 DAPK1P53355 1430 aa29.67■■■□□ 2.34
MAP1LC3A-203ENST00000397709 ZNF518AQ6AHZ1 1483 aa29.67■■■□□ 2.34
MAP1LC3A-203ENST00000397709 CROCC2H7BZ55 1655 aa29.66■■■□□ 2.34
MAP1LC3A-203ENST00000397709 KDM5CP41229 1560 aa29.65■■■□□ 2.34
MAP1LC3A-203ENST00000397709 KDM6BO15054 1643 aa29.64■■■□□ 2.34
MAP1LC3A-203ENST00000397709 SHANK2Q9UPX8 1470 aa29.62■■■□□ 2.33
MAP1LC3A-203ENST00000397709 RAPGEF3O95398 923 aa29.62■■■□□ 2.33
MAP1LC3A-203ENST00000397709 AFAP1Q8N556 730 aa29.62■■■□□ 2.33
MAP1LC3A-203ENST00000397709 PTPRKQ15262 1439 aa29.6■■■□□ 2.33
MAP1LC3A-203ENST00000397709 ZMYM4Q5VZL5 1548 aa29.6■■■□□ 2.33
MAP1LC3A-203ENST00000397709 MAST1Q9Y2H9 1570 aa29.6■■■□□ 2.33
MAP1LC3A-203ENST00000397709 TRIM26Q12899 539 aaPredicted RBP29.59■■■□□ 2.33
MAP1LC3A-203ENST00000397709 INO80Q9ULG1 1556 aaPredicted RBP29.56■■■□□ 2.32
MAP1LC3A-203ENST00000397709 C9orf84Q5VXU9 1444 aa29.56■■■□□ 2.32
MAP1LC3A-203ENST00000397709 ZFYVE16Q7Z3T8 1539 aa29.55■■■□□ 2.32
MAP1LC3A-203ENST00000397709 HECW2Q9P2P5 1572 aa29.55■■■□□ 2.32
MAP1LC3A-203ENST00000397709 MLH3Q9UHC1 1453 aa29.55■■■□□ 2.32
MAP1LC3A-203ENST00000397709 TSPY4P0CV99 314 aa29.54■■■□□ 2.32
MAP1LC3A-203ENST00000397709 TSPY10P0CW01 314 aa29.54■■■□□ 2.32
MAP1LC3A-203ENST00000397709 ITGAEP38570 1179 aa29.54■■■□□ 2.32
MAP1LC3A-203ENST00000397709 SPAG9O60271 1321 aaKnown RBP29.53■■■□□ 2.32
MAP1LC3A-203ENST00000397709 RTEL1-TNFRSF6BF6WH68 1400 aa29.53■■■□□ 2.32
MAP1LC3A-203ENST00000397709 ATP7AQ04656 1500 aa29.52■■■□□ 2.32
MAP1LC3A-203ENST00000397709 ADGBQ8N7X0 1667 aa29.52■■■□□ 2.32
MAP1LC3A-203ENST00000397709 KIDINS220Q9ULH0 1771 aa29.52■■■□□ 2.32
MAP1LC3A-203ENST00000397709 ADGRL2O95490 1459 aa29.51■■■□□ 2.31
MAP1LC3A-203ENST00000397709 MAGI2Q86UL8 1455 aa29.49■■■□□ 2.31
MAP1LC3A-203ENST00000397709 PLXNC1O60486 1568 aa29.47■■■□□ 2.31
MAP1LC3A-203ENST00000397709 CHIC2Q9UKJ5 165 aa29.46■■■□□ 2.31
MAP1LC3A-203ENST00000397709 ROCK1Q13464 1354 aa29.46■■■□□ 2.31
MAP1LC3A-203ENST00000397709 NCOA1Q15788 1441 aa29.44■■■□□ 2.3
MAP1LC3A-203ENST00000397709 ABCA6Q8N139 1617 aa29.43■■■□□ 2.3
MAP1LC3A-203ENST00000397709 ANKRD30AQ9BXX3 1397 aa29.42■■■□□ 2.3
MAP1LC3A-203ENST00000397709 YEATS2Q9ULM3 1422 aa29.42■■■□□ 2.3
MAP1LC3A-203ENST00000397709 ARHGEF40Q8TER5 1519 aa29.41■■■□□ 2.3
MAP1LC3A-203ENST00000397709 DIP2CQ9Y2E4 1556 aa29.41■■■□□ 2.3
MAP1LC3A-203ENST00000397709 MYT1LQ9UL68 1186 aa29.39■■■□□ 2.3
MAP1LC3A-203ENST00000397709 KIF15Q9NS87 1388 aa29.37■■■□□ 2.29
MAP1LC3A-203ENST00000397709 RRP7BPQ9NSQ0 103 aa29.34■■■□□ 2.29
MAP1LC3A-203ENST00000397709 HFM1A2PYH4 1435 aa29.34■■■□□ 2.29
MAP1LC3A-203ENST00000397709 GCC2Q8IWJ2 1684 aa29.34■■■□□ 2.29
MAP1LC3A-203ENST00000397709 DUOX2Q9NRD8 1548 aa29.33■■■□□ 2.29
MAP1LC3A-203ENST00000397709 REREQ9P2R6 1566 aa29.32■■■□□ 2.28
MAP1LC3A-203ENST00000397709 ATP10AO60312 1499 aa29.32■■■□□ 2.28
MAP1LC3A-203ENST00000397709 NAIPQ13075 1403 aa29.32■■■□□ 2.28
MAP1LC3A-203ENST00000397709 A2MP01023 1474 aa29.3■■■□□ 2.28
MAP1LC3A-203ENST00000397709 DHX29Q7Z478 1369 aaKnown RBP29.28■■■□□ 2.28
MAP1LC3A-203ENST00000397709 PCGF6Q9BYE7 350 aa29.27■■■□□ 2.28
MAP1LC3A-203ENST00000397709 ERBINQ96RT1 1412 aa29.26■■■□□ 2.27
MAP1LC3A-203ENST00000397709 ANKRD50Q9ULJ7 1429 aa29.25■■■□□ 2.27
MAP1LC3A-203ENST00000397709 EIF2AK4Q9P2K8 1649 aaKnown RBP29.23■■■□□ 2.27
MAP1LC3A-203ENST00000397709 SETD5Q9C0A6 1442 aa29.22■■■□□ 2.27
MAP1LC3A-203ENST00000397709 SIGLEC1Q9BZZ2 1709 aa29.22■■■□□ 2.27
MAP1LC3A-203ENST00000397709 AGLP35573 1532 aa29.2■■■□□ 2.27
MAP1LC3A-203ENST00000397709 BCORL1Q5H9F3 1711 aa29.2■■■□□ 2.27
MAP1LC3A-203ENST00000397709 RAB3GAP2Q9H2M9 1393 aa29.13■■■□□ 2.25
MAP1LC3A-203ENST00000397709 RNF17Q9BXT8 1623 aaKnown RBP29.12■■■□□ 2.25
MAP1LC3A-203ENST00000397709 DEPDC5O75140 1603 aa29.11■■■□□ 2.25
MAP1LC3A-203ENST00000397709 UNC13BO14795 1591 aa29.09■■■□□ 2.25
MAP1LC3A-203ENST00000397709 KIF3BO15066 747 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms