RNA–Protein interactions for RNA: ENST00000396123.2

GREB1-206, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 1 (best) BASIC

Gene GREB1, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-206ENST00000396123 HAP1P54257 671 aaPredicted RBP16.86■□□□□ 0.29
GREB1-206ENST00000396123 RUSC2Q8N2Y8 1516 aa16.86■□□□□ 0.29
GREB1-206ENST00000396123 L3MBTL2Q969R5 705 aa16.85■□□□□ 0.29
GREB1-206ENST00000396123 SMARCA4P51532 1647 aa16.85■□□□□ 0.29
GREB1-206ENST00000396123 RALBP1Q15311 655 aa16.85■□□□□ 0.29
GREB1-206ENST00000396123 MORC1Q86VD1 984 aa16.85■□□□□ 0.29
GREB1-206ENST00000396123 DHX57Q6P158 1386 aaKnown RBP16.84■□□□□ 0.29
GREB1-206ENST00000396123 ROCK2O75116 1388 aaKnown RBP16.83■□□□□ 0.29
GREB1-206ENST00000396123 SRPK2P78362 688 aaKnown RBP16.81■□□□□ 0.28
GREB1-206ENST00000396123 EFCAB2Q5VUJ9 269 aa16.79■□□□□ 0.28
GREB1-206ENST00000396123 RCAN3Q9UKA8 241 aa16.79■□□□□ 0.28
GREB1-206ENST00000396123 GGT6Q6P531 493 aa16.78■□□□□ 0.28
GREB1-206ENST00000396123 CCDC18Q5T9S5 1454 aa16.76■□□□□ 0.27
GREB1-206ENST00000396123 SAFB2Q14151 953 aaKnown RBP eCLIP16.76■□□□□ 0.27
GREB1-206ENST00000396123 HDGFP51858 240 aaKnown RBP16.74■□□□□ 0.27
GREB1-206ENST00000396123 RSPH4AQ5TD94 716 aa16.73■□□□□ 0.27
GREB1-206ENST00000396123 HSP90AB1P08238 724 aaKnown RBP16.73■□□□□ 0.27
GREB1-206ENST00000396123 HNRNPMP52272 730 aaKnown RBP eCLIP16.73■□□□□ 0.272e-7■■□□□ 11.6
GREB1-206ENST00000396123 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
GREB1-206ENST00000396123 TSHZ2Q9NRE2 1034 aa16.71■□□□□ 0.27
GREB1-206ENST00000396123 PTMAP06454 111 aaKnown RBP16.71■□□□□ 0.27
GREB1-206ENST00000396123 NLRP13Q86W25 1043 aa16.7■□□□□ 0.26
GREB1-206ENST00000396123 TCERG1O14776 1098 aaKnown RBP16.7■□□□□ 0.26
GREB1-206ENST00000396123 STK26Q9P289 416 aa16.7■□□□□ 0.26
GREB1-206ENST00000396123 HDGFL2Q7Z4V5 671 aaPredicted RBP16.69■□□□□ 0.26
GREB1-206ENST00000396123 HSCBQ8IWL3 235 aa16.69■□□□□ 0.26
GREB1-206ENST00000396123 MLECQ14165 292 aa16.69■□□□□ 0.26
GREB1-206ENST00000396123 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
GREB1-206ENST00000396123 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
GREB1-206ENST00000396123 EIF3AQ14152 1382 aaKnown RBP16.68■□□□□ 0.26
GREB1-206ENST00000396123 IPO8O15397 1037 aaKnown RBP16.67■□□□□ 0.26
GREB1-206ENST00000396123 JPH4Q96JJ6 628 aa16.67■□□□□ 0.26
GREB1-206ENST00000396123 PDE3BQ13370 1112 aa16.66■□□□□ 0.26
GREB1-206ENST00000396123 OS9Q13438 667 aaPredicted RBP16.66■□□□□ 0.26
GREB1-206ENST00000396123 KIF3BO15066 747 aa16.66■□□□□ 0.26
GREB1-206ENST00000396123 ZRSR1Q15695 479 aaKnown RBP16.66■□□□□ 0.26
GREB1-206ENST00000396123 TRHP20396 242 aaPredicted RBP16.65■□□□□ 0.26
GREB1-206ENST00000396123 FANCD2Q9BXW9 1451 aa16.65■□□□□ 0.26
GREB1-206ENST00000396123 SOX12O15370 315 aa16.64■□□□□ 0.25
GREB1-206ENST00000396123 TPRNQ4KMQ1 711 aa16.64■□□□□ 0.25
GREB1-206ENST00000396123 GOLGA2Q08379 1002 aa16.64■□□□□ 0.25
GREB1-206ENST00000396123 DEKP35659 375 aaKnown RBP16.63■□□□□ 0.25
GREB1-206ENST00000396123 RWDD1Q9H446 243 aaPredicted RBP16.63■□□□□ 0.25
GREB1-206ENST00000396123 SPAG9O60271 1321 aaKnown RBP16.62■□□□□ 0.25
GREB1-206ENST00000396123 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
GREB1-206ENST00000396123 RTN4Q9NQC3 1192 aaKnown RBP16.62■□□□□ 0.25
GREB1-206ENST00000396123 KIF15Q9NS87 1388 aa16.62■□□□□ 0.25
GREB1-206ENST00000396123 ST20-MTHFSA0A0A6YYL1 179 aa16.62■□□□□ 0.25
GREB1-206ENST00000396123 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
GREB1-206ENST00000396123 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
GREB1-206ENST00000396123 IGF1RP08069 1367 aa16.61■□□□□ 0.25
GREB1-206ENST00000396123 PRKRIP1Q9H875 184 aaPredicted RBP16.61■□□□□ 0.25
GREB1-206ENST00000396123 PHLDB1Q86UU1 1377 aa16.61■□□□□ 0.25
GREB1-206ENST00000396123 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
GREB1-206ENST00000396123 RTF1Q92541 710 aaKnown RBP16.6■□□□□ 0.25
GREB1-206ENST00000396123 KCNJ4P48050 445 aa16.6■□□□□ 0.25
GREB1-206ENST00000396123 MYBBP1AQ9BQG0 1328 aaKnown RBP16.6■□□□□ 0.25
GREB1-206ENST00000396123 ITPRIPQ8IWB1 547 aa16.58■□□□□ 0.24
GREB1-206ENST00000396123 SPRYD3Q8NCJ5 442 aa16.58■□□□□ 0.24
GREB1-206ENST00000396123 CCDC144AA2RUR9 1427 aa16.57■□□□□ 0.24
GREB1-206ENST00000396123 MCCP23508 829 aa16.57■□□□□ 0.24
GREB1-206ENST00000396123 FGD1P98174 961 aa16.57■□□□□ 0.24
GREB1-206ENST00000396123 PMFBP1Q8TBY8 1022 aa16.57■□□□□ 0.24
GREB1-206ENST00000396123 L1TD1Q5T7N2 865 aaKnown RBP16.57■□□□□ 0.24
GREB1-206ENST00000396123 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
GREB1-206ENST00000396123 TERF2IPQ9NYB0 399 aa16.55■□□□□ 0.24
GREB1-206ENST00000396123 CCDC146Q8IYE0 955 aa16.55■□□□□ 0.24
GREB1-206ENST00000396123 PLCB2Q00722 1185 aa16.55■□□□□ 0.24
GREB1-206ENST00000396123 IPO9Q96P70 1041 aaKnown RBP16.55■□□□□ 0.24
GREB1-206ENST00000396123 FGD5Q6ZNL6 1462 aa16.54■□□□□ 0.24
GREB1-206ENST00000396123 PANK3Q9H999 370 aa16.54■□□□□ 0.24
GREB1-206ENST00000396123 KIF21BO75037 1637 aa16.53■□□□□ 0.24
GREB1-206ENST00000396123 ZBED9Q6R2W3 1325 aa16.53■□□□□ 0.24
GREB1-206ENST00000396123 USP47Q96K76 1375 aa16.53■□□□□ 0.24
GREB1-206ENST00000396123 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
GREB1-206ENST00000396123 NPHP1O15259 732 aa16.53■□□□□ 0.24
GREB1-206ENST00000396123 CENPJQ9HC77 1338 aaPredicted RBP16.53■□□□□ 0.24
GREB1-206ENST00000396123 WASHC2CQ9Y4E1 1318 aa16.52■□□□□ 0.24
GREB1-206ENST00000396123 APBB1O00213 710 aa16.52■□□□□ 0.23
GREB1-206ENST00000396123 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
GREB1-206ENST00000396123 SLKQ9H2G2 1235 aaPredicted RBP16.5■□□□□ 0.23
GREB1-206ENST00000396123 CLUAP1Q96AJ1 413 aa16.49■□□□□ 0.23
GREB1-206ENST00000396123 GOLGA6L4A6NEF3 574 aa16.49■□□□□ 0.23
GREB1-206ENST00000396123 GAPVD1Q14C86 1478 aa16.49■□□□□ 0.23
GREB1-206ENST00000396123 TRAK1Q9UPV9 953 aa16.48■□□□□ 0.23
GREB1-206ENST00000396123 PTPRGP23470 1445 aa16.48■□□□□ 0.23
GREB1-206ENST00000396123 MYOM3Q5VTT5 1437 aa16.47■□□□□ 0.23
GREB1-206ENST00000396123 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
GREB1-206ENST00000396123 NAP1L2Q9ULW6 460 aaPredicted RBP16.47■□□□□ 0.23
GREB1-206ENST00000396123 NUTM2DQ5VT03 806 aaPredicted RBP16.47■□□□□ 0.23
GREB1-206ENST00000396123 LRRC9Q6ZRR7 1453 aa16.46■□□□□ 0.23
GREB1-206ENST00000396123 UACAQ9BZF9 1416 aa16.46■□□□□ 0.23
GREB1-206ENST00000396123 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
GREB1-206ENST00000396123 MFAP1P55081 439 aaKnown RBP16.45■□□□□ 0.22
GREB1-206ENST00000396123 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
GREB1-206ENST00000396123 PTMSP20962 102 aa16.44■□□□□ 0.22
GREB1-206ENST00000396123 KIAA1211Q6ZU35 1233 aa16.44■□□□□ 0.22
GREB1-206ENST00000396123 RRP1P56182 461 aaKnown RBP16.44■□□□□ 0.22
GREB1-206ENST00000396123 TAOK2Q9UL54 1235 aa16.44■□□□□ 0.22
GREB1-206ENST00000396123 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms