RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 MYOM3Q5VTT5 1437 aa29.11■■■□□ 2.25
LMNB1-202ENST00000395354 TSPOAP1O95153 1857 aa29.1■■■□□ 2.25
LMNB1-202ENST00000395354 EFCAB2Q5VUJ9 269 aa29.09■■■□□ 2.25
LMNB1-202ENST00000395354 PREX2Q70Z35 1606 aa29.08■■■□□ 2.25
LMNB1-202ENST00000395354 CDC42BPBQ9Y5S2 1711 aa29.08■■■□□ 2.25
LMNB1-202ENST00000395354 ITSN2Q9NZM3 1697 aa29.07■■■□□ 2.24
LMNB1-202ENST00000395354 ZNF777Q9ULD5 760 aaPredicted RBP29.07■■■□□ 2.24
LMNB1-202ENST00000395354 ARHGAP5Q13017 1502 aa29.07■■■□□ 2.24
LMNB1-202ENST00000395354 ARAP3Q8WWN8 1544 aa29.06■■■□□ 2.24
LMNB1-202ENST00000395354 FANCAO15360 1455 aa29.03■■■□□ 2.24
LMNB1-202ENST00000395354 MIA2Q96PC5 1412 aa29.03■■■□□ 2.24
LMNB1-202ENST00000395354 PPRC1Q5VV67 1664 aaKnown RBP29.02■■■□□ 2.24
LMNB1-202ENST00000395354 TEX14Q8IWB6 1497 aa29.01■■■□□ 2.23
LMNB1-202ENST00000395354 FGD6Q6ZV73 1430 aa29.01■■■□□ 2.23
LMNB1-202ENST00000395354 ZNF644Q9H582 1327 aaPredicted RBP29■■■□□ 2.23
LMNB1-202ENST00000395354 AKNAQ7Z591 1439 aa28.97■■■□□ 2.23
LMNB1-202ENST00000395354 NEO1Q92859 1461 aa28.96■■■□□ 2.23
LMNB1-202ENST00000395354 CFAP74Q9C0B2 1584 aa28.94■■■□□ 2.22
LMNB1-202ENST00000395354 FAM50AQ14320 339 aaKnown RBP28.92■■■□□ 2.22
LMNB1-202ENST00000395354 SAMD9LQ8IVG5 1584 aa28.92■■■□□ 2.22
LMNB1-202ENST00000395354 PTPN23Q9H3S7 1636 aa28.92■■■□□ 2.22
LMNB1-202ENST00000395354 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.92■■■□□ 2.229e-7■■■■□ 23.3
LMNB1-202ENST00000395354 CAMSAP2Q08AD1 1489 aa28.91■■■□□ 2.22
LMNB1-202ENST00000395354 HNRNPMP52272 730 aaKnown RBP eCLIP28.9■■■□□ 2.22
LMNB1-202ENST00000395354 ADGRL1O94910 1474 aa28.89■■■□□ 2.22
LMNB1-202ENST00000395354 PLEKHH2Q8IVE3 1493 aa28.89■■■□□ 2.21
LMNB1-202ENST00000395354 CCER1Q8TC90 406 aaPredicted RBP28.88■■■□□ 2.21
LMNB1-202ENST00000395354 TCOF1Q13428 1488 aaKnown RBP28.88■■■□□ 2.21
LMNB1-202ENST00000395354 SCAPERQ9BY12 1400 aa28.88■■■□□ 2.21
LMNB1-202ENST00000395354 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
LMNB1-202ENST00000395354 ABCC1P33527 1531 aa28.85■■■□□ 2.21
LMNB1-202ENST00000395354 ARHGEF12Q9NZN5 1544 aa28.84■■■□□ 2.21
LMNB1-202ENST00000395354 SYCP2Q9BX26 1530 aa28.83■■■□□ 2.21
LMNB1-202ENST00000395354 RSPH4AQ5TD94 716 aa28.81■■■□□ 2.2
LMNB1-202ENST00000395354 MBD5Q9P267 1494 aa28.81■■■□□ 2.2
LMNB1-202ENST00000395354 DENND4BO75064 1496 aaPredicted RBP28.8■■■□□ 2.2
LMNB1-202ENST00000395354 RAPGEF3O95398 923 aa28.79■■■□□ 2.2
LMNB1-202ENST00000395354 AFAP1Q8N556 730 aa28.79■■■□□ 2.2
LMNB1-202ENST00000395354 COL17A1Q9UMD9 1497 aaPredicted RBP28.78■■■□□ 2.2
LMNB1-202ENST00000395354 TRAPPC8Q9Y2L5 1435 aa28.78■■■□□ 2.2
LMNB1-202ENST00000395354 ITGAEP38570 1179 aa28.75■■■□□ 2.19
LMNB1-202ENST00000395354 POGZQ7Z3K3 1410 aa28.74■■■□□ 2.19
LMNB1-202ENST00000395354 ARHGEF5Q12774 1597 aa28.74■■■□□ 2.19
LMNB1-202ENST00000395354 TSPY4P0CV99 314 aa28.72■■■□□ 2.19
LMNB1-202ENST00000395354 TSPY10P0CW01 314 aa28.72■■■□□ 2.19
LMNB1-202ENST00000395354 ABCC5O15440 1437 aa28.72■■■□□ 2.19
LMNB1-202ENST00000395354 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
LMNB1-202ENST00000395354 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
LMNB1-202ENST00000395354 DAPK1P53355 1430 aa28.7■■■□□ 2.19
LMNB1-202ENST00000395354 KDM6BO15054 1643 aa28.7■■■□□ 2.19
LMNB1-202ENST00000395354 DNMT1P26358 1616 aaKnown RBP28.7■■■□□ 2.18
LMNB1-202ENST00000395354 RICTORQ6R327 1708 aa28.68■■■□□ 2.18
LMNB1-202ENST00000395354 SPAG9O60271 1321 aaKnown RBP28.67■■■□□ 2.18
LMNB1-202ENST00000395354 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
LMNB1-202ENST00000395354 CHIC2Q9UKJ5 165 aa28.65■■■□□ 2.18
LMNB1-202ENST00000395354 FRMPD1Q5SYB0 1578 aa28.64■■■□□ 2.18
LMNB1-202ENST00000395354 PTPRKQ15262 1439 aa28.63■■■□□ 2.17
LMNB1-202ENST00000395354 KDM5CP41229 1560 aa28.63■■■□□ 2.17
LMNB1-202ENST00000395354 C9orf84Q5VXU9 1444 aa28.61■■■□□ 2.17
LMNB1-202ENST00000395354 MLH3Q9UHC1 1453 aa28.59■■■□□ 2.17
LMNB1-202ENST00000395354 CROCC2H7BZ55 1655 aa28.59■■■□□ 2.17
LMNB1-202ENST00000395354 SHANK2Q9UPX8 1470 aa28.59■■■□□ 2.17
LMNB1-202ENST00000395354 RTEL1-TNFRSF6BF6WH68 1400 aa28.58■■■□□ 2.17
LMNB1-202ENST00000395354 SETD5Q9C0A6 1442 aa28.57■■■□□ 2.16
LMNB1-202ENST00000395354 ZMYM4Q5VZL5 1548 aa28.57■■■□□ 2.16
LMNB1-202ENST00000395354 CLSPNQ9HAW4 1339 aa28.57■■■□□ 2.16
LMNB1-202ENST00000395354 MAST1Q9Y2H9 1570 aa28.56■■■□□ 2.16
LMNB1-202ENST00000395354 MAGI2Q86UL8 1455 aa28.55■■■□□ 2.16
LMNB1-202ENST00000395354 HECW2Q9P2P5 1572 aa28.55■■■□□ 2.16
LMNB1-202ENST00000395354 ATP7AQ04656 1500 aa28.54■■■□□ 2.16
LMNB1-202ENST00000395354 KIDINS220Q9ULH0 1771 aa28.53■■■□□ 2.16
LMNB1-202ENST00000395354 ZFYVE16Q7Z3T8 1539 aa28.53■■■□□ 2.16
LMNB1-202ENST00000395354 INO80Q9ULG1 1556 aaPredicted RBP28.53■■■□□ 2.16
LMNB1-202ENST00000395354 ANKRD30AQ9BXX3 1397 aa28.52■■■□□ 2.16
LMNB1-202ENST00000395354 RRP7BPQ9NSQ0 103 aa28.51■■■□□ 2.15
LMNB1-202ENST00000395354 DHX57Q6P158 1386 aaKnown RBP28.51■■■□□ 2.15
LMNB1-202ENST00000395354 RAB3GAP2Q9H2M9 1393 aa28.51■■■□□ 2.15
LMNB1-202ENST00000395354 NCOA1Q15788 1441 aa28.51■■■□□ 2.15
LMNB1-202ENST00000395354 YEATS2Q9ULM3 1422 aa28.5■■■□□ 2.15
LMNB1-202ENST00000395354 ROCK1Q13464 1354 aa28.49■■■□□ 2.15
LMNB1-202ENST00000395354 ADGRL2O95490 1459 aa28.49■■■□□ 2.15
LMNB1-202ENST00000395354 ADGBQ8N7X0 1667 aa28.47■■■□□ 2.15
LMNB1-202ENST00000395354 KIF15Q9NS87 1388 aa28.44■■■□□ 2.14
LMNB1-202ENST00000395354 PLXNC1O60486 1568 aa28.43■■■□□ 2.14
LMNB1-202ENST00000395354 HFM1A2PYH4 1435 aa28.43■■■□□ 2.14
LMNB1-202ENST00000395354 ATP10AO60312 1499 aa28.42■■■□□ 2.14
LMNB1-202ENST00000395354 ABCA6Q8N139 1617 aa28.42■■■□□ 2.14
LMNB1-202ENST00000395354 DIP2CQ9Y2E4 1556 aa28.42■■■□□ 2.14
LMNB1-202ENST00000395354 ARHGEF40Q8TER5 1519 aa28.39■■■□□ 2.14
LMNB1-202ENST00000395354 A2MP01023 1474 aa28.38■■■□□ 2.13
LMNB1-202ENST00000395354 DHX29Q7Z478 1369 aaKnown RBP28.38■■■□□ 2.13
LMNB1-202ENST00000395354 DUOX2Q9NRD8 1548 aa28.37■■■□□ 2.13
LMNB1-202ENST00000395354 NAIPQ13075 1403 aa28.36■■■□□ 2.13
LMNB1-202ENST00000395354 ANKRD50Q9ULJ7 1429 aa28.33■■■□□ 2.13
LMNB1-202ENST00000395354 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
LMNB1-202ENST00000395354 REREQ9P2R6 1566 aa28.29■■■□□ 2.12
LMNB1-202ENST00000395354 GCC2Q8IWJ2 1684 aa28.28■■■□□ 2.12
LMNB1-202ENST00000395354 KIF3BO15066 747 aa28.28■■■□□ 2.12
LMNB1-202ENST00000395354 ARID4BQ4LE39 1312 aaPredicted RBP28.27■■■□□ 2.12
LMNB1-202ENST00000395354 ACIN1Q9UKV3 1341 aaKnown RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms