RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 CDCA8Q53HL2 280 aa19.27■□□□□ 0.67
VSIR-201ENST00000394957 PRG4Q92954 1404 aaPredicted RBP19.26■□□□□ 0.67
VSIR-201ENST00000394957 SETD5Q9C0A6 1442 aa19.26■□□□□ 0.67
VSIR-201ENST00000394957 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
VSIR-201ENST00000394957 HNRNPMP52272 730 aaKnown RBP eCLIP19.25■□□□□ 0.67
VSIR-201ENST00000394957 HSP90AA1P07900 732 aaKnown RBP19.22■□□□□ 0.67
VSIR-201ENST00000394957 KIF3BO15066 747 aa19.22■□□□□ 0.67
VSIR-201ENST00000394957 KIF21BO75037 1637 aa19.21■□□□□ 0.67
VSIR-201ENST00000394957 FAM69CQ0P6D2 419 aa19.2■□□□□ 0.66
VSIR-201ENST00000394957 UPF2Q9HAU5 1272 aaKnown RBP19.19■□□□□ 0.66
VSIR-201ENST00000394957 TIMELESSQ9UNS1 1208 aa19.19■□□□□ 0.66
VSIR-201ENST00000394957 PRXQ9BXM0 1461 aa19.19■□□□□ 0.66
VSIR-201ENST00000394957 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
VSIR-201ENST00000394957 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.18■□□□□ 0.66
VSIR-201ENST00000394957 NUP155O75694 1391 aa19.18■□□□□ 0.66
VSIR-201ENST00000394957 SIN3AQ96ST3 1273 aa19.17■□□□□ 0.66
VSIR-201ENST00000394957 CARD11Q9BXL7 1154 aa19.17■□□□□ 0.66
VSIR-201ENST00000394957 PKD2Q13563 968 aa19.16■□□□□ 0.66
VSIR-201ENST00000394957 SYNJ2O15056 1496 aa19.16■□□□□ 0.66
VSIR-201ENST00000394957 VSIG10Q8N0Z9 540 aa19.16■□□□□ 0.66
VSIR-201ENST00000394957 MAGI1Q96QZ7 1491 aaPredicted RBP19.16■□□□□ 0.66
VSIR-201ENST00000394957 POGKQ9P215 609 aa19.15■□□□□ 0.66
VSIR-201ENST00000394957 URB2Q14146 1524 aaKnown RBP19.15■□□□□ 0.66
VSIR-201ENST00000394957 KIAA0586Q9BVV6 1533 aa19.15■□□□□ 0.66
VSIR-201ENST00000394957 EFCAB5A4FU69 1503 aa19.14■□□□□ 0.65
VSIR-201ENST00000394957 RSPH6AQ9H0K4 717 aa19.12■□□□□ 0.65
VSIR-201ENST00000394957 CASKIN1Q8WXD9 1431 aa19.12■□□□□ 0.65
VSIR-201ENST00000394957 WASHC2CQ9Y4E1 1318 aa19.12■□□□□ 0.65
VSIR-201ENST00000394957 DCAF11Q8TEB1 546 aa19.09■□□□□ 0.65
VSIR-201ENST00000394957 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
VSIR-201ENST00000394957 MPHOSPH9Q99550 1183 aa19.08■□□□□ 0.64
VSIR-201ENST00000394957 MYOM3Q5VTT5 1437 aa19.06■□□□□ 0.64
VSIR-201ENST00000394957 PDE4CQ08493 712 aa19.06■□□□□ 0.64
VSIR-201ENST00000394957 RAB3GAP2Q9H2M9 1393 aa19.05■□□□□ 0.64
VSIR-201ENST00000394957 CUL7Q14999 1698 aa19.04■□□□□ 0.64
VSIR-201ENST00000394957 FYCO1Q9BQS8 1478 aa19.03■□□□□ 0.64
VSIR-201ENST00000394957 A0A0U1RQG5 324 aaPredicted RBP19.03■□□□□ 0.64
VSIR-201ENST00000394957 GRIN2AQ12879 1464 aa19.02■□□□□ 0.64
VSIR-201ENST00000394957 HAP1P54257 671 aaPredicted RBP19.01■□□□□ 0.63
VSIR-201ENST00000394957 NOP58Q9Y2X3 529 aaKnown RBP19.01■□□□□ 0.63
VSIR-201ENST00000394957 EID1Q9Y6B2 187 aa19.01■□□□□ 0.63
VSIR-201ENST00000394957 ARXQ96QS3 562 aa19.01■□□□□ 0.63
VSIR-201ENST00000394957 ANP32BQ92688 251 aaKnown RBP19■□□□□ 0.63
VSIR-201ENST00000394957 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
VSIR-201ENST00000394957 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
VSIR-201ENST00000394957 FANCIQ9NVI1 1328 aa18.97■□□□□ 0.63
VSIR-201ENST00000394957 ZNF608Q9ULD9 1512 aaPredicted RBP18.96■□□□□ 0.63
VSIR-201ENST00000394957 UACAQ9BZF9 1416 aa18.96■□□□□ 0.63
VSIR-201ENST00000394957 NCLP19338 710 aaKnown RBP18.96■□□□□ 0.63
VSIR-201ENST00000394957 TMF1P82094 1093 aa18.96■□□□□ 0.63
VSIR-201ENST00000394957 CFAP53Q96M91 514 aa18.95■□□□□ 0.62
VSIR-201ENST00000394957 LRRC9Q6ZRR7 1453 aa18.95■□□□□ 0.62
VSIR-201ENST00000394957 BIVM-ERCC5R4GMW8 1640 aa18.95■□□□□ 0.62
VSIR-201ENST00000394957 ARAP1Q96P48 1450 aa18.94■□□□□ 0.62
VSIR-201ENST00000394957 FGD6Q6ZV73 1430 aa18.94■□□□□ 0.62
VSIR-201ENST00000394957 ZBTB7CA1YPR0 619 aa18.93■□□□□ 0.62
VSIR-201ENST00000394957 NEUROD2Q15784 382 aa18.92■□□□□ 0.62
VSIR-201ENST00000394957 TROQ12816 1431 aaPredicted RBP18.92■□□□□ 0.62
VSIR-201ENST00000394957 PPM1GO15355 546 aaPredicted RBP18.91■□□□□ 0.62
VSIR-201ENST00000394957 FOXD1Q16676 465 aa18.91■□□□□ 0.62
VSIR-201ENST00000394957 NCOA2Q15596 1464 aa18.9■□□□□ 0.62
VSIR-201ENST00000394957 ARHGAP5Q13017 1502 aa18.9■□□□□ 0.62
VSIR-201ENST00000394957 PLEKHH2Q8IVE3 1493 aa18.9■□□□□ 0.62
VSIR-201ENST00000394957 HECW1Q76N89 1606 aa18.89■□□□□ 0.61
VSIR-201ENST00000394957 MYH16Q9H6N6 1097 aa18.89■□□□□ 0.61
VSIR-201ENST00000394957 LMOD2Q6P5Q4 547 aa18.87■□□□□ 0.61
VSIR-201ENST00000394957 SRPK2P78362 688 aaKnown RBP18.87■□□□□ 0.61
VSIR-201ENST00000394957 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
VSIR-201ENST00000394957 A0A0G2JS52 829 aa18.86■□□□□ 0.61
VSIR-201ENST00000394957 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
VSIR-201ENST00000394957 PDIA4P13667 645 aaKnown RBP18.84■□□□□ 0.61
VSIR-201ENST00000394957 STK26Q9P289 416 aa18.84■□□□□ 0.61
VSIR-201ENST00000394957 EHBP1L1Q8N3D4 1523 aa18.84■□□□□ 0.61
VSIR-201ENST00000394957 TNNT2P45379 298 aaPredicted RBP18.84■□□□□ 0.61
VSIR-201ENST00000394957 ZNF644Q9H582 1327 aaPredicted RBP18.84■□□□□ 0.61
VSIR-201ENST00000394957 HSP90AA2PQ14568 343 aaPredicted RBP18.83■□□□□ 0.61
VSIR-201ENST00000394957 CC2D1BQ5T0F9 858 aaKnown RBP18.82■□□□□ 0.6
VSIR-201ENST00000394957 EIF3AQ14152 1382 aaKnown RBP18.82■□□□□ 0.6
VSIR-201ENST00000394957 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
VSIR-201ENST00000394957 NUDCQ9Y266 331 aa18.81■□□□□ 0.6
VSIR-201ENST00000394957 PHLDB1Q86UU1 1377 aa18.81■□□□□ 0.6
VSIR-201ENST00000394957 MIA2Q96PC5 1412 aa18.81■□□□□ 0.6
VSIR-201ENST00000394957 AFAP1Q8N556 730 aa18.81■□□□□ 0.6
VSIR-201ENST00000394957 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
VSIR-201ENST00000394957 NAP1L5Q96NT1 182 aaPredicted RBP18.79■□□□□ 0.6
VSIR-201ENST00000394957 SAFB2Q14151 953 aaKnown RBP eCLIP18.78■□□□□ 0.6
VSIR-201ENST00000394957 HDGFL2Q7Z4V5 671 aaPredicted RBP18.77■□□□□ 0.6
VSIR-201ENST00000394957 ANKRD50Q9ULJ7 1429 aa18.77■□□□□ 0.6
VSIR-201ENST00000394957 EPRSP07814 1512 aaKnown RBP18.76■□□□□ 0.59
VSIR-201ENST00000394957 ZMYND15Q9H091 742 aa18.76■□□□□ 0.59
VSIR-201ENST00000394957 LAS1LQ9Y4W2 734 aaKnown RBP18.76■□□□□ 0.59
VSIR-201ENST00000394957 L3MBTL2Q969R5 705 aa18.75■□□□□ 0.59
VSIR-201ENST00000394957 STAC3Q96MF2 364 aa18.75■□□□□ 0.59
VSIR-201ENST00000394957 B4GALNT3Q6L9W6 998 aa18.74■□□□□ 0.59
VSIR-201ENST00000394957 WDR62O43379 1518 aa18.74■□□□□ 0.59
VSIR-201ENST00000394957 FRAT1Q92837 279 aaPredicted RBP18.74■□□□□ 0.59
VSIR-201ENST00000394957 PPP4R2Q9NY27 417 aa18.74■□□□□ 0.59
VSIR-201ENST00000394957 RGS3P49796 1198 aa18.74■□□□□ 0.59
VSIR-201ENST00000394957 FTSJ3Q8IY81 847 aaKnown RBP18.74■□□□□ 0.59
VSIR-201ENST00000394957 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms