RNA–Protein interactions for RNA: ENST00000393488.2

PHYKPL-203, Transcript of 5-phosphohydroxy-L-lysine phospho-lyase, humanhuman

TSL 3

Gene PHYKPL, Length 1,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHYKPL-203ENST00000393488 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
PHYKPL-203ENST00000393488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.45■■□□□ 1.18
PHYKPL-203ENST00000393488 HNRNPUL2Q1KMD3 747 aaKnown RBP22.45■■□□□ 1.18
PHYKPL-203ENST00000393488 P3H3Q8IVL6 736 aa22.45■■□□□ 1.18
PHYKPL-203ENST00000393488 CFAP74Q9C0B2 1584 aa22.45■■□□□ 1.18
PHYKPL-203ENST00000393488 HECW1Q76N89 1606 aa22.42■■□□□ 1.18
PHYKPL-203ENST00000393488 RAPGEF6Q8TEU7 1601 aa22.42■■□□□ 1.18
PHYKPL-203ENST00000393488 ATP10AO60312 1499 aa22.38■■□□□ 1.17
PHYKPL-203ENST00000393488 NUP153P49790 1475 aaKnown RBP22.35■■□□□ 1.17
PHYKPL-203ENST00000393488 C9orf84Q5VXU9 1444 aa22.35■■□□□ 1.17
PHYKPL-203ENST00000393488 PLEKHD1A6NEE1 506 aa22.35■■□□□ 1.17
PHYKPL-203ENST00000393488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.35■■□□□ 1.17
PHYKPL-203ENST00000393488 PRXQ9BXM0 1461 aa22.34■■□□□ 1.17
PHYKPL-203ENST00000393488 UBAP1LF5GYI3 381 aa22.31■■□□□ 1.16
PHYKPL-203ENST00000393488 SCAPERQ9BY12 1400 aa22.31■■□□□ 1.16
PHYKPL-203ENST00000393488 SAMD9Q5K651 1589 aa22.3■■□□□ 1.16
PHYKPL-203ENST00000393488 NCOA1Q15788 1441 aa22.29■■□□□ 1.16
PHYKPL-203ENST00000393488 MED1Q15648 1581 aaPredicted RBP22.24■■□□□ 1.15
PHYKPL-203ENST00000393488 C3P01024 1663 aa22.23■■□□□ 1.15
PHYKPL-203ENST00000393488 TRAPPC8Q9Y2L5 1435 aa22.23■■□□□ 1.15
PHYKPL-203ENST00000393488 PLCH2O75038 1416 aa22.22■■□□□ 1.15
PHYKPL-203ENST00000393488 ZNF335Q9H4Z2 1342 aaPredicted RBP22.2■■□□□ 1.14
PHYKPL-203ENST00000393488 HSPA1LP34931 641 aa22.15■■□□□ 1.14
PHYKPL-203ENST00000393488 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
PHYKPL-203ENST00000393488 REREQ9P2R6 1566 aa22.12■■□□□ 1.13
PHYKPL-203ENST00000393488 EFCAB2Q5VUJ9 269 aa22.12■■□□□ 1.13
PHYKPL-203ENST00000393488 NCKAP5LQ9HCH0 1330 aa22.11■■□□□ 1.13
PHYKPL-203ENST00000393488 ZNF518AQ6AHZ1 1483 aa22.11■■□□□ 1.13
PHYKPL-203ENST00000393488 KDM5CP41229 1560 aa22.1■■□□□ 1.13
PHYKPL-203ENST00000393488 ESF1Q9H501 851 aaKnown RBP22.1■■□□□ 1.13
PHYKPL-203ENST00000393488 DIP2CQ9Y2E4 1556 aa22.09■■□□□ 1.13
PHYKPL-203ENST00000393488 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
PHYKPL-203ENST00000393488 AGLP35573 1532 aa22.08■■□□□ 1.13
PHYKPL-203ENST00000393488 PHF23Q9BUL5 403 aaPredicted RBP22.06■■□□□ 1.12
PHYKPL-203ENST00000393488 NPATQ14207 1427 aa22.05■■□□□ 1.12
PHYKPL-203ENST00000393488 CNTLNQ9NXG0 1405 aa22.05■■□□□ 1.12
PHYKPL-203ENST00000393488 PKD2Q13563 968 aa22.04■■□□□ 1.12
PHYKPL-203ENST00000393488 MYO5CQ9NQX4 1742 aa22.03■■□□□ 1.12
PHYKPL-203ENST00000393488 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
PHYKPL-203ENST00000393488 SCAF1Q9H7N4 1312 aaKnown RBP22.03■■□□□ 1.12
PHYKPL-203ENST00000393488 PIP4K2BP78356 416 aa22.02■■□□□ 1.12
PHYKPL-203ENST00000393488 ABCA6Q8N139 1617 aa22.02■■□□□ 1.11
PHYKPL-203ENST00000393488 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
PHYKPL-203ENST00000393488 PLA2R1Q13018 1463 aa22.01■■□□□ 1.11
PHYKPL-203ENST00000393488 MLH3Q9UHC1 1453 aa22.01■■□□□ 1.11
PHYKPL-203ENST00000393488 TOM1O60784 492 aa22■■□□□ 1.11
PHYKPL-203ENST00000393488 TCOF1Q13428 1488 aaKnown RBP21.99■■□□□ 1.11
PHYKPL-203ENST00000393488 RANGAP1P46060 587 aaPredicted RBP21.99■■□□□ 1.11
PHYKPL-203ENST00000393488 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
PHYKPL-203ENST00000393488 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
PHYKPL-203ENST00000393488 ZMYM3Q14202 1370 aa21.95■■□□□ 1.1
PHYKPL-203ENST00000393488 ZNF142P52746 1687 aaPredicted RBP21.93■■□□□ 1.1
PHYKPL-203ENST00000393488 ARHGAP5Q13017 1502 aa21.92■■□□□ 1.1
PHYKPL-203ENST00000393488 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
PHYKPL-203ENST00000393488 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
PHYKPL-203ENST00000393488 MYO3AQ8NEV4 1616 aa21.89■■□□□ 1.09
PHYKPL-203ENST00000393488 CPS1P31327 1500 aa21.89■■□□□ 1.09
PHYKPL-203ENST00000393488 KIF14Q15058 1648 aa21.88■■□□□ 1.09
PHYKPL-203ENST00000393488 CEP170BQ9Y4F5 1589 aaPredicted RBP21.88■■□□□ 1.09
PHYKPL-203ENST00000393488 KIDINS220Q9ULH0 1771 aa21.85■■□□□ 1.09
PHYKPL-203ENST00000393488 RGS17Q9UGC6 210 aaPredicted RBP21.84■■□□□ 1.09
PHYKPL-203ENST00000393488 CDK11AQ9UQ88 783 aaPredicted RBP21.84■■□□□ 1.09
PHYKPL-203ENST00000393488 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
PHYKPL-203ENST00000393488 PTPRKQ15262 1439 aa21.83■■□□□ 1.09
PHYKPL-203ENST00000393488 SHANK2Q9UPX8 1470 aa21.83■■□□□ 1.08
PHYKPL-203ENST00000393488 CDC42BPBQ9Y5S2 1711 aa21.81■■□□□ 1.08
PHYKPL-203ENST00000393488 TROQ12816 1431 aaPredicted RBP21.8■■□□□ 1.08
PHYKPL-203ENST00000393488 ABCC1P33527 1531 aa21.8■■□□□ 1.08
PHYKPL-203ENST00000393488 CLTCQ00610 1675 aaKnown RBP21.79■■□□□ 1.08
PHYKPL-203ENST00000393488 ITSN2Q9NZM3 1697 aa21.78■■□□□ 1.08
PHYKPL-203ENST00000393488 ATP1B4Q9UN42 357 aaPredicted RBP21.76■■□□□ 1.07
PHYKPL-203ENST00000393488 DNMT1P26358 1616 aaKnown RBP21.75■■□□□ 1.07
PHYKPL-203ENST00000393488 A2ML1A8K2U0 1454 aa21.75■■□□□ 1.07
PHYKPL-203ENST00000393488 NEURL4Q96JN8 1562 aa21.74■■□□□ 1.07
PHYKPL-203ENST00000393488 CLIP1P30622 1438 aa21.73■■□□□ 1.07
PHYKPL-203ENST00000393488 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
PHYKPL-203ENST00000393488 VWDEQ8N2E2 1590 aa21.71■■□□□ 1.07
PHYKPL-203ENST00000393488 PREX2Q70Z35 1606 aa21.71■■□□□ 1.07
PHYKPL-203ENST00000393488 SENP3Q9H4L4 574 aaPredicted RBP21.7■■□□□ 1.06
PHYKPL-203ENST00000393488 FMN1Q68DA7 1419 aa21.69■■□□□ 1.06
PHYKPL-203ENST00000393488 SAMD9LQ8IVG5 1584 aa21.69■■□□□ 1.06
PHYKPL-203ENST00000393488 POTEAQ6S8J7 498 aa21.65■■□□□ 1.06
PHYKPL-203ENST00000393488 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
PHYKPL-203ENST00000393488 GGT6Q6P531 493 aa21.64■■□□□ 1.05
PHYKPL-203ENST00000393488 SPAG9O60271 1321 aaKnown RBP21.63■■□□□ 1.05
PHYKPL-203ENST00000393488 ANKLE2Q86XL3 938 aa21.62■■□□□ 1.05
PHYKPL-203ENST00000393488 A2MP01023 1474 aa21.61■■□□□ 1.05
PHYKPL-203ENST00000393488 LRRC7Q96NW7 1537 aa21.6■■□□□ 1.05
PHYKPL-203ENST00000393488 MED14O60244 1454 aa21.59■■□□□ 1.05
PHYKPL-203ENST00000393488 LRRIQ1Q96JM4 1722 aa21.59■■□□□ 1.05
PHYKPL-203ENST00000393488 RNF17Q9BXT8 1623 aaKnown RBP21.58■■□□□ 1.05
PHYKPL-203ENST00000393488 CDC42BPAQ5VT25 1732 aa21.58■■□□□ 1.05
PHYKPL-203ENST00000393488 EEA1Q15075 1411 aa21.58■■□□□ 1.05
PHYKPL-203ENST00000393488 ATP7AQ04656 1500 aa21.58■■□□□ 1.04
PHYKPL-203ENST00000393488 NPHP4O75161 1426 aaPredicted RBP21.57■■□□□ 1.04
PHYKPL-203ENST00000393488 STRCP1A6NGW2 1772 aa21.56■■□□□ 1.04
PHYKPL-203ENST00000393488 TNRQ92752 1358 aa21.56■■□□□ 1.04
PHYKPL-203ENST00000393488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.56■■□□□ 1.04
PHYKPL-203ENST00000393488 SYCP2Q9BX26 1530 aa21.55■■□□□ 1.04
PHYKPL-203ENST00000393488 HNRNPMP52272 730 aaKnown RBP eCLIP21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms