RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 ANP32EQ9BTT0 268 aa16.38■□□□□ 0.21
CLTC-202ENST00000393043 MORC1Q86VD1 984 aa16.38■□□□□ 0.21
CLTC-202ENST00000393043 U2SURPO15042 1029 aaKnown RBP16.37■□□□□ 0.21
CLTC-202ENST00000393043 HNRNPMP52272 730 aaKnown RBP eCLIP16.36■□□□□ 0.21
CLTC-202ENST00000393043 SRPK2P78362 688 aaKnown RBP16.36■□□□□ 0.21
CLTC-202ENST00000393043 GAPVD1Q14C86 1478 aa16.36■□□□□ 0.21
CLTC-202ENST00000393043 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
CLTC-202ENST00000393043 LAS1LQ9Y4W2 734 aaKnown RBP16.35■□□□□ 0.21
CLTC-202ENST00000393043 EIF3AQ14152 1382 aaKnown RBP16.35■□□□□ 0.21
CLTC-202ENST00000393043 CASC1Q6TDU7 716 aa16.34■□□□□ 0.21
CLTC-202ENST00000393043 SPAG9O60271 1321 aaKnown RBP16.33■□□□□ 0.21
CLTC-202ENST00000393043 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.21
CLTC-202ENST00000393043 GOLGA6L22H0YM25 854 aa16.31■□□□□ 0.2
CLTC-202ENST00000393043 KIF3BO15066 747 aa16.31■□□□□ 0.2
CLTC-202ENST00000393043 PLEKHG5O94827 1062 aa16.31■□□□□ 0.2
CLTC-202ENST00000393043 KIF21BO75037 1637 aa16.29■□□□□ 0.2
CLTC-202ENST00000393043 RGS3P49796 1198 aa16.29■□□□□ 0.2
CLTC-202ENST00000393043 HDGFL2Q7Z4V5 671 aaPredicted RBP16.29■□□□□ 0.2
CLTC-202ENST00000393043 MLECQ14165 292 aa16.28■□□□□ 0.2
CLTC-202ENST00000393043 PTPRGP23470 1445 aa16.28■□□□□ 0.2
CLTC-202ENST00000393043 HAP1P54257 671 aaPredicted RBP16.28■□□□□ 0.2
CLTC-202ENST00000393043 RAD54L2Q9Y4B4 1467 aa16.28■□□□□ 0.2
CLTC-202ENST00000393043 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
CLTC-202ENST00000393043 NCLP19338 710 aaKnown RBP16.26■□□□□ 0.19
CLTC-202ENST00000393043 CUX1P39880 1505 aa16.26■□□□□ 0.19
CLTC-202ENST00000393043 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
CLTC-202ENST00000393043 NLRP13Q86W25 1043 aa16.25■□□□□ 0.19
CLTC-202ENST00000393043 CFTRP13569 1480 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 CCDC144AA2RUR9 1427 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 ARXQ96QS3 562 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 STK26Q9P289 416 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 A0A0G2JS52 829 aa16.24■□□□□ 0.19
CLTC-202ENST00000393043 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
CLTC-202ENST00000393043 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
CLTC-202ENST00000393043 FGD6Q6ZV73 1430 aa16.23■□□□□ 0.19
CLTC-202ENST00000393043 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
CLTC-202ENST00000393043 LMOD2Q6P5Q4 547 aa16.22■□□□□ 0.19
CLTC-202ENST00000393043 LRRC9Q6ZRR7 1453 aa16.21■□□□□ 0.19
CLTC-202ENST00000393043 PDE3BQ13370 1112 aa16.21■□□□□ 0.19
CLTC-202ENST00000393043 CASKIN1Q8WXD9 1431 aa16.2■□□□□ 0.18
CLTC-202ENST00000393043 KIF15Q9NS87 1388 aa16.2■□□□□ 0.18
CLTC-202ENST00000393043 CALD1Q05682 793 aaKnown RBP16.2■□□□□ 0.18
CLTC-202ENST00000393043 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
CLTC-202ENST00000393043 UACAQ9BZF9 1416 aa16.19■□□□□ 0.18
CLTC-202ENST00000393043 IPO8O15397 1037 aaKnown RBP16.19■□□□□ 0.18
CLTC-202ENST00000393043 SYNJ1O43426 1573 aa16.19■□□□□ 0.18
CLTC-202ENST00000393043 U2AF1L5P0DN76 240 aaPredicted RBP16.18■□□□□ 0.18
CLTC-202ENST00000393043 U2AF1Q01081 240 aaKnown RBP eCLIP16.18■□□□□ 0.189e-7■■■■□ 24.1
CLTC-202ENST00000393043 TERF2IPQ9NYB0 399 aa16.17■□□□□ 0.18
CLTC-202ENST00000393043 HMGXB3Q12766 1538 aa16.16■□□□□ 0.18
CLTC-202ENST00000393043 CFAP44Q96MT7 982 aa16.16■□□□□ 0.18
CLTC-202ENST00000393043 ST20-MTHFSA0A0A6YYL1 179 aa16.16■□□□□ 0.18
CLTC-202ENST00000393043 MYBBP1AQ9BQG0 1328 aaKnown RBP16.15■□□□□ 0.18
CLTC-202ENST00000393043 TRIM44Q96DX7 344 aaPredicted RBP16.15■□□□□ 0.18
CLTC-202ENST00000393043 FYCO1Q9BQS8 1478 aa16.15■□□□□ 0.18
CLTC-202ENST00000393043 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
CLTC-202ENST00000393043 RTF1Q92541 710 aaKnown RBP16.15■□□□□ 0.18
CLTC-202ENST00000393043 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
CLTC-202ENST00000393043 GOLGA2Q08379 1002 aa16.14■□□□□ 0.17
CLTC-202ENST00000393043 TOP2BQ02880 1626 aa16.13■□□□□ 0.17
CLTC-202ENST00000393043 TCERG1O14776 1098 aaKnown RBP16.13■□□□□ 0.17
CLTC-202ENST00000393043 USP47Q96K76 1375 aa16.13■□□□□ 0.17
CLTC-202ENST00000393043 GRIN2BQ13224 1484 aa16.12■□□□□ 0.17
CLTC-202ENST00000393043 PRXQ9BXM0 1461 aa16.12■□□□□ 0.17
CLTC-202ENST00000393043 PRKRIP1Q9H875 184 aaPredicted RBP16.12■□□□□ 0.17
CLTC-202ENST00000393043 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
CLTC-202ENST00000393043 OS9Q13438 667 aaPredicted RBP16.11■□□□□ 0.17
CLTC-202ENST00000393043 AQRO60306 1485 aaKnown RBP eCLIP16.11■□□□□ 0.172e-7■■■■■ 28.6
CLTC-202ENST00000393043 SOX12O15370 315 aa16.11■□□□□ 0.17
CLTC-202ENST00000393043 NCOA2Q15596 1464 aa16.1■□□□□ 0.17
CLTC-202ENST00000393043 HSP90AB1P08238 724 aaKnown RBP16.1■□□□□ 0.17
CLTC-202ENST00000393043 RRBP1Q9P2E9 1410 aaKnown RBP16.1■□□□□ 0.17
CLTC-202ENST00000393043 RWDD1Q9H446 243 aaPredicted RBP16.1■□□□□ 0.17
CLTC-202ENST00000393043 EFCAB5A4FU69 1503 aa16.1■□□□□ 0.17
CLTC-202ENST00000393043 HSCBQ8IWL3 235 aa16.08■□□□□ 0.16
CLTC-202ENST00000393043 STAC3Q96MF2 364 aa16.08■□□□□ 0.16
CLTC-202ENST00000393043 CHMP4AQ9BY43 222 aa16.08■□□□□ 0.16
CLTC-202ENST00000393043 PANK3Q9H999 370 aa16.08■□□□□ 0.16
CLTC-202ENST00000393043 VGFO15240 615 aaPredicted RBP16.07■□□□□ 0.16
CLTC-202ENST00000393043 PMFBP1Q8TBY8 1022 aa16.06■□□□□ 0.16
CLTC-202ENST00000393043 GLIPR1L2Q4G1C9 344 aa16.06■□□□□ 0.16
CLTC-202ENST00000393043 EID1Q9Y6B2 187 aa16.05■□□□□ 0.16
CLTC-202ENST00000393043 TRAK1Q9UPV9 953 aa16.05■□□□□ 0.16
CLTC-202ENST00000393043 ZBED9Q6R2W3 1325 aa16.04■□□□□ 0.16
CLTC-202ENST00000393043 MCCP23508 829 aa16.03■□□□□ 0.16
CLTC-202ENST00000393043 ZRSR1Q15695 479 aaKnown RBP16.03■□□□□ 0.16
CLTC-202ENST00000393043 ZNF644Q9H582 1327 aaPredicted RBP16.03■□□□□ 0.16
CLTC-202ENST00000393043 ANKRD50Q9ULJ7 1429 aa16.03■□□□□ 0.16
CLTC-202ENST00000393043 LMOD3Q0VAK6 560 aa16.03■□□□□ 0.16
CLTC-202ENST00000393043 ITPRIPQ8IWB1 547 aa16.03■□□□□ 0.16
CLTC-202ENST00000393043 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.16
CLTC-202ENST00000393043 OSCARQ8IYS5 282 aa16.02■□□□□ 0.15
CLTC-202ENST00000393043 TOPBP1Q92547 1522 aa16.02■□□□□ 0.15
CLTC-202ENST00000393043 PRDM2Q13029 1718 aa16.01■□□□□ 0.15
CLTC-202ENST00000393043 KCNJ4P48050 445 aa16.01■□□□□ 0.15
CLTC-202ENST00000393043 EVC2Q86UK5 1308 aa16.01■□□□□ 0.15
CLTC-202ENST00000393043 CCDC146Q8IYE0 955 aa16.01■□□□□ 0.15
CLTC-202ENST00000393043 SMC4Q9NTJ3 1288 aa16.01■□□□□ 0.15
CLTC-202ENST00000393043 MRC2Q9UBG0 1479 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms