RNA–Protein interactions for RNA: ENST00000381873.7

SNPH-202, Transcript of syntaphilin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNPH, Length 4,995 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-202ENST00000381873 GRIN2BQ13224 1484 aa19.31■□□□□ 0.68
SNPH-202ENST00000381873 ANP32EQ9BTT0 268 aa19.31■□□□□ 0.68
SNPH-202ENST00000381873 CC2D1BQ5T0F9 858 aaKnown RBP19.31■□□□□ 0.68
SNPH-202ENST00000381873 CHMP4BQ9H444 224 aaKnown RBP19.31■□□□□ 0.68
SNPH-202ENST00000381873 RUSC2Q8N2Y8 1516 aa19.31■□□□□ 0.68
SNPH-202ENST00000381873 PNNQ9H307 717 aaKnown RBP19.3■□□□□ 0.68
SNPH-202ENST00000381873 FRAT1Q92837 279 aaPredicted RBP19.3■□□□□ 0.68
SNPH-202ENST00000381873 PTPRGP23470 1445 aa19.29■□□□□ 0.68
SNPH-202ENST00000381873 IFT140Q96RY7 1462 aa19.29■□□□□ 0.68
SNPH-202ENST00000381873 RAD54L2Q9Y4B4 1467 aa19.29■□□□□ 0.68
SNPH-202ENST00000381873 GGT6Q6P531 493 aa19.29■□□□□ 0.68
SNPH-202ENST00000381873 MS4A1P11836 297 aa19.28■□□□□ 0.68
SNPH-202ENST00000381873 KIF21BO75037 1637 aa19.27■□□□□ 0.68
SNPH-202ENST00000381873 SRPK2P78362 688 aaKnown RBP19.27■□□□□ 0.68
SNPH-202ENST00000381873 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
SNPH-202ENST00000381873 TOP2BQ02880 1626 aa19.26■□□□□ 0.67
SNPH-202ENST00000381873 NPHP1O15259 732 aa19.25■□□□□ 0.67
SNPH-202ENST00000381873 ZRSR1Q15695 479 aaKnown RBP19.24■□□□□ 0.67
SNPH-202ENST00000381873 LAMC3Q9Y6N6 1575 aa19.22■□□□□ 0.67
SNPH-202ENST00000381873 OSCARQ8IYS5 282 aa19.22■□□□□ 0.67
SNPH-202ENST00000381873 RGS3P49796 1198 aa19.21■□□□□ 0.67
SNPH-202ENST00000381873 SOX12O15370 315 aa19.21■□□□□ 0.67
SNPH-202ENST00000381873 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.67
SNPH-202ENST00000381873 OS9Q13438 667 aaPredicted RBP19.2■□□□□ 0.66
SNPH-202ENST00000381873 DNMBPQ6XZF7 1577 aa19.2■□□□□ 0.66
SNPH-202ENST00000381873 PKD2Q13563 968 aa19.2■□□□□ 0.66
SNPH-202ENST00000381873 TOPBP1Q92547 1522 aa19.2■□□□□ 0.66
SNPH-202ENST00000381873 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
SNPH-202ENST00000381873 TRIM44Q96DX7 344 aaPredicted RBP19.19■□□□□ 0.66
SNPH-202ENST00000381873 PPP4R2Q9NY27 417 aa19.19■□□□□ 0.66
SNPH-202ENST00000381873 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
SNPH-202ENST00000381873 RAB3GAP2Q9H2M9 1393 aa19.18■□□□□ 0.66
SNPH-202ENST00000381873 CUX1P39880 1505 aa19.16■□□□□ 0.66
SNPH-202ENST00000381873 STK26Q9P289 416 aa19.15■□□□□ 0.66
SNPH-202ENST00000381873 GLIPR1L2Q4G1C9 344 aa19.14■□□□□ 0.65
SNPH-202ENST00000381873 SPAG9O60271 1321 aaKnown RBP19.14■□□□□ 0.65
SNPH-202ENST00000381873 FGD1P98174 961 aa19.14■□□□□ 0.65
SNPH-202ENST00000381873 NUP155O75694 1391 aa19.14■□□□□ 0.65
SNPH-202ENST00000381873 EFCAB5A4FU69 1503 aa19.14■□□□□ 0.65
SNPH-202ENST00000381873 AQRO60306 1485 aaKnown RBP eCLIP19.14■□□□□ 0.65
SNPH-202ENST00000381873 KCNJ4P48050 445 aa19.12■□□□□ 0.65
SNPH-202ENST00000381873 MPHOSPH9Q99550 1183 aa19.12■□□□□ 0.65
SNPH-202ENST00000381873 HDGFL2Q7Z4V5 671 aaPredicted RBP19.12■□□□□ 0.65
SNPH-202ENST00000381873 NESP48681 1621 aa19.11■□□□□ 0.65
SNPH-202ENST00000381873 GOLGA2Q08379 1002 aa19.1■□□□□ 0.65
SNPH-202ENST00000381873 POLA1P09884 1462 aaPredicted RBP19.1■□□□□ 0.65
SNPH-202ENST00000381873 CASKIN1Q8WXD9 1431 aa19.1■□□□□ 0.65
SNPH-202ENST00000381873 RTF1Q92541 710 aaKnown RBP19.09■□□□□ 0.65
SNPH-202ENST00000381873 PTMAP06454 111 aaKnown RBP19.09■□□□□ 0.65
SNPH-202ENST00000381873 HSPA5P11021 654 aaKnown RBP19.08■□□□□ 0.65
SNPH-202ENST00000381873 PRXQ9BXM0 1461 aa19.08■□□□□ 0.65
SNPH-202ENST00000381873 TPRNQ4KMQ1 711 aa19.07■□□□□ 0.64
SNPH-202ENST00000381873 FOXD1Q16676 465 aa19.06■□□□□ 0.64
SNPH-202ENST00000381873 MYOM3Q5VTT5 1437 aa19.05■□□□□ 0.64
SNPH-202ENST00000381873 FYCO1Q9BQS8 1478 aa19.05■□□□□ 0.64
SNPH-202ENST00000381873 CCER2I3L3R5 266 aa19.04■□□□□ 0.64
SNPH-202ENST00000381873 KIF3BO15066 747 aa19.03■□□□□ 0.64
SNPH-202ENST00000381873 HNRNPMP52272 730 aaKnown RBP eCLIP19.03■□□□□ 0.64
SNPH-202ENST00000381873 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
SNPH-202ENST00000381873 ABCA10Q8WWZ4 1543 aa19.03■□□□□ 0.64
SNPH-202ENST00000381873 TAOK2Q9UL54 1235 aa19.03■□□□□ 0.64
SNPH-202ENST00000381873 PAK3O75914 559 aaPredicted RBP19.02■□□□□ 0.64
SNPH-202ENST00000381873 HSP90AB1P08238 724 aaKnown RBP19.02■□□□□ 0.63
SNPH-202ENST00000381873 KTN1Q86UP2 1357 aaKnown RBP19.01■□□□□ 0.63
SNPH-202ENST00000381873 UNC13AQ9UPW8 1703 aa19.01■□□□□ 0.63
SNPH-202ENST00000381873 U2AF1L5P0DN76 240 aaPredicted RBP19.01■□□□□ 0.63
SNPH-202ENST00000381873 U2AF1Q01081 240 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNPH-202ENST00000381873 NAP1L2Q9ULW6 460 aaPredicted RBP19.01■□□□□ 0.63
SNPH-202ENST00000381873 IPO8O15397 1037 aaKnown RBP19■□□□□ 0.63
SNPH-202ENST00000381873 EIF3AQ14152 1382 aaKnown RBP19■□□□□ 0.63
SNPH-202ENST00000381873 TULP1O00294 542 aaPredicted RBP19■□□□□ 0.63
SNPH-202ENST00000381873 CALD1Q05682 793 aaKnown RBP18.98■□□□□ 0.63
SNPH-202ENST00000381873 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
SNPH-202ENST00000381873 UACAQ9BZF9 1416 aa18.97■□□□□ 0.63
SNPH-202ENST00000381873 LRRC9Q6ZRR7 1453 aa18.97■□□□□ 0.63
SNPH-202ENST00000381873 ROCK2O75116 1388 aaKnown RBP18.97■□□□□ 0.63
SNPH-202ENST00000381873 SYNJ2O15056 1496 aa18.97■□□□□ 0.63
SNPH-202ENST00000381873 FGD6Q6ZV73 1430 aa18.96■□□□□ 0.63
SNPH-202ENST00000381873 DNTTIP2Q5QJE6 756 aaKnown RBP18.95■□□□□ 0.62
SNPH-202ENST00000381873 PLCB2Q00722 1185 aa18.95■□□□□ 0.62
SNPH-202ENST00000381873 CHMP4AQ9BY43 222 aa18.95■□□□□ 0.62
SNPH-202ENST00000381873 CFAP44Q96MT7 982 aa18.94■□□□□ 0.62
SNPH-202ENST00000381873 RALBP1Q15311 655 aa18.94■□□□□ 0.62
SNPH-202ENST00000381873 GOLGA6L4A6NEF3 574 aa18.94■□□□□ 0.62
SNPH-202ENST00000381873 MCCP23508 829 aa18.94■□□□□ 0.62
SNPH-202ENST00000381873 CUL7Q14999 1698 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 EID1Q9Y6B2 187 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 TERF2IPQ9NYB0 399 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 WASHC2CQ9Y4E1 1318 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 SNAPC4Q5SXM2 1469 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 HSCBQ8IWL3 235 aa18.92■□□□□ 0.62
SNPH-202ENST00000381873 PRG4Q92954 1404 aaPredicted RBP18.9■□□□□ 0.62
SNPH-202ENST00000381873 ERICH6BQ5W0A0 696 aa18.9■□□□□ 0.62
SNPH-202ENST00000381873 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
SNPH-202ENST00000381873 KIAA0586Q9BVV6 1533 aa18.89■□□□□ 0.62
SNPH-202ENST00000381873 STAC3Q96MF2 364 aa18.88■□□□□ 0.61
SNPH-202ENST00000381873 APBB1O00213 710 aa18.88■□□□□ 0.61
SNPH-202ENST00000381873 NRDCO43847 1150 aa18.88■□□□□ 0.61
SNPH-202ENST00000381873 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
SNPH-202ENST00000381873 NOP58Q9Y2X3 529 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms