RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 FANCAO15360 1455 aa23.96■■□□□ 1.43
PDGFB-202ENST00000381551 CDC42BPBQ9Y5S2 1711 aa23.95■■□□□ 1.42
PDGFB-202ENST00000381551 NEO1Q92859 1461 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 PHLDB1Q86UU1 1377 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 ARHGAP5Q13017 1502 aa23.94■■□□□ 1.42
PDGFB-202ENST00000381551 PREX2Q70Z35 1606 aa23.93■■□□□ 1.42
PDGFB-202ENST00000381551 AKNAQ7Z591 1439 aa23.93■■□□□ 1.42
PDGFB-202ENST00000381551 ZNF777Q9ULD5 760 aaPredicted RBP23.91■■□□□ 1.42
PDGFB-202ENST00000381551 MYOM3Q5VTT5 1437 aa23.9■■□□□ 1.42
PDGFB-202ENST00000381551 ZNF644Q9H582 1327 aaPredicted RBP23.87■■□□□ 1.41
PDGFB-202ENST00000381551 ITSN2Q9NZM3 1697 aa23.87■■□□□ 1.41
PDGFB-202ENST00000381551 COL17A1Q9UMD9 1497 aaPredicted RBP23.87■■□□□ 1.41
PDGFB-202ENST00000381551 MIA2Q96PC5 1412 aa23.86■■□□□ 1.41
PDGFB-202ENST00000381551 CFAP74Q9C0B2 1584 aa23.86■■□□□ 1.41
PDGFB-202ENST00000381551 SCAPERQ9BY12 1400 aa23.84■■□□□ 1.41
PDGFB-202ENST00000381551 ADGRL1O94910 1474 aa23.83■■□□□ 1.41
PDGFB-202ENST00000381551 RAPGEF3O95398 923 aa23.81■■□□□ 1.4
PDGFB-202ENST00000381551 HNRNPMP52272 730 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDGFB-202ENST00000381551 SAMD9LQ8IVG5 1584 aa23.81■■□□□ 1.4
PDGFB-202ENST00000381551 FGD6Q6ZV73 1430 aa23.8■■□□□ 1.4
PDGFB-202ENST00000381551 KIAA1107Q9UPP5 1409 aa23.8■■□□□ 1.4
PDGFB-202ENST00000381551 ARHGEF12Q9NZN5 1544 aa23.79■■□□□ 1.4
PDGFB-202ENST00000381551 DENND4BO75064 1496 aaPredicted RBP23.78■■□□□ 1.4
PDGFB-202ENST00000381551 PLEKHH2Q8IVE3 1493 aa23.78■■□□□ 1.4
PDGFB-202ENST00000381551 KDM6BO15054 1643 aa23.77■■□□□ 1.4
PDGFB-202ENST00000381551 ABCC1P33527 1531 aa23.76■■□□□ 1.39
PDGFB-202ENST00000381551 AFAP1Q8N556 730 aa23.76■■□□□ 1.39
PDGFB-202ENST00000381551 CAMSAP2Q08AD1 1489 aa23.75■■□□□ 1.39
PDGFB-202ENST00000381551 TRAPPC8Q9Y2L5 1435 aa23.74■■□□□ 1.39
PDGFB-202ENST00000381551 MBD5Q9P267 1494 aa23.74■■□□□ 1.39
PDGFB-202ENST00000381551 RSPH4AQ5TD94 716 aa23.73■■□□□ 1.39
PDGFB-202ENST00000381551 TCOF1Q13428 1488 aaKnown RBP23.73■■□□□ 1.39
PDGFB-202ENST00000381551 PTPN23Q9H3S7 1636 aa23.73■■□□□ 1.39
PDGFB-202ENST00000381551 POGZQ7Z3K3 1410 aa23.72■■□□□ 1.39
PDGFB-202ENST00000381551 SYCP2Q9BX26 1530 aa23.72■■□□□ 1.39
PDGFB-202ENST00000381551 FAM50AQ14320 339 aaKnown RBP23.7■■□□□ 1.38
PDGFB-202ENST00000381551 RICTORQ6R327 1708 aa23.69■■□□□ 1.38
PDGFB-202ENST00000381551 ZNF518AQ6AHZ1 1483 aa23.68■■□□□ 1.38
PDGFB-202ENST00000381551 RRBP1Q9P2E9 1410 aaKnown RBP23.67■■□□□ 1.38
PDGFB-202ENST00000381551 FRMPD1Q5SYB0 1578 aa23.67■■□□□ 1.38
PDGFB-202ENST00000381551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.65■■□□□ 1.38
PDGFB-202ENST00000381551 ARHGEF5Q12774 1597 aa23.64■■□□□ 1.37
PDGFB-202ENST00000381551 TSPY4P0CV99 314 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 TSPY10P0CW01 314 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 KDM5CP41229 1560 aa23.63■■□□□ 1.37
PDGFB-202ENST00000381551 CCDC141Q6ZP82 1450 aa23.62■■□□□ 1.37
PDGFB-202ENST00000381551 SPAG9O60271 1321 aaKnown RBP23.62■■□□□ 1.37
PDGFB-202ENST00000381551 ABCC5O15440 1437 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MAGI2Q86UL8 1455 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MLH3Q9UHC1 1453 aa23.61■■□□□ 1.37
PDGFB-202ENST00000381551 MYT1LQ9UL68 1186 aa23.59■■□□□ 1.37
PDGFB-202ENST00000381551 DAPK1P53355 1430 aa23.58■■□□□ 1.36
PDGFB-202ENST00000381551 RTEL1-TNFRSF6BF6WH68 1400 aa23.56■■□□□ 1.36
PDGFB-202ENST00000381551 DNMT1P26358 1616 aaKnown RBP23.55■■□□□ 1.36
PDGFB-202ENST00000381551 YEATS2Q9ULM3 1422 aa23.55■■□□□ 1.36
PDGFB-202ENST00000381551 ITGAEP38570 1179 aa23.54■■□□□ 1.36
PDGFB-202ENST00000381551 HECW2Q9P2P5 1572 aa23.53■■□□□ 1.36
PDGFB-202ENST00000381551 KIDINS220Q9ULH0 1771 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 PTPRKQ15262 1439 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 C9orf84Q5VXU9 1444 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 CHIC2Q9UKJ5 165 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 ZFYVE16Q7Z3T8 1539 aa23.52■■□□□ 1.36
PDGFB-202ENST00000381551 ATP7AQ04656 1500 aa23.51■■□□□ 1.35
PDGFB-202ENST00000381551 SHANK2Q9UPX8 1470 aa23.5■■□□□ 1.35
PDGFB-202ENST00000381551 INO80Q9ULG1 1556 aaPredicted RBP23.5■■□□□ 1.35
PDGFB-202ENST00000381551 MAST1Q9Y2H9 1570 aa23.5■■□□□ 1.35
PDGFB-202ENST00000381551 ATP10AO60312 1499 aa23.49■■□□□ 1.35
PDGFB-202ENST00000381551 CROCC2H7BZ55 1655 aa23.47■■□□□ 1.35
PDGFB-202ENST00000381551 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 NCOA1Q15788 1441 aa23.45■■□□□ 1.34
PDGFB-202ENST00000381551 ABCA6Q8N139 1617 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 ANKRD30AQ9BXX3 1397 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 RRP7BPQ9NSQ0 103 aa23.44■■□□□ 1.34
PDGFB-202ENST00000381551 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
PDGFB-202ENST00000381551 DHX29Q7Z478 1369 aaKnown RBP23.41■■□□□ 1.34
PDGFB-202ENST00000381551 ROCK1Q13464 1354 aa23.4■■□□□ 1.34
PDGFB-202ENST00000381551 A2MP01023 1474 aa23.4■■□□□ 1.34
PDGFB-202ENST00000381551 PLXNC1O60486 1568 aa23.39■■□□□ 1.33
PDGFB-202ENST00000381551 KIF15Q9NS87 1388 aa23.39■■□□□ 1.33
PDGFB-202ENST00000381551 REREQ9P2R6 1566 aa23.38■■□□□ 1.33
PDGFB-202ENST00000381551 ADGBQ8N7X0 1667 aa23.38■■□□□ 1.33
PDGFB-202ENST00000381551 ARID4BQ4LE39 1312 aaPredicted RBP23.36■■□□□ 1.33
PDGFB-202ENST00000381551 TRIM26Q12899 539 aaPredicted RBP23.34■■□□□ 1.33
PDGFB-202ENST00000381551 DUOX2Q9NRD8 1548 aa23.33■■□□□ 1.33
PDGFB-202ENST00000381551 SIGLEC1Q9BZZ2 1709 aa23.33■■□□□ 1.33
PDGFB-202ENST00000381551 AGLP35573 1532 aa23.33■■□□□ 1.32
PDGFB-202ENST00000381551 KIF3BO15066 747 aa23.31■■□□□ 1.32
PDGFB-202ENST00000381551 ANKRD50Q9ULJ7 1429 aa23.28■■□□□ 1.32
PDGFB-202ENST00000381551 NAIPQ13075 1403 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 ERBINQ96RT1 1412 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 MLECQ14165 292 aa23.27■■□□□ 1.32
PDGFB-202ENST00000381551 HFM1A2PYH4 1435 aa23.25■■□□□ 1.31
PDGFB-202ENST00000381551 GGT6Q6P531 493 aa23.25■■□□□ 1.31
PDGFB-202ENST00000381551 BCORL1Q5H9F3 1711 aa23.22■■□□□ 1.31
PDGFB-202ENST00000381551 PPP6R1Q9UPN7 881 aa23.21■■□□□ 1.31
PDGFB-202ENST00000381551 EIF2AK4Q9P2K8 1649 aaKnown RBP23.21■■□□□ 1.31
PDGFB-202ENST00000381551 KDM4FA0A1W2PPD8 638 aa23.19■■□□□ 1.3
PDGFB-202ENST00000381551 SETD5Q9C0A6 1442 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms