RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 ARHGAP5Q13017 1502 aa29.1■■■□□ 2.25
SMN2-202ENST00000380742 MYOM3Q5VTT5 1437 aa29.09■■■□□ 2.25
SMN2-202ENST00000380742 TEX14Q8IWB6 1497 aa29.07■■■□□ 2.24
SMN2-202ENST00000380742 FANCAO15360 1455 aa29.06■■■□□ 2.24
SMN2-202ENST00000380742 CFAP74Q9C0B2 1584 aa29.06■■■□□ 2.24
SMN2-202ENST00000380742 CFDP1Q9UEE9 299 aaPredicted RBP29.04■■■□□ 2.24
SMN2-202ENST00000380742 EFCAB2Q5VUJ9 269 aa29.03■■■□□ 2.24
SMN2-202ENST00000380742 NEO1Q92859 1461 aa29.02■■■□□ 2.24
SMN2-202ENST00000380742 SAMD9LQ8IVG5 1584 aa29.02■■■□□ 2.24
SMN2-202ENST00000380742 MIA2Q96PC5 1412 aa29■■■□□ 2.23
SMN2-202ENST00000380742 AKNAQ7Z591 1439 aa28.99■■■□□ 2.23
SMN2-202ENST00000380742 FGD6Q6ZV73 1430 aa28.98■■■□□ 2.23
SMN2-202ENST00000380742 ZNF777Q9ULD5 760 aaPredicted RBP28.98■■■□□ 2.23
SMN2-202ENST00000380742 PTPN23Q9H3S7 1636 aa28.96■■■□□ 2.23
SMN2-202ENST00000380742 ZNF644Q9H582 1327 aaPredicted RBP28.95■■■□□ 2.23
SMN2-202ENST00000380742 ABCC1P33527 1531 aa28.94■■■□□ 2.22
SMN2-202ENST00000380742 CAMSAP2Q08AD1 1489 aa28.94■■■□□ 2.22
SMN2-202ENST00000380742 ADGRL1O94910 1474 aa28.93■■■□□ 2.22
SMN2-202ENST00000380742 ARHGEF12Q9NZN5 1544 aa28.9■■■□□ 2.22
SMN2-202ENST00000380742 TCOF1Q13428 1488 aaKnown RBP28.9■■■□□ 2.22
SMN2-202ENST00000380742 SYCP2Q9BX26 1530 aa28.89■■■□□ 2.21
SMN2-202ENST00000380742 SCAPERQ9BY12 1400 aa28.88■■■□□ 2.21
SMN2-202ENST00000380742 COL17A1Q9UMD9 1497 aaPredicted RBP28.88■■■□□ 2.21
SMN2-202ENST00000380742 PLEKHH2Q8IVE3 1493 aa28.87■■■□□ 2.21
SMN2-202ENST00000380742 RRBP1Q9P2E9 1410 aaKnown RBP28.86■■■□□ 2.21
SMN2-202ENST00000380742 KIAA1107Q9UPP5 1409 aa28.86■■■□□ 2.21
SMN2-202ENST00000380742 KDM6BO15054 1643 aa28.85■■■□□ 2.21
SMN2-202ENST00000380742 RICTORQ6R327 1708 aa28.85■■■□□ 2.21
SMN2-202ENST00000380742 HNRNPMP52272 730 aaKnown RBP eCLIP28.84■■■□□ 2.21
SMN2-202ENST00000380742 MBD5Q9P267 1494 aa28.83■■■□□ 2.21
SMN2-202ENST00000380742 DENND4BO75064 1496 aaPredicted RBP28.82■■■□□ 2.2
SMN2-202ENST00000380742 FRMPD1Q5SYB0 1578 aa28.82■■■□□ 2.2
SMN2-202ENST00000380742 TRAPPC8Q9Y2L5 1435 aa28.81■■■□□ 2.2
SMN2-202ENST00000380742 ARHGEF5Q12774 1597 aa28.8■■■□□ 2.2
SMN2-202ENST00000380742 FAM50AQ14320 339 aaKnown RBP28.8■■■□□ 2.2
SMN2-202ENST00000380742 POGZQ7Z3K3 1410 aa28.79■■■□□ 2.2
SMN2-202ENST00000380742 RAPGEF3O95398 923 aa28.78■■■□□ 2.2
SMN2-202ENST00000380742 DNMT1P26358 1616 aaKnown RBP28.77■■■□□ 2.2
SMN2-202ENST00000380742 AFAP1Q8N556 730 aa28.75■■■□□ 2.19
SMN2-202ENST00000380742 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.75■■■□□ 2.19
SMN2-202ENST00000380742 ZNF518AQ6AHZ1 1483 aa28.75■■■□□ 2.19
SMN2-202ENST00000380742 KDM5CP41229 1560 aa28.74■■■□□ 2.19
SMN2-202ENST00000380742 CCDC141Q6ZP82 1450 aa28.74■■■□□ 2.19
SMN2-202ENST00000380742 CROCC2H7BZ55 1655 aa28.73■■■□□ 2.19
SMN2-202ENST00000380742 RSPH4AQ5TD94 716 aa28.7■■■□□ 2.18
SMN2-202ENST00000380742 ABCC5O15440 1437 aa28.7■■■□□ 2.18
SMN2-202ENST00000380742 DAPK1P53355 1430 aa28.7■■■□□ 2.18
SMN2-202ENST00000380742 ZMYM4Q5VZL5 1548 aa28.69■■■□□ 2.18
SMN2-202ENST00000380742 HECW2Q9P2P5 1572 aa28.66■■■□□ 2.18
SMN2-202ENST00000380742 KIDINS220Q9ULH0 1771 aa28.65■■■□□ 2.18
SMN2-202ENST00000380742 INO80Q9ULG1 1556 aaPredicted RBP28.65■■■□□ 2.18
SMN2-202ENST00000380742 MAST1Q9Y2H9 1570 aa28.64■■■□□ 2.17
SMN2-202ENST00000380742 PTPRKQ15262 1439 aa28.62■■■□□ 2.17
SMN2-202ENST00000380742 MLH3Q9UHC1 1453 aa28.62■■■□□ 2.17
SMN2-202ENST00000380742 ZFYVE16Q7Z3T8 1539 aa28.62■■■□□ 2.17
SMN2-202ENST00000380742 SPAG9O60271 1321 aaKnown RBP28.62■■■□□ 2.17
SMN2-202ENST00000380742 SHANK2Q9UPX8 1470 aa28.62■■■□□ 2.17
SMN2-202ENST00000380742 ATP7AQ04656 1500 aa28.61■■■□□ 2.17
SMN2-202ENST00000380742 TSPY4P0CV99 314 aa28.61■■■□□ 2.17
SMN2-202ENST00000380742 TSPY10P0CW01 314 aa28.61■■■□□ 2.17
SMN2-202ENST00000380742 ITGAEP38570 1179 aa28.61■■■□□ 2.17
SMN2-202ENST00000380742 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
SMN2-202ENST00000380742 ADGBQ8N7X0 1667 aa28.59■■■□□ 2.17
SMN2-202ENST00000380742 MAGI2Q86UL8 1455 aa28.58■■■□□ 2.17
SMN2-202ENST00000380742 RTEL1-TNFRSF6BF6WH68 1400 aa28.57■■■□□ 2.16
SMN2-202ENST00000380742 ABCA6Q8N139 1617 aa28.57■■■□□ 2.16
SMN2-202ENST00000380742 YEATS2Q9ULM3 1422 aa28.57■■■□□ 2.16
SMN2-202ENST00000380742 CHIC2Q9UKJ5 165 aa28.55■■■□□ 2.16
SMN2-202ENST00000380742 MYT1LQ9UL68 1186 aa28.55■■■□□ 2.16
SMN2-202ENST00000380742 DIP2CQ9Y2E4 1556 aa28.54■■■□□ 2.16
SMN2-202ENST00000380742 ARHGEF40Q8TER5 1519 aa28.54■■■□□ 2.16
SMN2-202ENST00000380742 PLXNC1O60486 1568 aa28.52■■■□□ 2.16
SMN2-202ENST00000380742 ADGRL2O95490 1459 aa28.51■■■□□ 2.15
SMN2-202ENST00000380742 NCOA1Q15788 1441 aa28.47■■■□□ 2.15
SMN2-202ENST00000380742 TRIM26Q12899 539 aaPredicted RBP28.47■■■□□ 2.15
SMN2-202ENST00000380742 ANKRD30AQ9BXX3 1397 aa28.45■■■□□ 2.15
SMN2-202ENST00000380742 ATP10AO60312 1499 aa28.45■■■□□ 2.14
SMN2-202ENST00000380742 ROCK1Q13464 1354 aa28.44■■■□□ 2.14
SMN2-202ENST00000380742 SIGLEC1Q9BZZ2 1709 aa28.44■■■□□ 2.14
SMN2-202ENST00000380742 RRP7BPQ9NSQ0 103 aa28.43■■■□□ 2.14
SMN2-202ENST00000380742 REREQ9P2R6 1566 aa28.41■■■□□ 2.14
SMN2-202ENST00000380742 KIF15Q9NS87 1388 aa28.41■■■□□ 2.14
SMN2-202ENST00000380742 A2MP01023 1474 aa28.4■■■□□ 2.14
SMN2-202ENST00000380742 DUOX2Q9NRD8 1548 aa28.38■■■□□ 2.13
SMN2-202ENST00000380742 GCC2Q8IWJ2 1684 aa28.37■■■□□ 2.13
SMN2-202ENST00000380742 DHX29Q7Z478 1369 aaKnown RBP28.37■■■□□ 2.13
SMN2-202ENST00000380742 NAIPQ13075 1403 aa28.32■■■□□ 2.12
SMN2-202ENST00000380742 HFM1A2PYH4 1435 aa28.32■■■□□ 2.12
SMN2-202ENST00000380742 EIF2AK4Q9P2K8 1649 aaKnown RBP28.3■■■□□ 2.12
SMN2-202ENST00000380742 BCORL1Q5H9F3 1711 aa28.3■■■□□ 2.12
SMN2-202ENST00000380742 AGLP35573 1532 aa28.3■■■□□ 2.12
SMN2-202ENST00000380742 ERBINQ96RT1 1412 aa28.29■■■□□ 2.12
SMN2-202ENST00000380742 ANKRD50Q9ULJ7 1429 aa28.28■■■□□ 2.12
SMN2-202ENST00000380742 ARID4BQ4LE39 1312 aaPredicted RBP28.22■■■□□ 2.11
SMN2-202ENST00000380742 KIF3BO15066 747 aa28.22■■■□□ 2.11
SMN2-202ENST00000380742 RNF17Q9BXT8 1623 aaKnown RBP28.21■■■□□ 2.11
SMN2-202ENST00000380742 SETD5Q9C0A6 1442 aa28.21■■■□□ 2.11
SMN2-202ENST00000380742 DEPDC5O75140 1603 aa28.2■■■□□ 2.1
SMN2-202ENST00000380742 PCGF6Q9BYE7 350 aa28.19■■■□□ 2.1
SMN2-202ENST00000380742 MROH1Q8NDA8 1641 aa28.18■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms