RNA–Protein interactions for RNA: ENST00000380665.3

CDCA2-202, Transcript of cell division cycle associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCA2, Length 3,565 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA2-202ENST00000380665 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
CDCA2-202ENST00000380665 ST20-MTHFSA0A0A6YYL1 179 aa17.61■□□□□ 0.41
CDCA2-202ENST00000380665 HFM1A2PYH4 1435 aa17.58■□□□□ 0.4
CDCA2-202ENST00000380665 NBR1Q14596 966 aa17.58■□□□□ 0.4
CDCA2-202ENST00000380665 KIF7Q2M1P5 1343 aa17.57■□□□□ 0.4
CDCA2-202ENST00000380665 BCL11AQ9H165 835 aa17.57■□□□□ 0.4
CDCA2-202ENST00000380665 MYT1Q01538 1121 aa17.56■□□□□ 0.4
CDCA2-202ENST00000380665 TNNT2P45379 298 aaPredicted RBP17.52■□□□□ 0.39
CDCA2-202ENST00000380665 EPRSP07814 1512 aaKnown RBP17.51■□□□□ 0.39
CDCA2-202ENST00000380665 EFCAB5A4FU69 1503 aa17.5■□□□□ 0.39
CDCA2-202ENST00000380665 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
CDCA2-202ENST00000380665 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
CDCA2-202ENST00000380665 CCDC7Q96M83 1385 aa17.49■□□□□ 0.39
CDCA2-202ENST00000380665 GRIN2BQ13224 1484 aa17.48■□□□□ 0.39
CDCA2-202ENST00000380665 ANP32EQ9BTT0 268 aa17.48■□□□□ 0.39
CDCA2-202ENST00000380665 ANKRD30AQ9BXX3 1397 aa17.48■□□□□ 0.39
CDCA2-202ENST00000380665 USP47Q96K76 1375 aa17.47■□□□□ 0.39
CDCA2-202ENST00000380665 NBPF1Q3BBV0 1214 aa17.46■□□□□ 0.39
CDCA2-202ENST00000380665 CARMIL2Q6F5E8 1435 aa17.46■□□□□ 0.39
CDCA2-202ENST00000380665 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
CDCA2-202ENST00000380665 PPP4R2Q9NY27 417 aa17.45■□□□□ 0.38
CDCA2-202ENST00000380665 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
CDCA2-202ENST00000380665 NEUROD2Q15784 382 aa17.45■□□□□ 0.38
CDCA2-202ENST00000380665 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
CDCA2-202ENST00000380665 THOC2Q8NI27 1593 aaKnown RBP17.44■□□□□ 0.38
CDCA2-202ENST00000380665 PTPN23Q9H3S7 1636 aa17.42■□□□□ 0.38
CDCA2-202ENST00000380665 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
CDCA2-202ENST00000380665 PLIN1O60240 522 aa17.41■□□□□ 0.38
CDCA2-202ENST00000380665 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.385e-8■■■□□ 18.5
CDCA2-202ENST00000380665 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
CDCA2-202ENST00000380665 DAPK1P53355 1430 aa17.4■□□□□ 0.38
CDCA2-202ENST00000380665 MRC2Q9UBG0 1479 aa17.4■□□□□ 0.38
CDCA2-202ENST00000380665 PTPRGP23470 1445 aa17.39■□□□□ 0.38
CDCA2-202ENST00000380665 ABCC5O15440 1437 aa17.39■□□□□ 0.37
CDCA2-202ENST00000380665 MAGI3Q5TCQ9 1506 aa17.39■□□□□ 0.37
CDCA2-202ENST00000380665 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
CDCA2-202ENST00000380665 SUPT6HQ7KZ85 1726 aaKnown RBP17.38■□□□□ 0.37
CDCA2-202ENST00000380665 ANKRD50Q9ULJ7 1429 aa17.38■□□□□ 0.37
CDCA2-202ENST00000380665 IQGAP2Q13576 1575 aa17.37■□□□□ 0.37
CDCA2-202ENST00000380665 WDR43Q15061 677 aaKnown RBP eCLIP17.37■□□□□ 0.37
CDCA2-202ENST00000380665 KIF15Q9NS87 1388 aa17.36■□□□□ 0.37
CDCA2-202ENST00000380665 CUL7Q14999 1698 aa17.36■□□□□ 0.37
CDCA2-202ENST00000380665 CNTLNQ9NXG0 1405 aa17.36■□□□□ 0.37
CDCA2-202ENST00000380665 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
CDCA2-202ENST00000380665 GGT6Q6P531 493 aa17.35■□□□□ 0.37
CDCA2-202ENST00000380665 ANKRD30BQ9BXX2 1392 aa17.35■□□□□ 0.37
CDCA2-202ENST00000380665 PANK3Q9H999 370 aa17.34■□□□□ 0.37
CDCA2-202ENST00000380665 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
CDCA2-202ENST00000380665 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.34■□□□□ 0.37
CDCA2-202ENST00000380665 KIF3BO15066 747 aa17.33■□□□□ 0.37
CDCA2-202ENST00000380665 CCDC146Q8IYE0 955 aa17.33■□□□□ 0.37
CDCA2-202ENST00000380665 KNSTRNQ9Y448 316 aa17.33■□□□□ 0.37
CDCA2-202ENST00000380665 ANP32AP39687 249 aaKnown RBP17.33■□□□□ 0.36
CDCA2-202ENST00000380665 AKNAQ7Z591 1439 aa17.33■□□□□ 0.36
CDCA2-202ENST00000380665 CDCA7LQ96GN5 454 aa17.32■□□□□ 0.36
CDCA2-202ENST00000380665 KIF21AQ7Z4S6 1674 aa17.32■□□□□ 0.36
CDCA2-202ENST00000380665 ARHGEF11O15085 1522 aa17.32■□□□□ 0.36
CDCA2-202ENST00000380665 SKAP1Q86WV1 359 aa17.31■□□□□ 0.36
CDCA2-202ENST00000380665 DAXXQ9UER7 740 aaPredicted RBP17.31■□□□□ 0.36
CDCA2-202ENST00000380665 NPM1P06748 294 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDCA2-202ENST00000380665 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
CDCA2-202ENST00000380665 TROQ12816 1431 aaPredicted RBP17.29■□□□□ 0.36
CDCA2-202ENST00000380665 KDM6BO15054 1643 aa17.29■□□□□ 0.36
CDCA2-202ENST00000380665 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
CDCA2-202ENST00000380665 RTL5Q5HYW3 569 aaPredicted RBP17.28■□□□□ 0.36
CDCA2-202ENST00000380665 HECW1Q76N89 1606 aa17.28■□□□□ 0.36
CDCA2-202ENST00000380665 EXOC6Q8TAG9 804 aa17.28■□□□□ 0.36
CDCA2-202ENST00000380665 KIAA0586Q9BVV6 1533 aa17.27■□□□□ 0.36
CDCA2-202ENST00000380665 ZBED9Q6R2W3 1325 aa17.27■□□□□ 0.36
CDCA2-202ENST00000380665 UGGT2Q9NYU1 1516 aa17.27■□□□□ 0.36
CDCA2-202ENST00000380665 MIA2Q96PC5 1412 aa17.27■□□□□ 0.36
CDCA2-202ENST00000380665 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.35
CDCA2-202ENST00000380665 TMF1P82094 1093 aa17.27■□□□□ 0.35
CDCA2-202ENST00000380665 IFT140Q96RY7 1462 aa17.26■□□□□ 0.35
CDCA2-202ENST00000380665 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
CDCA2-202ENST00000380665 NUP153P49790 1475 aaKnown RBP17.26■□□□□ 0.35
CDCA2-202ENST00000380665 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
CDCA2-202ENST00000380665 RGS3P49796 1198 aa17.25■□□□□ 0.35
CDCA2-202ENST00000380665 EFCAB2Q5VUJ9 269 aa17.25■□□□□ 0.35
CDCA2-202ENST00000380665 CCDC144AA2RUR9 1427 aa17.25■□□□□ 0.35
CDCA2-202ENST00000380665 RCAN3Q9UKA8 241 aa17.24■□□□□ 0.35
CDCA2-202ENST00000380665 NCOA1Q15788 1441 aa17.23■□□□□ 0.35
CDCA2-202ENST00000380665 C9orf84Q5VXU9 1444 aa17.23■□□□□ 0.35
CDCA2-202ENST00000380665 STK26Q9P289 416 aa17.23■□□□□ 0.35
CDCA2-202ENST00000380665 CAMSAP2Q08AD1 1489 aa17.23■□□□□ 0.35
CDCA2-202ENST00000380665 SPAG9O60271 1321 aaKnown RBP17.22■□□□□ 0.35
CDCA2-202ENST00000380665 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
CDCA2-202ENST00000380665 KTN1Q86UP2 1357 aaKnown RBP17.22■□□□□ 0.35
CDCA2-202ENST00000380665 KIAA1107Q9UPP5 1409 aa17.22■□□□□ 0.35
CDCA2-202ENST00000380665 MSH5O43196 834 aa17.2■□□□□ 0.34
CDCA2-202ENST00000380665 TRAK1Q9UPV9 953 aa17.2■□□□□ 0.34
CDCA2-202ENST00000380665 STAG3Q9UJ98 1225 aa17.2■□□□□ 0.34
CDCA2-202ENST00000380665 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
CDCA2-202ENST00000380665 FRAT1Q92837 279 aaPredicted RBP17.19■□□□□ 0.34
CDCA2-202ENST00000380665 RRP7AQ9Y3A4 280 aaKnown RBP17.19■□□□□ 0.34
CDCA2-202ENST00000380665 NLRP13Q86W25 1043 aa17.19■□□□□ 0.34
CDCA2-202ENST00000380665 PNISRQ8TF01 805 aaKnown RBP17.19■□□□□ 0.34
CDCA2-202ENST00000380665 MLECQ14165 292 aa17.18■□□□□ 0.34
CDCA2-202ENST00000380665 GPATCH8Q9UKJ3 1502 aaKnown RBP17.18■□□□□ 0.34
CDCA2-202ENST00000380665 MYBBP1AQ9BQG0 1328 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms