RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 HAP1P54257 671 aaPredicted RBP28.09■■■□□ 2.09
SKI-201ENST00000378536 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
SKI-201ENST00000378536 CASKIN1Q8WXD9 1431 aa28.07■■■□□ 2.08
SKI-201ENST00000378536 CC2D1BQ5T0F9 858 aaKnown RBP28.07■■■□□ 2.08
SKI-201ENST00000378536 CCDC136Q96JN2 1154 aa28.07■■■□□ 2.08
SKI-201ENST00000378536 PEG3Q9GZU2 1588 aa28.07■■■□□ 2.08
SKI-201ENST00000378536 ROCK2O75116 1388 aaKnown RBP28.06■■■□□ 2.08
SKI-201ENST00000378536 SRPK2P78362 688 aaKnown RBP28.05■■■□□ 2.08
SKI-201ENST00000378536 PRXQ9BXM0 1461 aa28.04■■■□□ 2.08
SKI-201ENST00000378536 NUDCQ9Y266 331 aa28.03■■■□□ 2.08
SKI-201ENST00000378536 ANP32AP39687 249 aaKnown RBP28.02■■■□□ 2.08
SKI-201ENST00000378536 SAFB2Q14151 953 aaKnown RBP eCLIP28.02■■■□□ 2.08
SKI-201ENST00000378536 DNAJC5BQ9UF47 199 aa28.02■■■□□ 2.08
SKI-201ENST00000378536 SNAPC4Q5SXM2 1469 aa28.02■■■□□ 2.08
SKI-201ENST00000378536 STK26Q9P289 416 aa28.01■■■□□ 2.07
SKI-201ENST00000378536 TNNT2P45379 298 aaPredicted RBP28■■■□□ 2.07
SKI-201ENST00000378536 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
SKI-201ENST00000378536 LMOD2Q6P5Q4 547 aa28■■■□□ 2.07
SKI-201ENST00000378536 MYOM3Q5VTT5 1437 aa27.99■■■□□ 2.07
SKI-201ENST00000378536 LRRC9Q6ZRR7 1453 aa27.99■■■□□ 2.07
SKI-201ENST00000378536 L3MBTL2Q969R5 705 aa27.98■■■□□ 2.07
SKI-201ENST00000378536 A0A0G2JS52 829 aa27.97■■■□□ 2.07
SKI-201ENST00000378536 FGD6Q6ZV73 1430 aa27.97■■■□□ 2.07
SKI-201ENST00000378536 EFCAB5A4FU69 1503 aa27.96■■■□□ 2.07
SKI-201ENST00000378536 MAPK8IP3Q9UPT6 1336 aa27.96■■■□□ 2.07
SKI-201ENST00000378536 NPM2Q86SE8 214 aaKnown RBP27.95■■■□□ 2.06
SKI-201ENST00000378536 ARAP1Q96P48 1450 aa27.95■■■□□ 2.06
SKI-201ENST00000378536 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.06
SKI-201ENST00000378536 SENP3-EIF4A1A0A087X0R7 540 aa27.93■■■□□ 2.06
SKI-201ENST00000378536 IRX6P78412 446 aaPredicted RBP27.93■■■□□ 2.06
SKI-201ENST00000378536 ABCA10Q8WWZ4 1543 aa27.92■■■□□ 2.06
SKI-201ENST00000378536 DHX57Q6P158 1386 aaKnown RBP27.91■■■□□ 2.06
SKI-201ENST00000378536 EIF3AQ14152 1382 aaKnown RBP27.9■■■□□ 2.06
SKI-201ENST00000378536 SYNJ2O15056 1496 aa27.9■■■□□ 2.06
SKI-201ENST00000378536 UPF2Q9HAU5 1272 aaKnown RBP27.89■■■□□ 2.06
SKI-201ENST00000378536 PHLDB1Q86UU1 1377 aa27.89■■■□□ 2.06
SKI-201ENST00000378536 CCDC144AA2RUR9 1427 aa27.89■■■□□ 2.05
SKI-201ENST00000378536 NEUROD2Q15784 382 aa27.88■■■□□ 2.05
SKI-201ENST00000378536 NCOA2Q15596 1464 aa27.88■■■□□ 2.05
SKI-201ENST00000378536 FAM69CQ0P6D2 419 aa27.87■■■□□ 2.05
SKI-201ENST00000378536 MYH16Q9H6N6 1097 aa27.86■■■□□ 2.05
SKI-201ENST00000378536 ZNF644Q9H582 1327 aaPredicted RBP27.86■■■□□ 2.05
SKI-201ENST00000378536 MORC1Q86VD1 984 aa27.86■■■□□ 2.05
SKI-201ENST00000378536 U2SURPO15042 1029 aaKnown RBP27.84■■■□□ 2.05
SKI-201ENST00000378536 HDGFL2Q7Z4V5 671 aaPredicted RBP27.84■■■□□ 2.05
SKI-201ENST00000378536 EID1Q9Y6B2 187 aa27.82■■■□□ 2.04
SKI-201ENST00000378536 PNNQ9H307 717 aaKnown RBP27.82■■■□□ 2.04
SKI-201ENST00000378536 KTN1Q86UP2 1357 aaKnown RBP27.8■■■□□ 2.04
SKI-201ENST00000378536 NUTM2DQ5VT03 806 aaPredicted RBP27.8■■■□□ 2.04
SKI-201ENST00000378536 CCER2I3L3R5 266 aa27.79■■■□□ 2.04
SKI-201ENST00000378536 UACAQ9BZF9 1416 aa27.77■■■□□ 2.04
SKI-201ENST00000378536 LAS1LQ9Y4W2 734 aaKnown RBP27.77■■■□□ 2.04
SKI-201ENST00000378536 KIF15Q9NS87 1388 aa27.76■■■□□ 2.03
SKI-201ENST00000378536 ARHGAP5Q13017 1502 aa27.74■■■□□ 2.03
SKI-201ENST00000378536 KIAA0586Q9BVV6 1533 aa27.74■■■□□ 2.03
SKI-201ENST00000378536 SOX12O15370 315 aa27.72■■■□□ 2.03
SKI-201ENST00000378536 HECW1Q76N89 1606 aa27.7■■■□□ 2.02
SKI-201ENST00000378536 CUL7Q14999 1698 aa27.7■■■□□ 2.02
SKI-201ENST00000378536 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
SKI-201ENST00000378536 EHBP1L1Q8N3D4 1523 aa27.69■■■□□ 2.02
SKI-201ENST00000378536 SUPT16HQ9Y5B9 1047 aaKnown RBP27.69■■■□□ 2.02
SKI-201ENST00000378536 HSP90AA1P07900 732 aaKnown RBP27.69■■■□□ 2.02
SKI-201ENST00000378536 RALBP1Q15311 655 aa27.67■■■□□ 2.02
SKI-201ENST00000378536 FTSJ3Q8IY81 847 aaKnown RBP27.66■■■□□ 2.02
SKI-201ENST00000378536 ANKRD50Q9ULJ7 1429 aa27.65■■■□□ 2.02
SKI-201ENST00000378536 VGFO15240 615 aaPredicted RBP27.64■■■□□ 2.02
SKI-201ENST00000378536 IQGAP2Q13576 1575 aa27.64■■■□□ 2.02
SKI-201ENST00000378536 TRAK1Q9UPV9 953 aa27.62■■■□□ 2.01
SKI-201ENST00000378536 TROQ12816 1431 aaPredicted RBP27.62■■■□□ 2.01
SKI-201ENST00000378536 TERF2IPQ9NYB0 399 aa27.61■■■□□ 2.01
SKI-201ENST00000378536 MAGI1Q96QZ7 1491 aaPredicted RBP27.6■■■□□ 2.01
SKI-201ENST00000378536 PAK3O75914 559 aaPredicted RBP27.6■■■□□ 2.01
SKI-201ENST00000378536 RRBP1Q9P2E9 1410 aaKnown RBP27.6■■■□□ 2.01
SKI-201ENST00000378536 BIVM-ERCC5R4GMW8 1640 aa27.58■■■□□ 2.01
SKI-201ENST00000378536 TIAM1Q13009 1591 aa27.58■■■□□ 2.01
SKI-201ENST00000378536 AFAP1Q8N556 730 aa27.58■■■□□ 2.01
SKI-201ENST00000378536 ST20-MTHFSA0A0A6YYL1 179 aa27.56■■■□□ 2
SKI-201ENST00000378536 GRIN2AQ12879 1464 aa27.55■■■□□ 2
SKI-201ENST00000378536 MIA2Q96PC5 1412 aa27.55■■■□□ 2
SKI-201ENST00000378536 FRAT1Q92837 279 aaPredicted RBP27.55■■■□□ 2
SKI-201ENST00000378536 ARXQ96QS3 562 aa27.55■■■□□ 2
SKI-201ENST00000378536 PLEKHH2Q8IVE3 1493 aa27.52■■■□□ 2
SKI-201ENST00000378536 MS4A1P11836 297 aa27.49■■□□□ 1.99
SKI-201ENST00000378536 U2AF1L5P0DN76 240 aaPredicted RBP27.48■■□□□ 1.99
SKI-201ENST00000378536 U2AF1Q01081 240 aaKnown RBP eCLIP27.48■■□□□ 1.99
SKI-201ENST00000378536 EPRSP07814 1512 aaKnown RBP27.48■■□□□ 1.99
SKI-201ENST00000378536 USP47Q96K76 1375 aa27.48■■□□□ 1.99
SKI-201ENST00000378536 NGDNQ8NEJ9 315 aaKnown RBP27.46■■□□□ 1.99
SKI-201ENST00000378536 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
SKI-201ENST00000378536 CHMP4BQ9H444 224 aaKnown RBP27.46■■□□□ 1.99
SKI-201ENST00000378536 RTF1Q92541 710 aaKnown RBP27.45■■□□□ 1.99
SKI-201ENST00000378536 SUPT6HQ7KZ85 1726 aaKnown RBP27.45■■□□□ 1.98
SKI-201ENST00000378536 CDK13Q14004 1512 aaKnown RBP27.45■■□□□ 1.98
SKI-201ENST00000378536 C9orf84Q5VXU9 1444 aa27.45■■□□□ 1.98
SKI-201ENST00000378536 STAC3Q96MF2 364 aa27.42■■□□□ 1.98
SKI-201ENST00000378536 EVC2Q86UK5 1308 aa27.41■■□□□ 1.98
SKI-201ENST00000378536 PPP4R2Q9NY27 417 aa27.41■■□□□ 1.98
SKI-201ENST00000378536 NLRP13Q86W25 1043 aa27.4■■□□□ 1.98
SKI-201ENST00000378536 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.98
SKI-201ENST00000378536 NUTM2FA1L443 756 aa27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms