RNA–Protein interactions for RNA: ENST00000377400.8

CBWD1-203, Transcript of COBW domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBWD1, Length 1,792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-203ENST00000377400 CDC42BPAQ5VT25 1732 aa34.81■■■■□ 3.16
CBWD1-203ENST00000377400 PREX2Q70Z35 1606 aa34.8■■■■□ 3.16
CBWD1-203ENST00000377400 ITSN2Q9NZM3 1697 aa34.77■■■■□ 3.16
CBWD1-203ENST00000377400 CDC42BPBQ9Y5S2 1711 aa34.75■■■■□ 3.15
CBWD1-203ENST00000377400 ARAP3Q8WWN8 1544 aa34.75■■■■□ 3.15
CBWD1-203ENST00000377400 CFAP74Q9C0B2 1584 aa34.74■■■■□ 3.15
CBWD1-203ENST00000377400 PHLDB1Q86UU1 1377 aa34.74■■■■□ 3.15
CBWD1-203ENST00000377400 NEO1Q92859 1461 aa34.73■■■■□ 3.15
CBWD1-203ENST00000377400 MYOM3Q5VTT5 1437 aa34.72■■■■□ 3.15
CBWD1-203ENST00000377400 AKNAQ7Z591 1439 aa34.71■■■■□ 3.15
CBWD1-203ENST00000377400 ADGRL1O94910 1474 aa34.65■■■■□ 3.14
CBWD1-203ENST00000377400 ZNF644Q9H582 1327 aaPredicted RBP34.61■■■■□ 3.13
CBWD1-203ENST00000377400 MIA2Q96PC5 1412 aa34.6■■■■□ 3.13
CBWD1-203ENST00000377400 KDM6BO15054 1643 aa34.6■■■■□ 3.13
CBWD1-203ENST00000377400 SCAPERQ9BY12 1400 aa34.6■■■■□ 3.13
CBWD1-203ENST00000377400 SAMD9LQ8IVG5 1584 aa34.59■■■■□ 3.13
CBWD1-203ENST00000377400 FGD6Q6ZV73 1430 aa34.58■■■■□ 3.13
CBWD1-203ENST00000377400 CAMSAP2Q08AD1 1489 aa34.55■■■■□ 3.12
CBWD1-203ENST00000377400 PLEKHH2Q8IVE3 1493 aa34.55■■■■□ 3.12
CBWD1-203ENST00000377400 DENND4BO75064 1496 aaPredicted RBP34.54■■■■□ 3.12
CBWD1-203ENST00000377400 ABCC1P33527 1531 aa34.54■■■■□ 3.12
CBWD1-203ENST00000377400 RAPGEF3O95398 923 aa34.54■■■■□ 3.12
CBWD1-203ENST00000377400 HNRNPMP52272 730 aaKnown RBP eCLIP34.54■■■■□ 3.12
CBWD1-203ENST00000377400 FAM50AQ14320 339 aaKnown RBP34.53■■■■□ 3.12
CBWD1-203ENST00000377400 SYCP2Q9BX26 1530 aa34.52■■■■□ 3.12
CBWD1-203ENST00000377400 COL17A1Q9UMD9 1497 aaPredicted RBP34.51■■■■□ 3.12
CBWD1-203ENST00000377400 PTPN23Q9H3S7 1636 aa34.51■■■■□ 3.11
CBWD1-203ENST00000377400 KIAA1107Q9UPP5 1409 aa34.47■■■■□ 3.11
CBWD1-203ENST00000377400 ARHGEF12Q9NZN5 1544 aa34.47■■■■□ 3.11
CBWD1-203ENST00000377400 MYT1LQ9UL68 1186 aa34.46■■■■□ 3.11
CBWD1-203ENST00000377400 AFAP1Q8N556 730 aa34.45■■■■□ 3.11
CBWD1-203ENST00000377400 POGZQ7Z3K3 1410 aa34.45■■■■□ 3.11
CBWD1-203ENST00000377400 ZNF518AQ6AHZ1 1483 aa34.43■■■■□ 3.1
CBWD1-203ENST00000377400 TRAPPC8Q9Y2L5 1435 aa34.43■■■■□ 3.1
CBWD1-203ENST00000377400 TCOF1Q13428 1488 aaKnown RBP34.4■■■■□ 3.1
CBWD1-203ENST00000377400 RICTORQ6R327 1708 aa34.38■■■■□ 3.09
CBWD1-203ENST00000377400 MBD5Q9P267 1494 aa34.37■■■■□ 3.09
CBWD1-203ENST00000377400 RSPH4AQ5TD94 716 aa34.37■■■■□ 3.09
CBWD1-203ENST00000377400 FRMPD1Q5SYB0 1578 aa34.36■■■■□ 3.09
CBWD1-203ENST00000377400 CCDC141Q6ZP82 1450 aa34.35■■■■□ 3.09
CBWD1-203ENST00000377400 TSPY4P0CV99 314 aa34.34■■■■□ 3.09
CBWD1-203ENST00000377400 TSPY10P0CW01 314 aa34.34■■■■□ 3.09
CBWD1-203ENST00000377400 RRBP1Q9P2E9 1410 aaKnown RBP34.33■■■■□ 3.09
CBWD1-203ENST00000377400 SPAG9O60271 1321 aaKnown RBP34.33■■■■□ 3.09
CBWD1-203ENST00000377400 ARHGEF5Q12774 1597 aa34.31■■■■□ 3.08
CBWD1-203ENST00000377400 ITGAEP38570 1179 aa34.31■■■■□ 3.08
CBWD1-203ENST00000377400 KDM5CP41229 1560 aa34.28■■■■□ 3.08
CBWD1-203ENST00000377400 DAPK1P53355 1430 aa34.26■■■■□ 3.07
CBWD1-203ENST00000377400 ZMYM4Q5VZL5 1548 aa34.26■■■■□ 3.07
CBWD1-203ENST00000377400 HECW2Q9P2P5 1572 aa34.24■■■■□ 3.07
CBWD1-203ENST00000377400 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.24■■■■□ 3.07
CBWD1-203ENST00000377400 DNMT1P26358 1616 aaKnown RBP34.24■■■■□ 3.07
CBWD1-203ENST00000377400 ABCC5O15440 1437 aa34.24■■■■□ 3.07
CBWD1-203ENST00000377400 MAGI2Q86UL8 1455 aa34.22■■■■□ 3.07
CBWD1-203ENST00000377400 ZFYVE16Q7Z3T8 1539 aa34.21■■■■□ 3.07
CBWD1-203ENST00000377400 MLH3Q9UHC1 1453 aa34.21■■■■□ 3.07
CBWD1-203ENST00000377400 CHIC2Q9UKJ5 165 aa34.21■■■■□ 3.07
CBWD1-203ENST00000377400 C9orf84Q5VXU9 1444 aa34.2■■■■□ 3.07
CBWD1-203ENST00000377400 ATP7AQ04656 1500 aa34.18■■■■□ 3.06
CBWD1-203ENST00000377400 YEATS2Q9ULM3 1422 aa34.18■■■■□ 3.06
CBWD1-203ENST00000377400 CROCC2H7BZ55 1655 aa34.16■■■■□ 3.06
CBWD1-203ENST00000377400 RTEL1-TNFRSF6BF6WH68 1400 aa34.15■■■■□ 3.06
CBWD1-203ENST00000377400 INO80Q9ULG1 1556 aaPredicted RBP34.15■■■■□ 3.06
CBWD1-203ENST00000377400 SHANK2Q9UPX8 1470 aa34.14■■■■□ 3.06
CBWD1-203ENST00000377400 KIDINS220Q9ULH0 1771 aa34.13■■■■□ 3.05
CBWD1-203ENST00000377400 ARHGEF40Q8TER5 1519 aa34.12■■■■□ 3.05
CBWD1-203ENST00000377400 MAST1Q9Y2H9 1570 aa34.1■■■■□ 3.05
CBWD1-203ENST00000377400 ABCA6Q8N139 1617 aa34.08■■■■□ 3.05
CBWD1-203ENST00000377400 DIP2CQ9Y2E4 1556 aa34.06■■■■□ 3.04
CBWD1-203ENST00000377400 ATP10AO60312 1499 aa34.06■■■■□ 3.04
CBWD1-203ENST00000377400 PTPRKQ15262 1439 aa34.06■■■■□ 3.04
CBWD1-203ENST00000377400 ANKRD30AQ9BXX3 1397 aa34.06■■■■□ 3.04
CBWD1-203ENST00000377400 RRP7BPQ9NSQ0 103 aa34.06■■■■□ 3.04
CBWD1-203ENST00000377400 ARID4BQ4LE39 1312 aaPredicted RBP34.04■■■■□ 3.04
CBWD1-203ENST00000377400 KIF15Q9NS87 1388 aa34■■■■□ 3.03
CBWD1-203ENST00000377400 ADGBQ8N7X0 1667 aa34■■■■□ 3.03
CBWD1-203ENST00000377400 A2MP01023 1474 aa33.98■■■■□ 3.03
CBWD1-203ENST00000377400 PLXNC1O60486 1568 aa33.98■■■■□ 3.03
CBWD1-203ENST00000377400 NCOA1Q15788 1441 aa33.97■■■■□ 3.03
CBWD1-203ENST00000377400 ADGRL2O95490 1459 aa33.96■■■■□ 3.03
CBWD1-203ENST00000377400 ROCK1Q13464 1354 aa33.94■■■■□ 3.02
CBWD1-203ENST00000377400 DHX29Q7Z478 1369 aaKnown RBP33.93■■■■□ 3.02
CBWD1-203ENST00000377400 TRIM26Q12899 539 aaPredicted RBP33.91■■■■□ 3.02
CBWD1-203ENST00000377400 DUOX2Q9NRD8 1548 aa33.91■■■■□ 3.02
CBWD1-203ENST00000377400 REREQ9P2R6 1566 aa33.89■■■■□ 3.02
CBWD1-203ENST00000377400 MLECQ14165 292 aa33.88■■■■□ 3.01
CBWD1-203ENST00000377400 KIF3BO15066 747 aa33.85■■■■□ 3.01
CBWD1-203ENST00000377400 SIGLEC1Q9BZZ2 1709 aa33.83■■■■□ 3.01
CBWD1-203ENST00000377400 ERBINQ96RT1 1412 aa33.82■■■■□ 3
CBWD1-203ENST00000377400 ANKRD50Q9ULJ7 1429 aa33.82■■■■□ 3
CBWD1-203ENST00000377400 GGT6Q6P531 493 aa33.8■■■■□ 3
CBWD1-203ENST00000377400 AGLP35573 1532 aa33.8■■■■□ 3
CBWD1-203ENST00000377400 HFM1A2PYH4 1435 aa33.76■■■■□ 3
CBWD1-203ENST00000377400 NAIPQ13075 1403 aa33.75■■■□□ 2.99
CBWD1-203ENST00000377400 EIF2AK4Q9P2K8 1649 aaKnown RBP33.73■■■□□ 2.99
CBWD1-203ENST00000377400 ESF1Q9H501 851 aaKnown RBP33.72■■■□□ 2.99
CBWD1-203ENST00000377400 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.71■■■□□ 2.99
CBWD1-203ENST00000377400 GCC2Q8IWJ2 1684 aa33.71■■■□□ 2.99
CBWD1-203ENST00000377400 BCORL1Q5H9F3 1711 aa33.68■■■□□ 2.98
CBWD1-203ENST00000377400 SETD5Q9C0A6 1442 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms