RNA–Protein interactions for RNA: ENST00000374270.7

SUSD1-204, Transcript of sushi domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SUSD1, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD1-204ENST00000374270 EIF4G2P78344 907 aaKnown RBP eCLIP27.95■■■□□ 2.07
SUSD1-204ENST00000374270 NUP153P49790 1475 aaKnown RBP27.94■■■□□ 2.06
SUSD1-204ENST00000374270 WDR62O43379 1518 aa27.93■■■□□ 2.06
SUSD1-204ENST00000374270 KDM2AQ9Y2K7 1162 aa27.93■■■□□ 2.06
SUSD1-204ENST00000374270 HNRNPMP52272 730 aaKnown RBP eCLIP27.92■■■□□ 2.06
SUSD1-204ENST00000374270 EIF4G3O43432 1585 aaKnown RBP27.92■■■□□ 2.06
SUSD1-204ENST00000374270 NBPF8Q3BBV2 869 aa27.91■■■□□ 2.06
SUSD1-204ENST00000374270 HNRNPUQ00839 825 aaKnown RBP eCLIP27.9■■■□□ 2.06
SUSD1-204ENST00000374270 ABCC5O15440 1437 aa27.88■■■□□ 2.05
SUSD1-204ENST00000374270 WASHC2AQ641Q2 1341 aa27.88■■■□□ 2.05
SUSD1-204ENST00000374270 C11orf95C9JLR9 678 aaPredicted RBP27.88■■■□□ 2.05
SUSD1-204ENST00000374270 DAPK1P53355 1430 aa27.88■■■□□ 2.05
SUSD1-204ENST00000374270 IRX6P78412 446 aaPredicted RBP27.87■■■□□ 2.05
SUSD1-204ENST00000374270 MYT1Q01538 1121 aa27.87■■■□□ 2.05
SUSD1-204ENST00000374270 PKD2Q13563 968 aa27.87■■■□□ 2.05
SUSD1-204ENST00000374270 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.85■■■□□ 2.053e-6■■□□□ 12.8
SUSD1-204ENST00000374270 FAM9BQ8IZU0 186 aa27.85■■■□□ 2.05
SUSD1-204ENST00000374270 KIAA0556O60303 1618 aa27.84■■■□□ 2.05
SUSD1-204ENST00000374270 CARMIL2Q6F5E8 1435 aa27.82■■■□□ 2.04
SUSD1-204ENST00000374270 MIA2Q96PC5 1412 aa27.82■■■□□ 2.04
SUSD1-204ENST00000374270 TSPY4P0CV99 314 aa27.81■■■□□ 2.04
SUSD1-204ENST00000374270 TSPY10P0CW01 314 aa27.81■■■□□ 2.04
SUSD1-204ENST00000374270 CCDC184Q52MB2 194 aa27.81■■■□□ 2.04
SUSD1-204ENST00000374270 ARHGEF11O15085 1522 aa27.8■■■□□ 2.04
SUSD1-204ENST00000374270 DENND4BO75064 1496 aaPredicted RBP27.79■■■□□ 2.04
SUSD1-204ENST00000374270 NEFLP07196 543 aa27.79■■■□□ 2.04
SUSD1-204ENST00000374270 TCOF1Q13428 1488 aaKnown RBP27.77■■■□□ 2.04
SUSD1-204ENST00000374270 SYNJ2O15056 1496 aa27.77■■■□□ 2.04
SUSD1-204ENST00000374270 TROQ12816 1431 aaPredicted RBP27.76■■■□□ 2.03
SUSD1-204ENST00000374270 CEP170Q5SW79 1584 aa27.75■■■□□ 2.03
SUSD1-204ENST00000374270 RAPGEF6Q8TEU7 1601 aa27.73■■■□□ 2.03
SUSD1-204ENST00000374270 RGL3Q3MIN7 710 aa27.73■■■□□ 2.03
SUSD1-204ENST00000374270 CCER2I3L3R5 266 aa27.71■■■□□ 2.03
SUSD1-204ENST00000374270 NUP155O75694 1391 aa27.7■■■□□ 2.03
SUSD1-204ENST00000374270 MAGI1Q96QZ7 1491 aaPredicted RBP27.69■■■□□ 2.02
SUSD1-204ENST00000374270 ANKRD30BQ9BXX2 1392 aa27.69■■■□□ 2.02
SUSD1-204ENST00000374270 CAMSAP2Q08AD1 1489 aa27.68■■■□□ 2.02
SUSD1-204ENST00000374270 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
SUSD1-204ENST00000374270 GPATCH8Q9UKJ3 1502 aaKnown RBP27.67■■■□□ 2.02
SUSD1-204ENST00000374270 PTPRGP23470 1445 aa27.67■■■□□ 2.02
SUSD1-204ENST00000374270 KIF14Q15058 1648 aa27.65■■■□□ 2.02
SUSD1-204ENST00000374270 ANKRD30AQ9BXX3 1397 aa27.63■■■□□ 2.01
SUSD1-204ENST00000374270 MYT1LQ9UL68 1186 aa27.62■■■□□ 2.01
SUSD1-204ENST00000374270 DCAF11Q8TEB1 546 aa27.62■■■□□ 2.01
SUSD1-204ENST00000374270 NCOA1Q15788 1441 aa27.61■■■□□ 2.01
SUSD1-204ENST00000374270 AKNAQ7Z591 1439 aa27.61■■■□□ 2.01
SUSD1-204ENST00000374270 KDM5BQ9UGL1 1544 aa27.6■■■□□ 2.01
SUSD1-204ENST00000374270 ATP10BO94823 1461 aa27.58■■■□□ 2
SUSD1-204ENST00000374270 KIF7Q2M1P5 1343 aa27.57■■■□□ 2
SUSD1-204ENST00000374270 ROCK1Q13464 1354 aa27.57■■■□□ 2
SUSD1-204ENST00000374270 ANKRD50Q9ULJ7 1429 aa27.57■■■□□ 2
SUSD1-204ENST00000374270 CARD11Q9BXL7 1154 aa27.55■■■□□ 2
SUSD1-204ENST00000374270 CCDC7Q96M83 1385 aa27.53■■■□□ 2
SUSD1-204ENST00000374270 NUP160Q12769 1436 aa27.52■■■□□ 2
SUSD1-204ENST00000374270 PRKRIP1Q9H875 184 aaPredicted RBP27.52■■■□□ 2
SUSD1-204ENST00000374270 GCC2Q8IWJ2 1684 aa27.51■■□□□ 1.99
SUSD1-204ENST00000374270 RPRD2Q5VT52 1461 aaKnown RBP27.49■■□□□ 1.99
SUSD1-204ENST00000374270 DNMT1P26358 1616 aaKnown RBP27.49■■□□□ 1.99
SUSD1-204ENST00000374270 KIF15Q9NS87 1388 aa27.49■■□□□ 1.99
SUSD1-204ENST00000374270 TSHZ2Q9NRE2 1034 aa27.48■■□□□ 1.99
SUSD1-204ENST00000374270 C9orf84Q5VXU9 1444 aa27.48■■□□□ 1.99
SUSD1-204ENST00000374270 SALL2Q9Y467 1007 aaPredicted RBP27.47■■□□□ 1.99
SUSD1-204ENST00000374270 PZPP20742 1482 aa27.46■■□□□ 1.99
SUSD1-204ENST00000374270 ST20-MTHFSA0A0A6YYL1 179 aa27.43■■□□□ 1.98
SUSD1-204ENST00000374270 USP47Q96K76 1375 aa27.42■■□□□ 1.98
SUSD1-204ENST00000374270 KIAA1107Q9UPP5 1409 aa27.42■■□□□ 1.98
SUSD1-204ENST00000374270 CNTLNQ9NXG0 1405 aa27.41■■□□□ 1.98
SUSD1-204ENST00000374270 TEX14Q8IWB6 1497 aa27.37■■□□□ 1.97
SUSD1-204ENST00000374270 NBPF1Q3BBV0 1214 aa27.33■■□□□ 1.97
SUSD1-204ENST00000374270 AFAP1Q8N556 730 aa27.29■■□□□ 1.96
SUSD1-204ENST00000374270 TMC1Q8TDI8 760 aa27.28■■□□□ 1.96
SUSD1-204ENST00000374270 ERCC6L2Q5T890 1561 aa27.28■■□□□ 1.96
SUSD1-204ENST00000374270 SENP3Q9H4L4 574 aaPredicted RBP27.27■■□□□ 1.96
SUSD1-204ENST00000374270 ABCC10Q5T3U5 1492 aa27.26■■□□□ 1.95
SUSD1-204ENST00000374270 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
SUSD1-204ENST00000374270 ABCA8O94911 1581 aa27.26■■□□□ 1.95
SUSD1-204ENST00000374270 ROCK2O75116 1388 aaKnown RBP27.25■■□□□ 1.95
SUSD1-204ENST00000374270 ITSN2Q9NZM3 1697 aa27.23■■□□□ 1.95
SUSD1-204ENST00000374270 B4GALNT3Q6L9W6 998 aa27.2■■□□□ 1.95
SUSD1-204ENST00000374270 CC2D1BQ5T0F9 858 aaKnown RBP27.19■■□□□ 1.94
SUSD1-204ENST00000374270 SPATA31E1Q6ZUB1 1445 aa27.19■■□□□ 1.94
SUSD1-204ENST00000374270 CDC42BPAQ5VT25 1732 aa27.18■■□□□ 1.94
SUSD1-204ENST00000374270 EFCAB2Q5VUJ9 269 aa27.16■■□□□ 1.94
SUSD1-204ENST00000374270 CCDC144AA2RUR9 1427 aa27.16■■□□□ 1.94
SUSD1-204ENST00000374270 ADGRL2O95490 1459 aa27.16■■□□□ 1.94
SUSD1-204ENST00000374270 SYCP2Q9BX26 1530 aa27.16■■□□□ 1.94
SUSD1-204ENST00000374270 MBD5Q9P267 1494 aa27.14■■□□□ 1.94
SUSD1-204ENST00000374270 CCDC141Q6ZP82 1450 aa27.14■■□□□ 1.93
SUSD1-204ENST00000374270 PLEKHH2Q8IVE3 1493 aa27.14■■□□□ 1.93
SUSD1-204ENST00000374270 CHD1O14646 1710 aa27.1■■□□□ 1.93
SUSD1-204ENST00000374270 RSPH4AQ5TD94 716 aa27.09■■□□□ 1.93
SUSD1-204ENST00000374270 CHGAP10645 457 aaKnown RBP27.08■■□□□ 1.93
SUSD1-204ENST00000374270 SPAG9O60271 1321 aaKnown RBP27.07■■□□□ 1.92
SUSD1-204ENST00000374270 RBM19Q9Y4C8 960 aaKnown RBP27.07■■□□□ 1.92
SUSD1-204ENST00000374270 SAMD9LQ8IVG5 1584 aa27.06■■□□□ 1.92
SUSD1-204ENST00000374270 ADGBQ8N7X0 1667 aa27.06■■□□□ 1.92
SUSD1-204ENST00000374270 KIF3BO15066 747 aa27.05■■□□□ 1.92
SUSD1-204ENST00000374270 ADCY10Q96PN6 1610 aa27.04■■□□□ 1.92
SUSD1-204ENST00000374270 DHX29Q7Z478 1369 aaKnown RBP27.04■■□□□ 1.92
SUSD1-204ENST00000374270 TTC37Q6PGP7 1564 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms