RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 PLCH2O75038 1416 aa26.78■■□□□ 1.88
C9orf43-202ENST00000374165 MIA2Q96PC5 1412 aa26.78■■□□□ 1.88
C9orf43-202ENST00000374165 PTPN23Q9H3S7 1636 aa26.78■■□□□ 1.88
C9orf43-202ENST00000374165 KIF13AQ9H1H9 1805 aa26.75■■□□□ 1.87
C9orf43-202ENST00000374165 CD109Q6YHK3 1445 aa26.74■■□□□ 1.87
C9orf43-202ENST00000374165 ARHGAP5Q13017 1502 aa26.74■■□□□ 1.87
C9orf43-202ENST00000374165 GLI2P10070 1586 aa26.74■■□□□ 1.87
C9orf43-202ENST00000374165 MAP3K4Q9Y6R4 1608 aa26.72■■□□□ 1.87
C9orf43-202ENST00000374165 TCOF1Q13428 1488 aaKnown RBP26.71■■□□□ 1.87
C9orf43-202ENST00000374165 ITGAEP38570 1179 aa26.7■■□□□ 1.87
C9orf43-202ENST00000374165 CAMSAP2Q08AD1 1489 aa26.7■■□□□ 1.86
C9orf43-202ENST00000374165 SAMD9LQ8IVG5 1584 aa26.69■■□□□ 1.86
C9orf43-202ENST00000374165 TSPOAP1O95153 1857 aa26.67■■□□□ 1.86
C9orf43-202ENST00000374165 EFCAB2Q5VUJ9 269 aa26.66■■□□□ 1.86
C9orf43-202ENST00000374165 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.66■■□□□ 1.86
C9orf43-202ENST00000374165 FANCAO15360 1455 aa26.66■■□□□ 1.86
C9orf43-202ENST00000374165 ARAP3Q8WWN8 1544 aa26.66■■□□□ 1.86
C9orf43-202ENST00000374165 HNRNPMP52272 730 aaKnown RBP eCLIP26.63■■□□□ 1.85
C9orf43-202ENST00000374165 PTPRKQ15262 1439 aa26.61■■□□□ 1.85
C9orf43-202ENST00000374165 ARHGEF12Q9NZN5 1544 aa26.6■■□□□ 1.85
C9orf43-202ENST00000374165 PPRC1Q5VV67 1664 aaKnown RBP26.6■■□□□ 1.85
C9orf43-202ENST00000374165 TRHP20396 242 aaPredicted RBP26.59■■□□□ 1.85
C9orf43-202ENST00000374165 SYCP2Q9BX26 1530 aa26.58■■□□□ 1.85
C9orf43-202ENST00000374165 MBD5Q9P267 1494 aa26.58■■□□□ 1.85
C9orf43-202ENST00000374165 ABCC5O15440 1437 aa26.56■■□□□ 1.84
C9orf43-202ENST00000374165 AKNAQ7Z591 1439 aa26.56■■□□□ 1.84
C9orf43-202ENST00000374165 ABCC1P33527 1531 aa26.55■■□□□ 1.84
C9orf43-202ENST00000374165 DNMT1P26358 1616 aaKnown RBP26.55■■□□□ 1.84
C9orf43-202ENST00000374165 DAPK1P53355 1430 aa26.54■■□□□ 1.84
C9orf43-202ENST00000374165 KIAA1107Q9UPP5 1409 aa26.53■■□□□ 1.84
C9orf43-202ENST00000374165 CHIC2Q9UKJ5 165 aa26.53■■□□□ 1.84
C9orf43-202ENST00000374165 ADGRL1O94910 1474 aa26.52■■□□□ 1.84
C9orf43-202ENST00000374165 TRAPPC8Q9Y2L5 1435 aa26.51■■□□□ 1.83
C9orf43-202ENST00000374165 SCAPERQ9BY12 1400 aa26.5■■□□□ 1.83
C9orf43-202ENST00000374165 PLEKHH2Q8IVE3 1493 aa26.5■■□□□ 1.83
C9orf43-202ENST00000374165 NEO1Q92859 1461 aa26.49■■□□□ 1.83
C9orf43-202ENST00000374165 AFAP1Q8N556 730 aa26.49■■□□□ 1.83
C9orf43-202ENST00000374165 ARHGEF5Q12774 1597 aa26.48■■□□□ 1.83
C9orf43-202ENST00000374165 CFAP74Q9C0B2 1584 aa26.48■■□□□ 1.83
C9orf43-202ENST00000374165 CROCC2H7BZ55 1655 aa26.46■■□□□ 1.83
C9orf43-202ENST00000374165 CCDC141Q6ZP82 1450 aa26.46■■□□□ 1.83
C9orf43-202ENST00000374165 TEX14Q8IWB6 1497 aa26.44■■□□□ 1.82
C9orf43-202ENST00000374165 RSPH4AQ5TD94 716 aa26.43■■□□□ 1.82
C9orf43-202ENST00000374165 RAPGEF3O95398 923 aa26.42■■□□□ 1.82
C9orf43-202ENST00000374165 TSPY4P0CV99 314 aa26.41■■□□□ 1.82
C9orf43-202ENST00000374165 TSPY10P0CW01 314 aa26.41■■□□□ 1.82
C9orf43-202ENST00000374165 RRP7BPQ9NSQ0 103 aa26.41■■□□□ 1.82
C9orf43-202ENST00000374165 C9orf84Q5VXU9 1444 aa26.39■■□□□ 1.82
C9orf43-202ENST00000374165 COL17A1Q9UMD9 1497 aaPredicted RBP26.37■■□□□ 1.81
C9orf43-202ENST00000374165 POGZQ7Z3K3 1410 aa26.36■■□□□ 1.81
C9orf43-202ENST00000374165 SHANK2Q9UPX8 1470 aa26.36■■□□□ 1.81
C9orf43-202ENST00000374165 DENND4BO75064 1496 aaPredicted RBP26.36■■□□□ 1.81
C9orf43-202ENST00000374165 NCOA1Q15788 1441 aa26.35■■□□□ 1.81
C9orf43-202ENST00000374165 ZNF518AQ6AHZ1 1483 aa26.35■■□□□ 1.81
C9orf43-202ENST00000374165 RICTORQ6R327 1708 aa26.35■■□□□ 1.81
C9orf43-202ENST00000374165 HRCP23327 699 aa26.34■■□□□ 1.81
C9orf43-202ENST00000374165 ADGBQ8N7X0 1667 aa26.33■■□□□ 1.8
C9orf43-202ENST00000374165 ROCK1Q13464 1354 aa26.33■■□□□ 1.8
C9orf43-202ENST00000374165 SPAG9O60271 1321 aaKnown RBP26.33■■□□□ 1.8
C9orf43-202ENST00000374165 ADGRL2O95490 1459 aa26.32■■□□□ 1.8
C9orf43-202ENST00000374165 NAIPQ13075 1403 aa26.32■■□□□ 1.8
C9orf43-202ENST00000374165 MAST1Q9Y2H9 1570 aa26.32■■□□□ 1.8
C9orf43-202ENST00000374165 HFM1A2PYH4 1435 aa26.31■■□□□ 1.8
C9orf43-202ENST00000374165 FRMPD1Q5SYB0 1578 aa26.31■■□□□ 1.8
C9orf43-202ENST00000374165 KDM5CP41229 1560 aa26.31■■□□□ 1.8
C9orf43-202ENST00000374165 ANKRD30AQ9BXX3 1397 aa26.29■■□□□ 1.8
C9orf43-202ENST00000374165 ZFYVE16Q7Z3T8 1539 aa26.29■■□□□ 1.8
C9orf43-202ENST00000374165 SETD5Q9C0A6 1442 aa26.27■■□□□ 1.8
C9orf43-202ENST00000374165 KIDINS220Q9ULH0 1771 aa26.27■■□□□ 1.8
C9orf43-202ENST00000374165 INO80Q9ULG1 1556 aaPredicted RBP26.27■■□□□ 1.8
C9orf43-202ENST00000374165 KDM6BO15054 1643 aa26.26■■□□□ 1.79
C9orf43-202ENST00000374165 RAB3GAP2Q9H2M9 1393 aa26.26■■□□□ 1.79
C9orf43-202ENST00000374165 ATP7AQ04656 1500 aa26.26■■□□□ 1.79
C9orf43-202ENST00000374165 MYT1LQ9UL68 1186 aa26.26■■□□□ 1.79
C9orf43-202ENST00000374165 RTEL1-TNFRSF6BF6WH68 1400 aa26.25■■□□□ 1.79
C9orf43-202ENST00000374165 KIF15Q9NS87 1388 aa26.24■■□□□ 1.79
C9orf43-202ENST00000374165 GCC2Q8IWJ2 1684 aa26.24■■□□□ 1.79
C9orf43-202ENST00000374165 MLH3Q9UHC1 1453 aa26.22■■□□□ 1.79
C9orf43-202ENST00000374165 PLXNC1O60486 1568 aa26.22■■□□□ 1.79
C9orf43-202ENST00000374165 HECW2Q9P2P5 1572 aa26.21■■□□□ 1.79
C9orf43-202ENST00000374165 YEATS2Q9ULM3 1422 aa26.18■■□□□ 1.78
C9orf43-202ENST00000374165 ZMYM4Q5VZL5 1548 aa26.17■■□□□ 1.78
C9orf43-202ENST00000374165 ANKRD50Q9ULJ7 1429 aa26.17■■□□□ 1.78
C9orf43-202ENST00000374165 ABCA6Q8N139 1617 aa26.16■■□□□ 1.78
C9orf43-202ENST00000374165 DUOX2Q9NRD8 1548 aa26.12■■□□□ 1.77
C9orf43-202ENST00000374165 DIP2CQ9Y2E4 1556 aa26.11■■□□□ 1.77
C9orf43-202ENST00000374165 MAGI2Q86UL8 1455 aa26.08■■□□□ 1.77
C9orf43-202ENST00000374165 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
C9orf43-202ENST00000374165 A2MP01023 1474 aa26.06■■□□□ 1.76
C9orf43-202ENST00000374165 ERBINQ96RT1 1412 aa26.05■■□□□ 1.76
C9orf43-202ENST00000374165 TRIM52Q96A61 297 aa26.02■■□□□ 1.76
C9orf43-202ENST00000374165 ATP10AO60312 1499 aa26■■□□□ 1.75
C9orf43-202ENST00000374165 KIF3BO15066 747 aa26■■□□□ 1.75
C9orf43-202ENST00000374165 SIGLEC1Q9BZZ2 1709 aa26■■□□□ 1.75
C9orf43-202ENST00000374165 ARHGEF40Q8TER5 1519 aa25.99■■□□□ 1.75
C9orf43-202ENST00000374165 DHX57Q6P158 1386 aaKnown RBP25.98■■□□□ 1.75
C9orf43-202ENST00000374165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.97■■□□□ 1.75
C9orf43-202ENST00000374165 NUP155O75694 1391 aa25.95■■□□□ 1.74
C9orf43-202ENST00000374165 EIF2AK4Q9P2K8 1649 aaKnown RBP25.95■■□□□ 1.74
C9orf43-202ENST00000374165 CCER1Q8TC90 406 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms