RNA–Protein interactions for RNA: ENST00000372440.6

KCNMA1-208, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 3,849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-208ENST00000372440 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
KCNMA1-208ENST00000372440 CHMP7Q8WUX9 453 aaPredicted RBP17.41■□□□□ 0.38
KCNMA1-208ENST00000372440 TIMELESSQ9UNS1 1208 aa17.41■□□□□ 0.38
KCNMA1-208ENST00000372440 NOP58Q9Y2X3 529 aaKnown RBP17.4■□□□□ 0.38
KCNMA1-208ENST00000372440 LRRC9Q6ZRR7 1453 aa17.39■□□□□ 0.38
KCNMA1-208ENST00000372440 TSPY4P0CV99 314 aa17.39■□□□□ 0.37
KCNMA1-208ENST00000372440 TSPY10P0CW01 314 aa17.39■□□□□ 0.37
KCNMA1-208ENST00000372440 AQRO60306 1485 aaKnown RBP eCLIP17.39■□□□□ 0.37
KCNMA1-208ENST00000372440 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
KCNMA1-208ENST00000372440 CCDC18Q5T9S5 1454 aa17.38■□□□□ 0.37
KCNMA1-208ENST00000372440 FMN1Q68DA7 1419 aa17.37■□□□□ 0.37
KCNMA1-208ENST00000372440 CHGAP10645 457 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-208ENST00000372440 CANXP27824 592 aaKnown RBP17.37■□□□□ 0.37
KCNMA1-208ENST00000372440 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
KCNMA1-208ENST00000372440 TIAM1Q13009 1591 aa17.35■□□□□ 0.37
KCNMA1-208ENST00000372440 PLIN1O60240 522 aa17.35■□□□□ 0.37
KCNMA1-208ENST00000372440 SAMD9Q5K651 1589 aa17.34■□□□□ 0.37
KCNMA1-208ENST00000372440 EIF5BO60841 1220 aaKnown RBP17.33■□□□□ 0.37
KCNMA1-208ENST00000372440 RGS3P49796 1198 aa17.33■□□□□ 0.36
KCNMA1-208ENST00000372440 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.36
KCNMA1-208ENST00000372440 NEUROD2Q15784 382 aa17.32■□□□□ 0.36
KCNMA1-208ENST00000372440 CASKIN1Q8WXD9 1431 aa17.32■□□□□ 0.36
KCNMA1-208ENST00000372440 CFAP43Q8NDM7 1665 aa17.31■□□□□ 0.36
KCNMA1-208ENST00000372440 EIF4G3O43432 1585 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-208ENST00000372440 PCF11O94913 1555 aaKnown RBP17.3■□□□□ 0.36
KCNMA1-208ENST00000372440 TNNT2P45379 298 aaPredicted RBP17.3■□□□□ 0.36
KCNMA1-208ENST00000372440 MAGI1Q96QZ7 1491 aaPredicted RBP17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 ZNF608Q9ULD9 1512 aaPredicted RBP17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 FGD6Q6ZV73 1430 aa17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 IQGAP2Q13576 1575 aa17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 SKAP1Q86WV1 359 aa17.29■□□□□ 0.36
KCNMA1-208ENST00000372440 SLC4A3P48751 1232 aa17.28■□□□□ 0.36
KCNMA1-208ENST00000372440 ST20-MTHFSA0A0A6YYL1 179 aa17.28■□□□□ 0.36
KCNMA1-208ENST00000372440 NEFMP07197 916 aa17.28■□□□□ 0.36
KCNMA1-208ENST00000372440 KIF7Q2M1P5 1343 aa17.27■□□□□ 0.35
KCNMA1-208ENST00000372440 PLEKHD1A6NEE1 506 aa17.26■□□□□ 0.35
KCNMA1-208ENST00000372440 SNAPC4Q5SXM2 1469 aa17.25■□□□□ 0.35
KCNMA1-208ENST00000372440 EXOC6Q8TAG9 804 aa17.25■□□□□ 0.35
KCNMA1-208ENST00000372440 WDR43Q15061 677 aaKnown RBP eCLIP17.24■□□□□ 0.35
KCNMA1-208ENST00000372440 HNRNPMP52272 730 aaKnown RBP eCLIP17.23■□□□□ 0.35
KCNMA1-208ENST00000372440 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
KCNMA1-208ENST00000372440 AKNAQ7Z591 1439 aa17.22■□□□□ 0.35
KCNMA1-208ENST00000372440 KIAA0586Q9BVV6 1533 aa17.22■□□□□ 0.35
KCNMA1-208ENST00000372440 UGGT2Q9NYU1 1516 aa17.22■□□□□ 0.35
KCNMA1-208ENST00000372440 GRIN2AQ12879 1464 aa17.22■□□□□ 0.35
KCNMA1-208ENST00000372440 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
KCNMA1-208ENST00000372440 SYNJ2O15056 1496 aa17.2■□□□□ 0.34
KCNMA1-208ENST00000372440 NUP155O75694 1391 aa17.19■□□□□ 0.34
KCNMA1-208ENST00000372440 CCDC7Q96M83 1385 aa17.18■□□□□ 0.34
KCNMA1-208ENST00000372440 RCAN3Q9UKA8 241 aa17.18■□□□□ 0.34
KCNMA1-208ENST00000372440 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
KCNMA1-208ENST00000372440 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
KCNMA1-208ENST00000372440 CDCA7LQ96GN5 454 aa17.16■□□□□ 0.34
KCNMA1-208ENST00000372440 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
KCNMA1-208ENST00000372440 PTPRKQ15262 1439 aa17.15■□□□□ 0.34
KCNMA1-208ENST00000372440 ZBED9Q6R2W3 1325 aa17.15■□□□□ 0.34
KCNMA1-208ENST00000372440 HECW1Q76N89 1606 aa17.14■□□□□ 0.33
KCNMA1-208ENST00000372440 CCDC146Q8IYE0 955 aa17.14■□□□□ 0.33
KCNMA1-208ENST00000372440 FRAT1Q92837 279 aaPredicted RBP17.14■□□□□ 0.33
KCNMA1-208ENST00000372440 USP47Q96K76 1375 aa17.12■□□□□ 0.33
KCNMA1-208ENST00000372440 SPRYD3Q8NCJ5 442 aa17.12■□□□□ 0.33
KCNMA1-208ENST00000372440 MYOM3Q5VTT5 1437 aa17.12■□□□□ 0.33
KCNMA1-208ENST00000372440 IPO9Q96P70 1041 aaKnown RBP17.1■□□□□ 0.33
KCNMA1-208ENST00000372440 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
KCNMA1-208ENST00000372440 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.1■□□□□ 0.33
KCNMA1-208ENST00000372440 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
KCNMA1-208ENST00000372440 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
KCNMA1-208ENST00000372440 KIAA0556O60303 1618 aa17.09■□□□□ 0.33
KCNMA1-208ENST00000372440 NAIPQ13075 1403 aa17.09■□□□□ 0.33
KCNMA1-208ENST00000372440 NUP160Q12769 1436 aa17.08■□□□□ 0.32
KCNMA1-208ENST00000372440 ROCK2O75116 1388 aaKnown RBP17.08■□□□□ 0.32
KCNMA1-208ENST00000372440 CNTLNQ9NXG0 1405 aa17.07■□□□□ 0.32
KCNMA1-208ENST00000372440 SAFB2Q14151 953 aaKnown RBP eCLIP17.05■□□□□ 0.32
KCNMA1-208ENST00000372440 CARMIL2Q6F5E8 1435 aa17.05■□□□□ 0.32
KCNMA1-208ENST00000372440 SUPT6HQ7KZ85 1726 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 NBPF1Q3BBV0 1214 aa17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 CRBNQ96SW2 442 aa17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 PANK3Q9H999 370 aa17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 DISP1Q96F81 1524 aa17.04■□□□□ 0.32
KCNMA1-208ENST00000372440 PDE4AP27815 886 aa17.03■□□□□ 0.32
KCNMA1-208ENST00000372440 HFM1A2PYH4 1435 aa17.01■□□□□ 0.31
KCNMA1-208ENST00000372440 RRP1P56182 461 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-208ENST00000372440 EPRSP07814 1512 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-208ENST00000372440 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
KCNMA1-208ENST00000372440 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
KCNMA1-208ENST00000372440 SLKQ9H2G2 1235 aaPredicted RBP17■□□□□ 0.31
KCNMA1-208ENST00000372440 BCL2L13Q9BXK5 485 aa16.99■□□□□ 0.31
KCNMA1-208ENST00000372440 RRP7AQ9Y3A4 280 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-208ENST00000372440 CLUAP1Q96AJ1 413 aa16.99■□□□□ 0.31
KCNMA1-208ENST00000372440 IL27Q8NEV9 243 aa16.98■□□□□ 0.31
KCNMA1-208ENST00000372440 ERICH6BQ5W0A0 696 aa16.98■□□□□ 0.31
KCNMA1-208ENST00000372440 KTN1Q86UP2 1357 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-208ENST00000372440 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
KCNMA1-208ENST00000372440 CDK13Q14004 1512 aaKnown RBP16.97■□□□□ 0.31
KCNMA1-208ENST00000372440 RAPGEF6Q8TEU7 1601 aa16.97■□□□□ 0.31
KCNMA1-208ENST00000372440 PPM1GO15355 546 aaPredicted RBP16.97■□□□□ 0.31
KCNMA1-208ENST00000372440 SLC24A1O60721 1099 aa16.97■□□□□ 0.31
KCNMA1-208ENST00000372440 NLRP13Q86W25 1043 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms