RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 CFDP1Q9UEE9 299 aaPredicted RBP25.11■■□□□ 1.61
SCP2-201ENST00000371509 ARHGAP5Q13017 1502 aa25.1■■□□□ 1.61
SCP2-201ENST00000371509 PLCH2O75038 1416 aa25.1■■□□□ 1.61
SCP2-201ENST00000371509 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
SCP2-201ENST00000371509 TSPOAP1O95153 1857 aa25.09■■□□□ 1.61
SCP2-201ENST00000371509 RRBP1Q9P2E9 1410 aaKnown RBP25.08■■□□□ 1.61
SCP2-201ENST00000371509 PTPN23Q9H3S7 1636 aa25.08■■□□□ 1.6
SCP2-201ENST00000371509 ZNF644Q9H582 1327 aaPredicted RBP25.07■■□□□ 1.6
SCP2-201ENST00000371509 MIA2Q96PC5 1412 aa25.07■■□□□ 1.6
SCP2-201ENST00000371509 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
SCP2-201ENST00000371509 ZEB1P37275 1124 aaPredicted RBP25.05■■□□□ 1.6
SCP2-201ENST00000371509 FAM50AQ14320 339 aaKnown RBP25.05■■□□□ 1.6
SCP2-201ENST00000371509 SAMD9LQ8IVG5 1584 aa25.02■■□□□ 1.6
SCP2-201ENST00000371509 FANCAO15360 1455 aa25.02■■□□□ 1.6
SCP2-201ENST00000371509 ARAP3Q8WWN8 1544 aa25.02■■□□□ 1.6
SCP2-201ENST00000371509 CAMSAP2Q08AD1 1489 aa25.01■■□□□ 1.59
SCP2-201ENST00000371509 PPRC1Q5VV67 1664 aaKnown RBP25.01■■□□□ 1.59
SCP2-201ENST00000371509 EFCAB2Q5VUJ9 269 aa25■■□□□ 1.59
SCP2-201ENST00000371509 TCOF1Q13428 1488 aaKnown RBP24.99■■□□□ 1.59
SCP2-201ENST00000371509 ITGAEP38570 1179 aa24.96■■□□□ 1.59
SCP2-201ENST00000371509 CFAP74Q9C0B2 1584 aa24.93■■□□□ 1.58
SCP2-201ENST00000371509 SYCP2Q9BX26 1530 aa24.93■■□□□ 1.58
SCP2-201ENST00000371509 HNRNPMP52272 730 aaKnown RBP eCLIP24.93■■□□□ 1.58
SCP2-201ENST00000371509 AKNAQ7Z591 1439 aa24.92■■□□□ 1.58
SCP2-201ENST00000371509 ABCC1P33527 1531 aa24.92■■□□□ 1.58
SCP2-201ENST00000371509 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
SCP2-201ENST00000371509 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.91■■□□□ 1.58
SCP2-201ENST00000371509 ADGRL1O94910 1474 aa24.89■■□□□ 1.58
SCP2-201ENST00000371509 TEX14Q8IWB6 1497 aa24.89■■□□□ 1.57
SCP2-201ENST00000371509 NEO1Q92859 1461 aa24.88■■□□□ 1.57
SCP2-201ENST00000371509 MBD5Q9P267 1494 aa24.88■■□□□ 1.57
SCP2-201ENST00000371509 PLEKHH2Q8IVE3 1493 aa24.87■■□□□ 1.57
SCP2-201ENST00000371509 DNMT1P26358 1616 aaKnown RBP24.86■■□□□ 1.57
SCP2-201ENST00000371509 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
SCP2-201ENST00000371509 KIAA1107Q9UPP5 1409 aa24.86■■□□□ 1.57
SCP2-201ENST00000371509 ABCC5O15440 1437 aa24.84■■□□□ 1.57
SCP2-201ENST00000371509 DAPK1P53355 1430 aa24.84■■□□□ 1.57
SCP2-201ENST00000371509 PTPRKQ15262 1439 aa24.84■■□□□ 1.57
SCP2-201ENST00000371509 TRAPPC8Q9Y2L5 1435 aa24.83■■□□□ 1.57
SCP2-201ENST00000371509 ARHGEF5Q12774 1597 aa24.82■■□□□ 1.56
SCP2-201ENST00000371509 CCER1Q8TC90 406 aaPredicted RBP24.82■■□□□ 1.56
SCP2-201ENST00000371509 CROCC2H7BZ55 1655 aa24.81■■□□□ 1.56
SCP2-201ENST00000371509 AFAP1Q8N556 730 aa24.8■■□□□ 1.56
SCP2-201ENST00000371509 CHIC2Q9UKJ5 165 aa24.8■■□□□ 1.56
SCP2-201ENST00000371509 CCDC141Q6ZP82 1450 aa24.8■■□□□ 1.56
SCP2-201ENST00000371509 RAPGEF3O95398 923 aa24.77■■□□□ 1.56
SCP2-201ENST00000371509 DENND4BO75064 1496 aaPredicted RBP24.76■■□□□ 1.55
SCP2-201ENST00000371509 POGZQ7Z3K3 1410 aa24.75■■□□□ 1.55
SCP2-201ENST00000371509 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
SCP2-201ENST00000371509 TSPY4P0CV99 314 aa24.74■■□□□ 1.55
SCP2-201ENST00000371509 TSPY10P0CW01 314 aa24.74■■□□□ 1.55
SCP2-201ENST00000371509 RICTORQ6R327 1708 aa24.74■■□□□ 1.55
SCP2-201ENST00000371509 COL17A1Q9UMD9 1497 aaPredicted RBP24.73■■□□□ 1.55
SCP2-201ENST00000371509 ZNF518AQ6AHZ1 1483 aa24.73■■□□□ 1.55
SCP2-201ENST00000371509 C9orf84Q5VXU9 1444 aa24.73■■□□□ 1.55
SCP2-201ENST00000371509 FRMPD1Q5SYB0 1578 aa24.72■■□□□ 1.55
SCP2-201ENST00000371509 SHANK2Q9UPX8 1470 aa24.7■■□□□ 1.54
SCP2-201ENST00000371509 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
SCP2-201ENST00000371509 SPAG9O60271 1321 aaKnown RBP24.69■■□□□ 1.54
SCP2-201ENST00000371509 RRP7BPQ9NSQ0 103 aa24.68■■□□□ 1.54
SCP2-201ENST00000371509 KDM5CP41229 1560 aa24.68■■□□□ 1.54
SCP2-201ENST00000371509 MYT1LQ9UL68 1186 aa24.68■■□□□ 1.54
SCP2-201ENST00000371509 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
SCP2-201ENST00000371509 ZFYVE16Q7Z3T8 1539 aa24.66■■□□□ 1.54
SCP2-201ENST00000371509 INO80Q9ULG1 1556 aaPredicted RBP24.65■■□□□ 1.54
SCP2-201ENST00000371509 KDM6BO15054 1643 aa24.65■■□□□ 1.54
SCP2-201ENST00000371509 ATP7AQ04656 1500 aa24.64■■□□□ 1.53
SCP2-201ENST00000371509 KIDINS220Q9ULH0 1771 aa24.64■■□□□ 1.53
SCP2-201ENST00000371509 ADGRL2O95490 1459 aa24.63■■□□□ 1.53
SCP2-201ENST00000371509 HECW2Q9P2P5 1572 aa24.63■■□□□ 1.53
SCP2-201ENST00000371509 NCOA1Q15788 1441 aa24.63■■□□□ 1.53
SCP2-201ENST00000371509 ANKRD30AQ9BXX3 1397 aa24.62■■□□□ 1.53
SCP2-201ENST00000371509 ROCK1Q13464 1354 aa24.62■■□□□ 1.53
SCP2-201ENST00000371509 RTEL1-TNFRSF6BF6WH68 1400 aa24.6■■□□□ 1.53
SCP2-201ENST00000371509 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
SCP2-201ENST00000371509 ZMYM4Q5VZL5 1548 aa24.59■■□□□ 1.53
SCP2-201ENST00000371509 PLXNC1O60486 1568 aa24.58■■□□□ 1.53
SCP2-201ENST00000371509 HFM1A2PYH4 1435 aa24.58■■□□□ 1.53
SCP2-201ENST00000371509 NAIPQ13075 1403 aa24.58■■□□□ 1.53
SCP2-201ENST00000371509 KIF15Q9NS87 1388 aa24.58■■□□□ 1.53
SCP2-201ENST00000371509 GCC2Q8IWJ2 1684 aa24.58■■□□□ 1.52
SCP2-201ENST00000371509 YEATS2Q9ULM3 1422 aa24.56■■□□□ 1.52
SCP2-201ENST00000371509 ABCA6Q8N139 1617 aa24.56■■□□□ 1.52
SCP2-201ENST00000371509 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
SCP2-201ENST00000371509 DIP2CQ9Y2E4 1556 aa24.52■■□□□ 1.52
SCP2-201ENST00000371509 DHX57Q6P158 1386 aaKnown RBP24.5■■□□□ 1.51
SCP2-201ENST00000371509 RAB3GAP2Q9H2M9 1393 aa24.5■■□□□ 1.51
SCP2-201ENST00000371509 MAGI2Q86UL8 1455 aa24.5■■□□□ 1.51
SCP2-201ENST00000371509 DUOX2Q9NRD8 1548 aa24.49■■□□□ 1.51
SCP2-201ENST00000371509 ANKRD50Q9ULJ7 1429 aa24.49■■□□□ 1.51
SCP2-201ENST00000371509 A2MP01023 1474 aa24.46■■□□□ 1.51
SCP2-201ENST00000371509 CLSPNQ9HAW4 1339 aa24.45■■□□□ 1.51
SCP2-201ENST00000371509 ARHGEF40Q8TER5 1519 aa24.45■■□□□ 1.5
SCP2-201ENST00000371509 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
SCP2-201ENST00000371509 ATP10AO60312 1499 aa24.42■■□□□ 1.5
SCP2-201ENST00000371509 ERBINQ96RT1 1412 aa24.42■■□□□ 1.5
SCP2-201ENST00000371509 SIGLEC1Q9BZZ2 1709 aa24.4■■□□□ 1.5
SCP2-201ENST00000371509 KIF3BO15066 747 aa24.37■■□□□ 1.49
SCP2-201ENST00000371509 EIF2AK4Q9P2K8 1649 aaKnown RBP24.36■■□□□ 1.49
SCP2-201ENST00000371509 TRIM52Q96A61 297 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms