RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 ARHGAP5Q13017 1502 aa27.04■■□□□ 1.92
VPS37B-202ENST00000371248 FGD6Q6ZV73 1430 aa27.02■■□□□ 1.92
VPS37B-202ENST00000371248 ARAP3Q8WWN8 1544 aa27.01■■□□□ 1.91
VPS37B-202ENST00000371248 ZNF777Q9ULD5 760 aaPredicted RBP27.01■■□□□ 1.91
VPS37B-202ENST00000371248 MIA2Q96PC5 1412 aa27.01■■□□□ 1.91
VPS37B-202ENST00000371248 EFCAB2Q5VUJ9 269 aa26.99■■□□□ 1.91
VPS37B-202ENST00000371248 PPRC1Q5VV67 1664 aaKnown RBP26.98■■□□□ 1.91
VPS37B-202ENST00000371248 FANCAO15360 1455 aa26.98■■□□□ 1.91
VPS37B-202ENST00000371248 PTPN23Q9H3S7 1636 aa26.97■■□□□ 1.91
VPS37B-202ENST00000371248 ZNF644Q9H582 1327 aaPredicted RBP26.96■■□□□ 1.91
VPS37B-202ENST00000371248 RRBP1Q9P2E9 1410 aaKnown RBP26.94■■□□□ 1.9
VPS37B-202ENST00000371248 SAMD9LQ8IVG5 1584 aa26.93■■□□□ 1.9
VPS37B-202ENST00000371248 FAM50AQ14320 339 aaKnown RBP26.93■■□□□ 1.9
VPS37B-202ENST00000371248 CFAP74Q9C0B2 1584 aa26.92■■□□□ 1.9
VPS37B-202ENST00000371248 CAMSAP2Q08AD1 1489 aa26.92■■□□□ 1.9
VPS37B-202ENST00000371248 TEX14Q8IWB6 1497 aa26.91■■□□□ 1.9
VPS37B-202ENST00000371248 TCOF1Q13428 1488 aaKnown RBP26.9■■□□□ 1.9
VPS37B-202ENST00000371248 AKNAQ7Z591 1439 aa26.9■■□□□ 1.9
VPS37B-202ENST00000371248 NEO1Q92859 1461 aa26.89■■□□□ 1.89
VPS37B-202ENST00000371248 ADGRL1O94910 1474 aa26.85■■□□□ 1.89
VPS37B-202ENST00000371248 HNRNPMP52272 730 aaKnown RBP eCLIP26.85■■□□□ 1.893e-7■■■■□ 24.6
VPS37B-202ENST00000371248 ABCC1P33527 1531 aa26.84■■□□□ 1.89
VPS37B-202ENST00000371248 PLEKHH2Q8IVE3 1493 aa26.84■■□□□ 1.89
VPS37B-202ENST00000371248 SYCP2Q9BX26 1530 aa26.83■■□□□ 1.89
VPS37B-202ENST00000371248 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.82■■□□□ 1.88
VPS37B-202ENST00000371248 ARHGEF12Q9NZN5 1544 aa26.82■■□□□ 1.88
VPS37B-202ENST00000371248 SCAPERQ9BY12 1400 aa26.81■■□□□ 1.88
VPS37B-202ENST00000371248 KIAA1107Q9UPP5 1409 aa26.81■■□□□ 1.88
VPS37B-202ENST00000371248 TRIM26Q12899 539 aaPredicted RBP26.81■■□□□ 1.88
VPS37B-202ENST00000371248 MBD5Q9P267 1494 aa26.79■■□□□ 1.88
VPS37B-202ENST00000371248 ITGAEP38570 1179 aa26.78■■□□□ 1.88
VPS37B-202ENST00000371248 DNMT1P26358 1616 aaKnown RBP26.75■■□□□ 1.87
VPS37B-202ENST00000371248 ARHGEF5Q12774 1597 aa26.75■■□□□ 1.87
VPS37B-202ENST00000371248 RSPH4AQ5TD94 716 aa26.74■■□□□ 1.87
VPS37B-202ENST00000371248 TRAPPC8Q9Y2L5 1435 aa26.74■■□□□ 1.87
VPS37B-202ENST00000371248 DENND4BO75064 1496 aaPredicted RBP26.73■■□□□ 1.87
VPS37B-202ENST00000371248 DAPK1P53355 1430 aa26.72■■□□□ 1.87
VPS37B-202ENST00000371248 AFAP1Q8N556 730 aa26.72■■□□□ 1.87
VPS37B-202ENST00000371248 CCDC141Q6ZP82 1450 aa26.72■■□□□ 1.87
VPS37B-202ENST00000371248 ABCC5O15440 1437 aa26.72■■□□□ 1.87
VPS37B-202ENST00000371248 RAPGEF3O95398 923 aa26.71■■□□□ 1.87
VPS37B-202ENST00000371248 POGZQ7Z3K3 1410 aa26.69■■□□□ 1.86
VPS37B-202ENST00000371248 COL17A1Q9UMD9 1497 aaPredicted RBP26.69■■□□□ 1.86
VPS37B-202ENST00000371248 CROCC2H7BZ55 1655 aa26.69■■□□□ 1.86
VPS37B-202ENST00000371248 RICTORQ6R327 1708 aa26.69■■□□□ 1.86
VPS37B-202ENST00000371248 TSPY4P0CV99 314 aa26.69■■□□□ 1.86
VPS37B-202ENST00000371248 TSPY10P0CW01 314 aa26.69■■□□□ 1.86
VPS37B-202ENST00000371248 ZNF518AQ6AHZ1 1483 aa26.68■■□□□ 1.86
VPS37B-202ENST00000371248 PTPRKQ15262 1439 aa26.67■■□□□ 1.86
VPS37B-202ENST00000371248 CHIC2Q9UKJ5 165 aa26.66■■□□□ 1.86
VPS37B-202ENST00000371248 KDM6BO15054 1643 aa26.64■■□□□ 1.85
VPS37B-202ENST00000371248 FRMPD1Q5SYB0 1578 aa26.64■■□□□ 1.85
VPS37B-202ENST00000371248 KDM5CP41229 1560 aa26.62■■□□□ 1.85
VPS37B-202ENST00000371248 SPAG9O60271 1321 aaKnown RBP26.62■■□□□ 1.85
VPS37B-202ENST00000371248 C9orf84Q5VXU9 1444 aa26.61■■□□□ 1.85
VPS37B-202ENST00000371248 SHANK2Q9UPX8 1470 aa26.61■■□□□ 1.85
VPS37B-202ENST00000371248 MYT1LQ9UL68 1186 aa26.61■■□□□ 1.85
VPS37B-202ENST00000371248 PCGF6Q9BYE7 350 aa26.6■■□□□ 1.85
VPS37B-202ENST00000371248 MAST1Q9Y2H9 1570 aa26.59■■□□□ 1.85
VPS37B-202ENST00000371248 ADGBQ8N7X0 1667 aa26.58■■□□□ 1.84
VPS37B-202ENST00000371248 KIDINS220Q9ULH0 1771 aa26.56■■□□□ 1.84
VPS37B-202ENST00000371248 HECW2Q9P2P5 1572 aa26.56■■□□□ 1.84
VPS37B-202ENST00000371248 INO80Q9ULG1 1556 aaPredicted RBP26.56■■□□□ 1.84
VPS37B-202ENST00000371248 ATP7AQ04656 1500 aa26.55■■□□□ 1.84
VPS37B-202ENST00000371248 ZFYVE16Q7Z3T8 1539 aa26.55■■□□□ 1.84
VPS37B-202ENST00000371248 RTEL1-TNFRSF6BF6WH68 1400 aa26.55■■□□□ 1.84
VPS37B-202ENST00000371248 MLH3Q9UHC1 1453 aa26.55■■□□□ 1.84
VPS37B-202ENST00000371248 ZMYM4Q5VZL5 1548 aa26.54■■□□□ 1.84
VPS37B-202ENST00000371248 RRP7BPQ9NSQ0 103 aa26.53■■□□□ 1.84
VPS37B-202ENST00000371248 ADGRL2O95490 1459 aa26.53■■□□□ 1.84
VPS37B-202ENST00000371248 ANKRD30AQ9BXX3 1397 aa26.52■■□□□ 1.84
VPS37B-202ENST00000371248 NCOA1Q15788 1441 aa26.52■■□□□ 1.84
VPS37B-202ENST00000371248 ROCK1Q13464 1354 aa26.51■■□□□ 1.83
VPS37B-202ENST00000371248 MAGI2Q86UL8 1455 aa26.49■■□□□ 1.83
VPS37B-202ENST00000371248 PLXNC1O60486 1568 aa26.49■■□□□ 1.83
VPS37B-202ENST00000371248 YEATS2Q9ULM3 1422 aa26.47■■□□□ 1.83
VPS37B-202ENST00000371248 ABCA6Q8N139 1617 aa26.46■■□□□ 1.83
VPS37B-202ENST00000371248 KIF15Q9NS87 1388 aa26.45■■□□□ 1.83
VPS37B-202ENST00000371248 DIP2CQ9Y2E4 1556 aa26.43■■□□□ 1.82
VPS37B-202ENST00000371248 HFM1A2PYH4 1435 aa26.43■■□□□ 1.82
VPS37B-202ENST00000371248 NAIPQ13075 1403 aa26.42■■□□□ 1.82
VPS37B-202ENST00000371248 GCC2Q8IWJ2 1684 aa26.41■■□□□ 1.82
VPS37B-202ENST00000371248 DUOX2Q9NRD8 1548 aa26.4■■□□□ 1.82
VPS37B-202ENST00000371248 ARHGEF40Q8TER5 1519 aa26.39■■□□□ 1.82
VPS37B-202ENST00000371248 SETD5Q9C0A6 1442 aa26.37■■□□□ 1.81
VPS37B-202ENST00000371248 ATP10AO60312 1499 aa26.37■■□□□ 1.81
VPS37B-202ENST00000371248 A2MP01023 1474 aa26.37■■□□□ 1.81
VPS37B-202ENST00000371248 DHX29Q7Z478 1369 aaKnown RBP26.36■■□□□ 1.81
VPS37B-202ENST00000371248 ANKRD50Q9ULJ7 1429 aa26.36■■□□□ 1.81
VPS37B-202ENST00000371248 ERBINQ96RT1 1412 aa26.31■■□□□ 1.8
VPS37B-202ENST00000371248 RAB3GAP2Q9H2M9 1393 aa26.31■■□□□ 1.8
VPS37B-202ENST00000371248 REREQ9P2R6 1566 aa26.29■■□□□ 1.8
VPS37B-202ENST00000371248 SIGLEC1Q9BZZ2 1709 aa26.27■■□□□ 1.8
VPS37B-202ENST00000371248 KIF3BO15066 747 aa26.26■■□□□ 1.79
VPS37B-202ENST00000371248 EIF2AK4Q9P2K8 1649 aaKnown RBP26.26■■□□□ 1.79
VPS37B-202ENST00000371248 BCORL1Q5H9F3 1711 aa26.21■■□□□ 1.79
VPS37B-202ENST00000371248 AGLP35573 1532 aa26.21■■□□□ 1.79
VPS37B-202ENST00000371248 HRCP23327 699 aa26.21■■□□□ 1.79
VPS37B-202ENST00000371248 ARID4BQ4LE39 1312 aaPredicted RBP26.21■■□□□ 1.79
VPS37B-202ENST00000371248 GGT6Q6P531 493 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms