RNA–Protein interactions for RNA: ENST00000368913.7

SEMA6C-203, Transcript of semaphorin 6C, humanhuman

APPRIS P1 TSL 1 (best)

Gene SEMA6C, Length 3,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-203ENST00000368913 TSPY10P0CW01 314 aa16.66■□□□□ 0.26
SEMA6C-203ENST00000368913 AMER1Q5JTC6 1135 aaPredicted RBP16.66■□□□□ 0.26
SEMA6C-203ENST00000368913 JPH4Q96JJ6 628 aa16.65■□□□□ 0.26
SEMA6C-203ENST00000368913 CHGAP10645 457 aaKnown RBP16.65■□□□□ 0.26
SEMA6C-203ENST00000368913 CHMP4BQ9H444 224 aaKnown RBP16.64■□□□□ 0.25
SEMA6C-203ENST00000368913 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.25
SEMA6C-203ENST00000368913 B4GALNT3Q6L9W6 998 aa16.63■□□□□ 0.25
SEMA6C-203ENST00000368913 DHX37Q8IY37 1157 aaKnown RBP16.61■□□□□ 0.25
SEMA6C-203ENST00000368913 ARXQ96QS3 562 aa16.61■□□□□ 0.25
SEMA6C-203ENST00000368913 RGS3P49796 1198 aa16.6■□□□□ 0.25
SEMA6C-203ENST00000368913 FMN1Q68DA7 1419 aa16.59■□□□□ 0.25
SEMA6C-203ENST00000368913 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
SEMA6C-203ENST00000368913 MPHOSPH9Q99550 1183 aa16.58■□□□□ 0.25
SEMA6C-203ENST00000368913 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-203ENST00000368913 URB2Q14146 1524 aaKnown RBP16.58■□□□□ 0.24
SEMA6C-203ENST00000368913 PPP1R15AO75807 674 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-203ENST00000368913 BBXQ8WY36 941 aaPredicted RBP16.57■□□□□ 0.24
SEMA6C-203ENST00000368913 L3MBTL2Q969R5 705 aa16.57■□□□□ 0.24
SEMA6C-203ENST00000368913 HSPA5P11021 654 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-203ENST00000368913 EIF4G2P78344 907 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEMA6C-203ENST00000368913 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
SEMA6C-203ENST00000368913 PKD2Q13563 968 aa16.54■□□□□ 0.24
SEMA6C-203ENST00000368913 ERICH3Q5RHP9 1530 aa16.54■□□□□ 0.24
SEMA6C-203ENST00000368913 ZNF608Q9ULD9 1512 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-203ENST00000368913 MRS2Q9HD23 443 aa16.54■□□□□ 0.24
SEMA6C-203ENST00000368913 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-203ENST00000368913 USP35Q9P2H5 1018 aa16.53■□□□□ 0.24
SEMA6C-203ENST00000368913 NAP1L2Q9ULW6 460 aaPredicted RBP16.52■□□□□ 0.24
SEMA6C-203ENST00000368913 DCAF11Q8TEB1 546 aa16.5■□□□□ 0.23
SEMA6C-203ENST00000368913 ARID3AQ99856 593 aa16.49■□□□□ 0.23
SEMA6C-203ENST00000368913 BIVM-ERCC5R4GMW8 1640 aa16.48■□□□□ 0.23
SEMA6C-203ENST00000368913 GSE1Q14687 1217 aa16.47■□□□□ 0.23
SEMA6C-203ENST00000368913 PLCD3Q8N3E9 789 aa16.47■□□□□ 0.23
SEMA6C-203ENST00000368913 FGD6Q6ZV73 1430 aa16.46■□□□□ 0.23
SEMA6C-203ENST00000368913 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-203ENST00000368913 FRAT1Q92837 279 aaPredicted RBP16.45■□□□□ 0.22
SEMA6C-203ENST00000368913 RRBP1Q9P2E9 1410 aaKnown RBP16.45■□□□□ 0.22
SEMA6C-203ENST00000368913 PCF11O94913 1555 aaKnown RBP16.44■□□□□ 0.22
SEMA6C-203ENST00000368913 DNMBPQ6XZF7 1577 aa16.44■□□□□ 0.22
SEMA6C-203ENST00000368913 CARD11Q9BXL7 1154 aa16.44■□□□□ 0.22
SEMA6C-203ENST00000368913 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
SEMA6C-203ENST00000368913 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
SEMA6C-203ENST00000368913 CCDC18Q5T9S5 1454 aa16.42■□□□□ 0.22
SEMA6C-203ENST00000368913 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
SEMA6C-203ENST00000368913 HAP1P54257 671 aaPredicted RBP16.41■□□□□ 0.22
SEMA6C-203ENST00000368913 ABCA10Q8WWZ4 1543 aa16.41■□□□□ 0.22
SEMA6C-203ENST00000368913 PRG4Q92954 1404 aaPredicted RBP16.4■□□□□ 0.22
SEMA6C-203ENST00000368913 NUP155O75694 1391 aa16.4■□□□□ 0.22
SEMA6C-203ENST00000368913 RRP9O43818 475 aaKnown RBP16.4■□□□□ 0.22
SEMA6C-203ENST00000368913 CASKIN1Q8WXD9 1431 aa16.4■□□□□ 0.22
SEMA6C-203ENST00000368913 WASHC2AQ641Q2 1341 aa16.39■□□□□ 0.21
SEMA6C-203ENST00000368913 FAM43AQ8N2R8 423 aa16.39■□□□□ 0.21
SEMA6C-203ENST00000368913 NUTM2DQ5VT03 806 aaPredicted RBP16.38■□□□□ 0.21
SEMA6C-203ENST00000368913 SNAPC4Q5SXM2 1469 aa16.37■□□□□ 0.21
SEMA6C-203ENST00000368913 NPM1P06748 294 aaKnown RBP eCLIP16.37■□□□□ 0.21
SEMA6C-203ENST00000368913 TMC1Q8TDI8 760 aa16.37■□□□□ 0.21
SEMA6C-203ENST00000368913 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
SEMA6C-203ENST00000368913 WASHC2CQ9Y4E1 1318 aa16.36■□□□□ 0.21
SEMA6C-203ENST00000368913 PTPRKQ15262 1439 aa16.35■□□□□ 0.21
SEMA6C-203ENST00000368913 MYOM3Q5VTT5 1437 aa16.35■□□□□ 0.21
SEMA6C-203ENST00000368913 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
SEMA6C-203ENST00000368913 PPP4R2Q9NY27 417 aa16.35■□□□□ 0.21
SEMA6C-203ENST00000368913 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
SEMA6C-203ENST00000368913 MAPK8IP2Q13387 824 aaPredicted RBP16.34■□□□□ 0.21
SEMA6C-203ENST00000368913 ZHX1Q9UKY1 873 aaPredicted RBP16.33■□□□□ 0.21
SEMA6C-203ENST00000368913 WDR97A6NE52 1622 aa16.33■□□□□ 0.2
SEMA6C-203ENST00000368913 CCDC184Q52MB2 194 aa16.32■□□□□ 0.2
SEMA6C-203ENST00000368913 GRIN2BQ13224 1484 aa16.32■□□□□ 0.2
SEMA6C-203ENST00000368913 PLB1Q6P1J6 1458 aa16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 NBPF8Q3BBV2 869 aa16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 RRAGDQ9NQL2 400 aaPredicted RBP16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 CARMIL2Q6F5E8 1435 aa16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 VGLL3A8MV65 326 aa16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 MRC2Q9UBG0 1479 aa16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
SEMA6C-203ENST00000368913 GGT6Q6P531 493 aa16.3■□□□□ 0.2
SEMA6C-203ENST00000368913 SAFB2Q14151 953 aaKnown RBP eCLIP16.3■□□□□ 0.2
SEMA6C-203ENST00000368913 PTPRGP23470 1445 aa16.29■□□□□ 0.2
SEMA6C-203ENST00000368913 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
SEMA6C-203ENST00000368913 SLC4A3P48751 1232 aa16.28■□□□□ 0.2
SEMA6C-203ENST00000368913 CHMP4AQ9BY43 222 aa16.28■□□□□ 0.2
SEMA6C-203ENST00000368913 FYCO1Q9BQS8 1478 aa16.27■□□□□ 0.2
SEMA6C-203ENST00000368913 MLECQ14165 292 aa16.27■□□□□ 0.2
SEMA6C-203ENST00000368913 AFAP1Q8N556 730 aa16.26■□□□□ 0.19
SEMA6C-203ENST00000368913 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
SEMA6C-203ENST00000368913 LAMC3Q9Y6N6 1575 aa16.24■□□□□ 0.19
SEMA6C-203ENST00000368913 KIF21AQ7Z4S6 1674 aa16.23■□□□□ 0.19
SEMA6C-203ENST00000368913 GTF2E1P29083 439 aaPredicted RBP16.23■□□□□ 0.19
SEMA6C-203ENST00000368913 KIF3BO15066 747 aa16.22■□□□□ 0.19
SEMA6C-203ENST00000368913 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
SEMA6C-203ENST00000368913 NAIPQ13075 1403 aa16.22■□□□□ 0.19
SEMA6C-203ENST00000368913 EPRSP07814 1512 aaKnown RBP16.21■□□□□ 0.19
SEMA6C-203ENST00000368913 NFKBIBQ15653 356 aa16.21■□□□□ 0.18
SEMA6C-203ENST00000368913 PRDM10Q9NQV6 1147 aa16.21■□□□□ 0.18
SEMA6C-203ENST00000368913 ANKRD30AQ9BXX3 1397 aa16.19■□□□□ 0.18
SEMA6C-203ENST00000368913 STAG3Q9UJ98 1225 aa16.19■□□□□ 0.18
SEMA6C-203ENST00000368913 UACAQ9BZF9 1416 aa16.18■□□□□ 0.18
SEMA6C-203ENST00000368913 CYB5RLQ6IPT4 315 aa16.18■□□□□ 0.18
SEMA6C-203ENST00000368913 NEUROD2Q15784 382 aa16.18■□□□□ 0.18
SEMA6C-203ENST00000368913 PRDM4Q9UKN5 801 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms