RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CCDC136Q96JN2 1154 aa12.72□□□□□ -0.37
CALD1-202ENST00000361901 PBRM1Q86U86 1689 aa12.7□□□□□ -0.38
CALD1-202ENST00000361901 PLPPR3Q6T4P5 718 aa12.69□□□□□ -0.38
CALD1-202ENST00000361901 NUP155O75694 1391 aa12.69□□□□□ -0.38
CALD1-202ENST00000361901 PPP1R15AO75807 674 aaPredicted RBP12.69□□□□□ -0.38
CALD1-202ENST00000361901 EFCAB2Q5VUJ9 269 aa12.69□□□□□ -0.38
CALD1-202ENST00000361901 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
CALD1-202ENST00000361901 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
CALD1-202ENST00000361901 L3MBTL2Q969R5 705 aa12.67□□□□□ -0.38
CALD1-202ENST00000361901 EIF4G2P78344 907 aaKnown RBP eCLIP12.67□□□□□ -0.38
CALD1-202ENST00000361901 ANKRD30AQ9BXX3 1397 aa12.67□□□□□ -0.38
CALD1-202ENST00000361901 EHBP1L1Q8N3D4 1523 aa12.66□□□□□ -0.38
CALD1-202ENST00000361901 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
CALD1-202ENST00000361901 TROQ12816 1431 aaPredicted RBP12.65□□□□□ -0.38
CALD1-202ENST00000361901 MAP3K1Q13233 1512 aa12.64□□□□□ -0.39
CALD1-202ENST00000361901 DCAF11Q8TEB1 546 aa12.64□□□□□ -0.39
CALD1-202ENST00000361901 PTPRKQ15262 1439 aa12.64□□□□□ -0.39
CALD1-202ENST00000361901 SUPT6HQ7KZ85 1726 aaKnown RBP12.63□□□□□ -0.39
CALD1-202ENST00000361901 RTL5Q5HYW3 569 aaPredicted RBP12.63□□□□□ -0.39
CALD1-202ENST00000361901 DISP1Q96F81 1524 aa12.62□□□□□ -0.39
CALD1-202ENST00000361901 AFAP1Q8N556 730 aa12.62□□□□□ -0.39
CALD1-202ENST00000361901 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.62□□□□□ -0.39
CALD1-202ENST00000361901 NUP153P49790 1475 aaKnown RBP12.62□□□□□ -0.39
CALD1-202ENST00000361901 SLC24A1O60721 1099 aa12.61□□□□□ -0.39
CALD1-202ENST00000361901 GGT6Q6P531 493 aa12.61□□□□□ -0.39
CALD1-202ENST00000361901 SENP3-EIF4A1A0A087X0R7 540 aa12.61□□□□□ -0.39
CALD1-202ENST00000361901 RTN4Q9NQC3 1192 aaKnown RBP12.61□□□□□ -0.39
CALD1-202ENST00000361901 ARHGEF11O15085 1522 aa12.61□□□□□ -0.39
CALD1-202ENST00000361901 WDR97A6NE52 1622 aa12.61□□□□□ -0.39
CALD1-202ENST00000361901 HSPA5P11021 654 aaKnown RBP12.6□□□□□ -0.39
CALD1-202ENST00000361901 NAIPQ13075 1403 aa12.59□□□□□ -0.39
CALD1-202ENST00000361901 SPAG9O60271 1321 aaKnown RBP12.59□□□□□ -0.39
CALD1-202ENST00000361901 UGGT2Q9NYU1 1516 aa12.59□□□□□ -0.39
CALD1-202ENST00000361901 DEKP35659 375 aaKnown RBP12.59□□□□□ -0.39
CALD1-202ENST00000361901 KIF3BO15066 747 aa12.59□□□□□ -0.39
CALD1-202ENST00000361901 UACAQ9BZF9 1416 aa12.59□□□□□ -0.39
CALD1-202ENST00000361901 CARD11Q9BXL7 1154 aa12.59□□□□□ -0.39
CALD1-202ENST00000361901 KIAA0556O60303 1618 aa12.58□□□□□ -0.39
CALD1-202ENST00000361901 CEP170Q5SW79 1584 aa12.58□□□□□ -0.4
CALD1-202ENST00000361901 TIMELESSQ9UNS1 1208 aa12.58□□□□□ -0.4
CALD1-202ENST00000361901 HFM1A2PYH4 1435 aa12.57□□□□□ -0.4
CALD1-202ENST00000361901 PTPN23Q9H3S7 1636 aa12.57□□□□□ -0.4
CALD1-202ENST00000361901 SAMD9Q5K651 1589 aa12.57□□□□□ -0.4
CALD1-202ENST00000361901 MIA2Q96PC5 1412 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 FAM9BQ8IZU0 186 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 KIF15Q9NS87 1388 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 NUP160Q12769 1436 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 ATP10BO94823 1461 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 DAPK1P53355 1430 aa12.56□□□□□ -0.4
CALD1-202ENST00000361901 MLECQ14165 292 aa12.55□□□□□ -0.4
CALD1-202ENST00000361901 NBR1Q14596 966 aa12.55□□□□□ -0.4
CALD1-202ENST00000361901 MAGI3Q5TCQ9 1506 aa12.55□□□□□ -0.4
CALD1-202ENST00000361901 RAPGEF6Q8TEU7 1601 aa12.55□□□□□ -0.4
CALD1-202ENST00000361901 FKBP8Q14318 412 aa12.54□□□□□ -0.4
CALD1-202ENST00000361901 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
CALD1-202ENST00000361901 SALL2Q9Y467 1007 aaPredicted RBP12.54□□□□□ -0.4
CALD1-202ENST00000361901 ABCC5O15440 1437 aa12.54□□□□□ -0.4
CALD1-202ENST00000361901 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
CALD1-202ENST00000361901 STAG3Q9UJ98 1225 aa12.53□□□□□ -0.4
CALD1-202ENST00000361901 ARHGAP5Q13017 1502 aa12.53□□□□□ -0.4
CALD1-202ENST00000361901 CFAP43Q8NDM7 1665 aa12.53□□□□□ -0.4
CALD1-202ENST00000361901 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.53□□□□□ -0.4
CALD1-202ENST00000361901 RBM19Q9Y4C8 960 aaKnown RBP12.52□□□□□ -0.4
CALD1-202ENST00000361901 ESF1Q9H501 851 aaKnown RBP12.52□□□□□ -0.41
CALD1-202ENST00000361901 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
CALD1-202ENST00000361901 CAMSAP2Q08AD1 1489 aa12.5□□□□□ -0.41
CALD1-202ENST00000361901 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
CALD1-202ENST00000361901 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
CALD1-202ENST00000361901 MRS2Q9HD23 443 aa12.48□□□□□ -0.41
CALD1-202ENST00000361901 ARID4BQ4LE39 1312 aaPredicted RBP12.47□□□□□ -0.41
CALD1-202ENST00000361901 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
CALD1-202ENST00000361901 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
CALD1-202ENST00000361901 FAM69CQ0P6D2 419 aa12.47□□□□□ -0.41
CALD1-202ENST00000361901 NBPF8Q3BBV2 869 aa12.46□□□□□ -0.41
CALD1-202ENST00000361901 RAPGEF3O95398 923 aa12.45□□□□□ -0.42
CALD1-202ENST00000361901 GLIPR1L2Q4G1C9 344 aa12.45□□□□□ -0.42
CALD1-202ENST00000361901 NCOA1Q15788 1441 aa12.45□□□□□ -0.42
CALD1-202ENST00000361901 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
CALD1-202ENST00000361901 KANK1Q14678 1352 aa12.43□□□□□ -0.42
CALD1-202ENST00000361901 SCAPERQ9BY12 1400 aa12.43□□□□□ -0.42
CALD1-202ENST00000361901 KIF14Q15058 1648 aa12.42□□□□□ -0.42
CALD1-202ENST00000361901 PKNOX2Q96KN3 472 aa12.42□□□□□ -0.42
CALD1-202ENST00000361901 AKNAQ7Z591 1439 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 UBE2Q2Q8WVN8 375 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 WASHC2CQ9Y4E1 1318 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 ERCC6L2Q5T890 1561 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 TMC1Q8TDI8 760 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 CCDC144AA2RUR9 1427 aa12.41□□□□□ -0.42
CALD1-202ENST00000361901 ROCK2O75116 1388 aaKnown RBP12.4□□□□□ -0.42
CALD1-202ENST00000361901 CHD1O14646 1710 aa12.4□□□□□ -0.43
CALD1-202ENST00000361901 ROCK1Q13464 1354 aa12.4□□□□□ -0.43
CALD1-202ENST00000361901 SAFB2Q14151 953 aaKnown RBP eCLIP12.39□□□□□ -0.43
CALD1-202ENST00000361901 ERICH6BQ5W0A0 696 aa12.39□□□□□ -0.43
CALD1-202ENST00000361901 PODXL2Q9NZ53 605 aa12.37□□□□□ -0.43
CALD1-202ENST00000361901 IRX6P78412 446 aaPredicted RBP12.37□□□□□ -0.43
CALD1-202ENST00000361901 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
CALD1-202ENST00000361901 CCDC141Q6ZP82 1450 aa12.36□□□□□ -0.43
CALD1-202ENST00000361901 ANKRD30BQ9BXX2 1392 aa12.36□□□□□ -0.43
CALD1-202ENST00000361901 KIAA1107Q9UPP5 1409 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 171.2 ms