RNA–Protein interactions for RNA: ENST00000361642.9

ZEB1-202, Transcript of zinc finger E-box binding homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZEB1, Length 5,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-202ENST00000361642 THEMISQ8N1K5 641 aaPredicted RBP7.54□□□□□ -1.2
ZEB1-202ENST00000361642 SF3B2Q13435 895 aaKnown RBP7.54□□□□□ -1.2
ZEB1-202ENST00000361642 CNTLNQ9NXG0 1405 aa7.54□□□□□ -1.2
ZEB1-202ENST00000361642 CHGAP10645 457 aaKnown RBP7.54□□□□□ -1.2
ZEB1-202ENST00000361642 ARHGAP5Q13017 1502 aa7.53□□□□□ -1.2
ZEB1-202ENST00000361642 UHRF1BP1Q6BDS2 1440 aa7.53□□□□□ -1.2
ZEB1-202ENST00000361642 ABCA8O94911 1581 aa7.53□□□□□ -1.2
ZEB1-202ENST00000361642 CFAP43Q8NDM7 1665 aa7.53□□□□□ -1.2
ZEB1-202ENST00000361642 ADCY10Q96PN6 1610 aa7.52□□□□□ -1.2
ZEB1-202ENST00000361642 PKD2Q13563 968 aa7.52□□□□□ -1.2
ZEB1-202ENST00000361642 EHBP1L1Q8N3D4 1523 aa7.52□□□□□ -1.21
ZEB1-202ENST00000361642 KDM5BQ9UGL1 1544 aa7.52□□□□□ -1.21
ZEB1-202ENST00000361642 DISP3Q9P2K9 1392 aa7.52□□□□□ -1.21
ZEB1-202ENST00000361642 UBAP1LF5GYI3 381 aa7.52□□□□□ -1.21
ZEB1-202ENST00000361642 ANKLE2Q86XL3 938 aa7.52□□□□□ -1.21
ZEB1-202ENST00000361642 EPRSP07814 1512 aaKnown RBP7.51□□□□□ -1.21
ZEB1-202ENST00000361642 HMGB2P26583 209 aaKnown RBP7.51□□□□□ -1.21
ZEB1-202ENST00000361642 NEO1Q92859 1461 aa7.51□□□□□ -1.21
ZEB1-202ENST00000361642 GGT6Q6P531 493 aa7.5□□□□□ -1.21
ZEB1-202ENST00000361642 TROQ12816 1431 aaPredicted RBP7.5□□□□□ -1.21
ZEB1-202ENST00000361642 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.49□□□□□ -1.21
ZEB1-202ENST00000361642 ERCC6L2Q5T890 1561 aa7.49□□□□□ -1.21
ZEB1-202ENST00000361642 WASHC2CQ9Y4E1 1318 aa7.49□□□□□ -1.21
ZEB1-202ENST00000361642 ARHGAP35Q9NRY4 1499 aa7.48□□□□□ -1.21
ZEB1-202ENST00000361642 ITSN2Q9NZM3 1697 aa7.48□□□□□ -1.21
ZEB1-202ENST00000361642 MAGI3Q5TCQ9 1506 aa7.48□□□□□ -1.21
ZEB1-202ENST00000361642 FAM50AQ14320 339 aaKnown RBP7.48□□□□□ -1.21
ZEB1-202ENST00000361642 VPS8Q8N3P4 1428 aa7.47□□□□□ -1.21
ZEB1-202ENST00000361642 DIP2BQ9P265 1576 aa7.47□□□□□ -1.21
ZEB1-202ENST00000361642 CERKQ8TCT0 537 aa7.47□□□□□ -1.21
ZEB1-202ENST00000361642 ATP10BO94823 1461 aa7.47□□□□□ -1.21
ZEB1-202ENST00000361642 SUPT6HQ7KZ85 1726 aaKnown RBP7.47□□□□□ -1.21
ZEB1-202ENST00000361642 A0A0G2JS52 829 aa7.46□□□□□ -1.22
ZEB1-202ENST00000361642 MYT1Q01538 1121 aa7.46□□□□□ -1.22
ZEB1-202ENST00000361642 ZNF326Q5BKZ1 582 aaKnown RBP7.46□□□□□ -1.22
ZEB1-202ENST00000361642 ADGRL1O94910 1474 aa7.45□□□□□ -1.22
ZEB1-202ENST00000361642 TSPOAP1O95153 1857 aa7.45□□□□□ -1.22
ZEB1-202ENST00000361642 ATF3P18847 181 aa7.45□□□□□ -1.22
ZEB1-202ENST00000361642 PIP4K2BP78356 416 aa7.45□□□□□ -1.22
ZEB1-202ENST00000361642 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
ZEB1-202ENST00000361642 MYO5CQ9NQX4 1742 aa7.44□□□□□ -1.22
ZEB1-202ENST00000361642 PLCH2O75038 1416 aa7.43□□□□□ -1.22
ZEB1-202ENST00000361642 NUP153P49790 1475 aaKnown RBP7.43□□□□□ -1.22
ZEB1-202ENST00000361642 LMTK3Q96Q04 1460 aa7.43□□□□□ -1.22
ZEB1-202ENST00000361642 SCAPERQ9BY12 1400 aa7.43□□□□□ -1.22
ZEB1-202ENST00000361642 TRIM52Q96A61 297 aa7.43□□□□□ -1.22
ZEB1-202ENST00000361642 MAGI2Q86UL8 1455 aa7.43□□□□□ -1.22
ZEB1-202ENST00000361642 MAP3K4Q9Y6R4 1608 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 C9orf84Q5VXU9 1444 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 ZNF518AQ6AHZ1 1483 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 LOC105371045A0A1W2PR82 267 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 ARAP3Q8WWN8 1544 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 CDK13Q14004 1512 aaKnown RBP7.42□□□□□ -1.22
ZEB1-202ENST00000361642 ZFYVE16Q7Z3T8 1539 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 ABCA9Q8IUA7 1624 aa7.42□□□□□ -1.22
ZEB1-202ENST00000361642 MAP3K1Q13233 1512 aa7.41□□□□□ -1.22
ZEB1-202ENST00000361642 KIF3BO15066 747 aa7.41□□□□□ -1.22
ZEB1-202ENST00000361642 ILDR1Q86SU0 546 aaPredicted RBP7.4□□□□□ -1.22
ZEB1-202ENST00000361642 ANKRD30AQ9BXX3 1397 aa7.39□□□□□ -1.23
ZEB1-202ENST00000361642 RAPGEF3O95398 923 aa7.39□□□□□ -1.23
ZEB1-202ENST00000361642 SENP3Q9H4L4 574 aaPredicted RBP7.39□□□□□ -1.23
ZEB1-202ENST00000361642 PTPRKQ15262 1439 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 PROSER2Q86WR7 435 aaPredicted RBP7.38□□□□□ -1.23
ZEB1-202ENST00000361642 ATP10AO60312 1499 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 MYOM3Q5VTT5 1437 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 MIA2Q96PC5 1412 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 FAM135AQ9P2D6 1515 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 NGLY1Q96IV0 654 aa7.38□□□□□ -1.23
ZEB1-202ENST00000361642 CCDC9Q9Y3X0 531 aaKnown RBP7.37□□□□□ -1.23
ZEB1-202ENST00000361642 TIAM1Q13009 1591 aa7.37□□□□□ -1.23
ZEB1-202ENST00000361642 KIAA1107Q9UPP5 1409 aa7.36□□□□□ -1.23
ZEB1-202ENST00000361642 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
ZEB1-202ENST00000361642 LRRC9Q6ZRR7 1453 aa7.36□□□□□ -1.23
ZEB1-202ENST00000361642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.36□□□□□ -1.23
ZEB1-202ENST00000361642 CCDC141Q6ZP82 1450 aa7.35□□□□□ -1.23
ZEB1-202ENST00000361642 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.234e-6■■■■□ 20.1
ZEB1-202ENST00000361642 PREX2Q70Z35 1606 aa7.35□□□□□ -1.23
ZEB1-202ENST00000361642 ZNF772Q68DY9 489 aaPredicted RBP7.35□□□□□ -1.23
ZEB1-202ENST00000361642 KIF13AQ9H1H9 1805 aa7.35□□□□□ -1.23
ZEB1-202ENST00000361642 HECW2Q9P2P5 1572 aa7.34□□□□□ -1.23
ZEB1-202ENST00000361642 ITGAEP38570 1179 aa7.34□□□□□ -1.23
ZEB1-202ENST00000361642 MSH6P52701 1360 aa7.34□□□□□ -1.24
ZEB1-202ENST00000361642 YEATS2Q9ULM3 1422 aa7.33□□□□□ -1.24
ZEB1-202ENST00000361642 RTEL1-TNFRSF6BF6WH68 1400 aa7.33□□□□□ -1.24
ZEB1-202ENST00000361642 SLC4A1APQ9BWU0 796 aaKnown RBP7.33□□□□□ -1.24
ZEB1-202ENST00000361642 TXNDC2Q86VQ3 553 aa7.32□□□□□ -1.24
ZEB1-202ENST00000361642 TNRQ92752 1358 aa7.32□□□□□ -1.24
ZEB1-202ENST00000361642 CAMSAP2Q08AD1 1489 aa7.32□□□□□ -1.24
ZEB1-202ENST00000361642 TRAPPC8Q9Y2L5 1435 aa7.31□□□□□ -1.24
ZEB1-202ENST00000361642 ARHGEF40Q8TER5 1519 aa7.31□□□□□ -1.24
ZEB1-202ENST00000361642 HSPA2P54652 639 aa7.31□□□□□ -1.24
ZEB1-202ENST00000361642 PSME1Q06323 249 aa7.31□□□□□ -1.24
ZEB1-202ENST00000361642 TTC37Q6PGP7 1564 aa7.31□□□□□ -1.24
ZEB1-202ENST00000361642 NUTM2BA6NNL0 878 aaPredicted RBP7.3□□□□□ -1.24
ZEB1-202ENST00000361642 NUTM2EB1AL46 878 aaPredicted RBP7.3□□□□□ -1.24
ZEB1-202ENST00000361642 NUTM2DQ5VT03 806 aaPredicted RBP7.3□□□□□ -1.24
ZEB1-202ENST00000361642 NUTM2AQ8IVF1 878 aaPredicted RBP7.3□□□□□ -1.24
ZEB1-202ENST00000361642 LRPPRCP42704 1394 aaKnown RBP7.3□□□□□ -1.24
ZEB1-202ENST00000361642 ZMYM4Q5VZL5 1548 aa7.3□□□□□ -1.24
ZEB1-202ENST00000361642 ABCC1P33527 1531 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms