RNA–Protein interactions for RNA: ENST00000361339.9

IFT140-201, Transcript of intraflagellar transport 140, humanhuman

TSL 1 (best) BASIC

Gene IFT140, Length 2,987 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-201ENST00000361339 NEFLP07196 543 aa22.72■■□□□ 1.23
IFT140-201ENST00000361339 ZNF777Q9ULD5 760 aaPredicted RBP22.71■■□□□ 1.23
IFT140-201ENST00000361339 MIA2Q96PC5 1412 aa22.69■■□□□ 1.22
IFT140-201ENST00000361339 CEP170Q5SW79 1584 aa22.68■■□□□ 1.22
IFT140-201ENST00000361339 ABCC5O15440 1437 aa22.68■■□□□ 1.22
IFT140-201ENST00000361339 DAPK1P53355 1430 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 GCC2Q8IWJ2 1684 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 L3MBTL2Q969R5 705 aa22.67■■□□□ 1.22
IFT140-201ENST00000361339 RAPGEF6Q8TEU7 1601 aa22.66■■□□□ 1.22
IFT140-201ENST00000361339 HSPA5P11021 654 aaKnown RBP22.65■■□□□ 1.22
IFT140-201ENST00000361339 ANP32CO43423 234 aa22.65■■□□□ 1.22
IFT140-201ENST00000361339 MSH5O43196 834 aa22.63■■□□□ 1.21
IFT140-201ENST00000361339 JPH4Q96JJ6 628 aa22.63■■□□□ 1.21
IFT140-201ENST00000361339 IRX6P78412 446 aaPredicted RBP22.6■■□□□ 1.21
IFT140-201ENST00000361339 CFDP1Q9UEE9 299 aaPredicted RBP22.6■■□□□ 1.21
IFT140-201ENST00000361339 ERICH6Q7L0X2 663 aa22.6■■□□□ 1.21
IFT140-201ENST00000361339 WASHC2AQ641Q2 1341 aa22.6■■□□□ 1.21
IFT140-201ENST00000361339 SYNJ2O15056 1496 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 NBPF8Q3BBV2 869 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 SLC4A1APQ9BWU0 796 aaKnown RBP22.58■■□□□ 1.21
IFT140-201ENST00000361339 KIF14Q15058 1648 aa22.58■■□□□ 1.21
IFT140-201ENST00000361339 AKNAQ7Z591 1439 aa22.58■■□□□ 1.2
IFT140-201ENST00000361339 C11orf95C9JLR9 678 aaPredicted RBP22.58■■□□□ 1.2
IFT140-201ENST00000361339 CDK11AQ9UQ88 783 aaPredicted RBP22.58■■□□□ 1.2
IFT140-201ENST00000361339 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
IFT140-201ENST00000361339 TROQ12816 1431 aaPredicted RBP22.55■■□□□ 1.2
IFT140-201ENST00000361339 DNMT1P26358 1616 aaKnown RBP22.54■■□□□ 1.2
IFT140-201ENST00000361339 ANKRD30BQ9BXX2 1392 aa22.53■■□□□ 1.2
IFT140-201ENST00000361339 CAMSAP2Q08AD1 1489 aa22.53■■□□□ 1.2
IFT140-201ENST00000361339 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.2
IFT140-201ENST00000361339 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
IFT140-201ENST00000361339 ROCK1Q13464 1354 aa22.5■■□□□ 1.19
IFT140-201ENST00000361339 EIF4G2P78344 907 aaKnown RBP eCLIP22.49■■□□□ 1.19
IFT140-201ENST00000361339 CCDC184Q52MB2 194 aa22.48■■□□□ 1.19
IFT140-201ENST00000361339 NUP160Q12769 1436 aa22.48■■□□□ 1.19
IFT140-201ENST00000361339 ZNF326Q5BKZ1 582 aaKnown RBP22.45■■□□□ 1.18
IFT140-201ENST00000361339 NCOA1Q15788 1441 aa22.45■■□□□ 1.18
IFT140-201ENST00000361339 CARMIL2Q6F5E8 1435 aa22.45■■□□□ 1.18
IFT140-201ENST00000361339 CNGB1Q14028 1251 aaPredicted RBP22.44■■□□□ 1.18
IFT140-201ENST00000361339 PZPP20742 1482 aa22.44■■□□□ 1.18
IFT140-201ENST00000361339 RPRD2Q5VT52 1461 aaKnown RBP22.43■■□□□ 1.18
IFT140-201ENST00000361339 TEX14Q8IWB6 1497 aa22.42■■□□□ 1.18
IFT140-201ENST00000361339 PLEKHD1A6NEE1 506 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 ATP10BO94823 1461 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 PKD2Q13563 968 aa22.41■■□□□ 1.18
IFT140-201ENST00000361339 HNRNPMP52272 730 aaKnown RBP eCLIP22.39■■□□□ 1.18
IFT140-201ENST00000361339 HNRNPUQ00839 825 aaKnown RBP eCLIP22.38■■□□□ 1.17
IFT140-201ENST00000361339 CCDC7Q96M83 1385 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 POLR3GLQ9BT43 218 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 ABCA8O94911 1581 aa22.34■■□□□ 1.17
IFT140-201ENST00000361339 ITSN2Q9NZM3 1697 aa22.32■■□□□ 1.16
IFT140-201ENST00000361339 KIF7Q2M1P5 1343 aa22.32■■□□□ 1.16
IFT140-201ENST00000361339 ANKRD50Q9ULJ7 1429 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ABCC10Q5T3U5 1492 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ADCY10Q96PN6 1610 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 ANKRD30AQ9BXX3 1397 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 CNTLNQ9NXG0 1405 aa22.31■■□□□ 1.16
IFT140-201ENST00000361339 CDC42BPAQ5VT25 1732 aa22.3■■□□□ 1.16
IFT140-201ENST00000361339 PRKCSHP14314 528 aaPredicted RBP22.29■■□□□ 1.16
IFT140-201ENST00000361339 NUP155O75694 1391 aa22.29■■□□□ 1.16
IFT140-201ENST00000361339 PTPRGP23470 1445 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 NBR1Q14596 966 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 C9orf84Q5VXU9 1444 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 KIAA1107Q9UPP5 1409 aa22.28■■□□□ 1.16
IFT140-201ENST00000361339 FAM9BQ8IZU0 186 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 SENP3-EIF4A1A0A087X0R7 540 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 SPATA31E1Q6ZUB1 1445 aa22.27■■□□□ 1.16
IFT140-201ENST00000361339 ADGRL2O95490 1459 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 CROCC2H7BZ55 1655 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 PRKRIP1Q9H875 184 aaPredicted RBP22.26■■□□□ 1.15
IFT140-201ENST00000361339 ADGBQ8N7X0 1667 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 DEKP35659 375 aaKnown RBP22.26■■□□□ 1.15
IFT140-201ENST00000361339 KDM2AQ9Y2K7 1162 aa22.26■■□□□ 1.15
IFT140-201ENST00000361339 TSPY4P0CV99 314 aa22.23■■□□□ 1.15
IFT140-201ENST00000361339 TSPY10P0CW01 314 aa22.23■■□□□ 1.15
IFT140-201ENST00000361339 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.15
IFT140-201ENST00000361339 KIF15Q9NS87 1388 aa22.2■■□□□ 1.14
IFT140-201ENST00000361339 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
IFT140-201ENST00000361339 MBD5Q9P267 1494 aa22.18■■□□□ 1.14
IFT140-201ENST00000361339 USP47Q96K76 1375 aa22.18■■□□□ 1.14
IFT140-201ENST00000361339 FANCIQ9NVI1 1328 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 CHD1O14646 1710 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 BCORL1Q5H9F3 1711 aa22.15■■□□□ 1.14
IFT140-201ENST00000361339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.15■■□□□ 1.14
IFT140-201ENST00000361339 DCAF11Q8TEB1 546 aa22.13■■□□□ 1.13
IFT140-201ENST00000361339 SAMD9LQ8IVG5 1584 aa22.13■■□□□ 1.13
IFT140-201ENST00000361339 B4GALNT3Q6L9W6 998 aa22.12■■□□□ 1.13
IFT140-201ENST00000361339 ANO8Q9HCE9 1232 aaPredicted RBP22.1■■□□□ 1.13
IFT140-201ENST00000361339 CDC42BPBQ9Y5S2 1711 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 RGL3Q3MIN7 710 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 CARD11Q9BXL7 1154 aa22.1■■□□□ 1.13
IFT140-201ENST00000361339 SHANK2Q9UPX8 1470 aa22.09■■□□□ 1.13
IFT140-201ENST00000361339 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
IFT140-201ENST00000361339 SYCP2Q9BX26 1530 aa22.08■■□□□ 1.12
IFT140-201ENST00000361339 DHX29Q7Z478 1369 aaKnown RBP22.07■■□□□ 1.12
IFT140-201ENST00000361339 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
IFT140-201ENST00000361339 CCDC141Q6ZP82 1450 aa22.05■■□□□ 1.12
IFT140-201ENST00000361339 ARHGAP5Q13017 1502 aa22.04■■□□□ 1.12
IFT140-201ENST00000361339 KDM5CP41229 1560 aa22.03■■□□□ 1.12
IFT140-201ENST00000361339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms