RNA–Protein interactions for RNA: ENST00000360093.7

SCN3A-202, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN3A, Length 9,123 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-202ENST00000360093 RALBP1Q15311 655 aa6.3□□□□□ -1.4
SCN3A-202ENST00000360093 KIF21BO75037 1637 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 PRDM2Q13029 1718 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 ERICH3Q5RHP9 1530 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 MORC1Q86VD1 984 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 OSCARQ8IYS5 282 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 MLECQ14165 292 aa6.29□□□□□ -1.4
SCN3A-202ENST00000360093 EID1Q9Y6B2 187 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 KIF3BO15066 747 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 CC2D1BQ5T0F9 858 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 CFTRP13569 1480 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 GOLGA6L22H0YM25 854 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 U2SURPO15042 1029 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 LMOD2Q6P5Q4 547 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 WASHC2CQ9Y4E1 1318 aa6.28□□□□□ -1.4
SCN3A-202ENST00000360093 NCLP19338 710 aaKnown RBP6.28□□□□□ -1.4
SCN3A-202ENST00000360093 HNRNPMP52272 730 aaKnown RBP eCLIP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 SENP3Q9H4L4 574 aaPredicted RBP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 GRIN2BQ13224 1484 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 IGF1RP08069 1367 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 PPP4R2Q9NY27 417 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 HSPA5P11021 654 aaKnown RBP6.27□□□□□ -1.41
SCN3A-202ENST00000360093 CC2D2AQ9P2K1 1620 aa6.27□□□□□ -1.41
SCN3A-202ENST00000360093 TERF2IPQ9NYB0 399 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 LAS1LQ9Y4W2 734 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 STAC3Q96MF2 364 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 CCDC144AA2RUR9 1427 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 MYOM3Q5VTT5 1437 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
SCN3A-202ENST00000360093 SUPT16HQ9Y5B9 1047 aaKnown RBP6.26□□□□□ -1.41
SCN3A-202ENST00000360093 MRC2Q9UBG0 1479 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 EFCAB5A4FU69 1503 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 IPO8O15397 1037 aaKnown RBP6.25□□□□□ -1.41
SCN3A-202ENST00000360093 NEUROD2Q15784 382 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 PLEKHG5O94827 1062 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 TOP2BQ02880 1626 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 PHLDB1Q86UU1 1377 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 IFT140Q96RY7 1462 aa6.25□□□□□ -1.41
SCN3A-202ENST00000360093 TNNT2P45379 298 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-202ENST00000360093 RUSC2Q8N2Y8 1516 aa6.24□□□□□ -1.41
SCN3A-202ENST00000360093 IRX6P78412 446 aaPredicted RBP6.24□□□□□ -1.41
SCN3A-202ENST00000360093 RAD54L2Q9Y4B4 1467 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 ARXQ96QS3 562 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 STK26Q9P289 416 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 VGFO15240 615 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-202ENST00000360093 HDAC5Q9UQL6 1122 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 CASKIN1Q8WXD9 1431 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 FYCO1Q9BQS8 1478 aa6.23□□□□□ -1.41
SCN3A-202ENST00000360093 FRAT1Q92837 279 aaPredicted RBP6.23□□□□□ -1.41
SCN3A-202ENST00000360093 LAMC3Q9Y6N6 1575 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 DNMBPQ6XZF7 1577 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 NPHP1O15259 732 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 FOXD1Q16676 465 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 CDK11BP21127 795 aaKnown RBP6.22□□□□□ -1.41
SCN3A-202ENST00000360093 OS9Q13438 667 aaPredicted RBP6.22□□□□□ -1.41
SCN3A-202ENST00000360093 L3MBTL2Q969R5 705 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 LMOD3Q0VAK6 560 aa6.22□□□□□ -1.41
SCN3A-202ENST00000360093 ZRSR1Q15695 479 aaKnown RBP6.21□□□□□ -1.41
SCN3A-202ENST00000360093 KIF15Q9NS87 1388 aa6.21□□□□□ -1.42
SCN3A-202ENST00000360093 LRRC9Q6ZRR7 1453 aa6.21□□□□□ -1.42
SCN3A-202ENST00000360093 SAFB2Q14151 953 aaKnown RBP eCLIP6.21□□□□□ -1.42
SCN3A-202ENST00000360093 GOLGA2Q08379 1002 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 NLRP13Q86W25 1043 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 MCCP23508 829 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PDE3BQ13370 1112 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 FGD6Q6ZV73 1430 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 SYNJ1O43426 1573 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 CUL7Q14999 1698 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 HECW1Q76N89 1606 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 TOPBP1Q92547 1522 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PLEKHH2Q8IVE3 1493 aa6.2□□□□□ -1.42
SCN3A-202ENST00000360093 PAK3O75914 559 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 U2AF1L5P0DN76 240 aaPredicted RBP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 U2AF1Q01081 240 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 EVC2Q86UK5 1308 aa6.19□□□□□ -1.42
SCN3A-202ENST00000360093 AQRO60306 1485 aaKnown RBP eCLIP6.19□□□□□ -1.42
SCN3A-202ENST00000360093 EHBP1L1Q8N3D4 1523 aa6.19□□□□□ -1.42
SCN3A-202ENST00000360093 NGEFQ8N5V2 710 aa6.18□□□□□ -1.42
SCN3A-202ENST00000360093 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 SUPT6HQ7KZ85 1726 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 NGDNQ8NEJ9 315 aaKnown RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 TRIM44Q96DX7 344 aaPredicted RBP6.18□□□□□ -1.42
SCN3A-202ENST00000360093 CYB5RLQ6IPT4 315 aa6.18□□□□□ -1.42
SCN3A-202ENST00000360093 NBR1Q14596 966 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 ARHGAP5Q13017 1502 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 KCNJ4P48050 445 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 RCAN3Q9UKA8 241 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 PMFBP1Q8TBY8 1022 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 RWDD1Q9H446 243 aaPredicted RBP6.17□□□□□ -1.42
SCN3A-202ENST00000360093 CGNL1Q0VF96 1302 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 CSB-PGBD3P0DP91 1061 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 MYBBP1AQ9BQG0 1328 aaKnown RBP6.17□□□□□ -1.42
SCN3A-202ENST00000360093 NCOA2Q15596 1464 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 SOX12O15370 315 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 FGD1P98174 961 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 STK31Q9BXU1 1019 aa6.17□□□□□ -1.42
SCN3A-202ENST00000360093 UNC13AQ9UPW8 1703 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms